RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 TSEN34Q9BSV6 310 aaKnown RBP24.88■■□□□ 1.57
CPSF7-209ENST00000463244 TEX13BQ9BXU2 312 aa24.88■■□□□ 1.57
CPSF7-209ENST00000463244 SYNGAP1Q96PV0 1343 aa24.87■■□□□ 1.57
CPSF7-209ENST00000463244 SNRNP48Q6IEG0 339 aaKnown RBP24.87■■□□□ 1.57
CPSF7-209ENST00000463244 ANKRD33Q7Z3H0 272 aa24.87■■□□□ 1.57
CPSF7-209ENST00000463244 TOX2Q96NM4 488 aa24.87■■□□□ 1.57
CPSF7-209ENST00000463244 NUP88Q99567 741 aaPredicted RBP24.87■■□□□ 1.57
CPSF7-209ENST00000463244 TMEM39AQ9NV64 488 aa24.87■■□□□ 1.57
CPSF7-209ENST00000463244 SYNRGQ9UMZ2 1314 aa24.86■■□□□ 1.57
CPSF7-209ENST00000463244 MYH4Q9Y623 1939 aa24.86■■□□□ 1.57
CPSF7-209ENST00000463244 TMEM265A0A087WTH1 108 aa24.86■■□□□ 1.57
CPSF7-209ENST00000463244 RASA1P20936 1047 aa24.86■■□□□ 1.57
CPSF7-209ENST00000463244 SBK1Q52WX2 424 aa24.86■■□□□ 1.57
CPSF7-209ENST00000463244 MAMDC4Q6UXC1 1216 aa24.86■■□□□ 1.57
CPSF7-209ENST00000463244 STRBPQ96SI9 672 aaKnown RBP24.86■■□□□ 1.57
CPSF7-209ENST00000463244 NYAP2Q9P242 653 aa24.86■■□□□ 1.57
CPSF7-209ENST00000463244 MCM3APO60318 1980 aa24.85■■□□□ 1.57
CPSF7-209ENST00000463244 DNAJC25-GNG10A0A024R161 153 aa24.85■■□□□ 1.57
CPSF7-209ENST00000463244 SNAI1O95863 264 aaPredicted RBP24.85■■□□□ 1.57
CPSF7-209ENST00000463244 ACLYP53396 1101 aa24.85■■□□□ 1.57
CPSF7-209ENST00000463244 FPGSQ05932 587 aa24.85■■□□□ 1.57
CPSF7-209ENST00000463244 FAAP100Q0VG06 881 aa24.85■■□□□ 1.57
CPSF7-209ENST00000463244 KLHDC9Q8NEP7 349 aa24.85■■□□□ 1.57
CPSF7-209ENST00000463244 STARD7Q9NQZ5 370 aa24.85■■□□□ 1.57
CPSF7-209ENST00000463244 FAM184BQ9ULE4 1060 aa24.85■■□□□ 1.57
CPSF7-209ENST00000463244 RIPK3Q9Y572 518 aa24.85■■□□□ 1.57
CPSF7-209ENST00000463244 MOXD2PA6NHM9 499 aa24.84■■□□□ 1.57
CPSF7-209ENST00000463244 F5H6K3 240 aa24.84■■□□□ 1.57
CPSF7-209ENST00000463244 ATP2A1O14983 1001 aa24.84■■□□□ 1.57
CPSF7-209ENST00000463244 NDUFB10O96000 172 aa24.84■■□□□ 1.57
CPSF7-209ENST00000463244 FOSL2P15408 326 aa24.84■■□□□ 1.57
CPSF7-209ENST00000463244 KLRC3Q07444 240 aa24.84■■□□□ 1.57
CPSF7-209ENST00000463244 CCSAPQ6IQ19 270 aaPredicted RBP24.84■■□□□ 1.57
CPSF7-209ENST00000463244 MIER1Q8N108 512 aa24.84■■□□□ 1.57
CPSF7-209ENST00000463244 PRPF38AQ8NAV1 312 aaKnown RBP24.84■■□□□ 1.57
CPSF7-209ENST00000463244 NUP133Q8WUM0 1156 aa24.84■■□□□ 1.57
CPSF7-209ENST00000463244 DDX11Q96FC9 970 aa24.84■■□□□ 1.57
CPSF7-209ENST00000463244 LRRCC1Q9C099 1032 aa24.84■■□□□ 1.57
CPSF7-209ENST00000463244 CHMP4BQ9H444 224 aaKnown RBP24.84■■□□□ 1.57
CPSF7-209ENST00000463244 CHD9Q3L8U1 2897 aa24.84■■□□□ 1.57
CPSF7-209ENST00000463244 GSG1L2A8MUP6 293 aa24.83■■□□□ 1.57
CPSF7-209ENST00000463244 DCDC2CA8MYV0 355 aa24.83■■□□□ 1.57
CPSF7-209ENST00000463244 GIMAP6Q6P9H5 292 aa24.83■■□□□ 1.57
CPSF7-209ENST00000463244 MKNK2Q9HBH9 465 aa24.83■■□□□ 1.57
CPSF7-209ENST00000463244 DUSP11O75319 330 aaKnown RBP24.82■■□□□ 1.56
CPSF7-209ENST00000463244 KCNA10Q16322 511 aa24.82■■□□□ 1.56
CPSF7-209ENST00000463244 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.82■■□□□ 1.56
CPSF7-209ENST00000463244 ZNF467Q7Z7K2 595 aaPredicted RBP24.82■■□□□ 1.56
CPSF7-209ENST00000463244 STK11IPQ8N1F8 1099 aa24.82■■□□□ 1.56
CPSF7-209ENST00000463244 ZHX1Q9UKY1 873 aaPredicted RBP24.82■■□□□ 1.56
CPSF7-209ENST00000463244 MYO9BQ13459 2157 aa24.81■■□□□ 1.56
CPSF7-209ENST00000463244 MYADML2A6NDP7 307 aa24.81■■□□□ 1.56
CPSF7-209ENST00000463244 SMARCA5O60264 1052 aaPredicted RBP24.81■■□□□ 1.56
CPSF7-209ENST00000463244 TBX21Q9UL17 535 aa24.81■■□□□ 1.56
CPSF7-209ENST00000463244 IGKV6D-41A0A0C4DH26 115 aa24.8■■□□□ 1.56
CPSF7-209ENST00000463244 MINDY4BA8MYZ0 360 aa24.8■■□□□ 1.56
CPSF7-209ENST00000463244 ZBED4O75132 1171 aa24.8■■□□□ 1.56
CPSF7-209ENST00000463244 TIMP1P01033 207 aa24.8■■□□□ 1.56
CPSF7-209ENST00000463244 CST5P28325 142 aaPredicted RBP24.8■■□□□ 1.56
CPSF7-209ENST00000463244 CPXCR1Q8N123 301 aa24.8■■□□□ 1.56
CPSF7-209ENST00000463244 SLC38A10Q9HBR0 1119 aa24.8■■□□□ 1.56
CPSF7-209ENST00000463244 ECHDC1Q9NTX5 307 aa24.8■■□□□ 1.56
CPSF7-209ENST00000463244 ELP1O95163 1332 aa24.8■■□□□ 1.56
CPSF7-209ENST00000463244 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.79■■□□□ 1.56
CPSF7-209ENST00000463244 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.79■■□□□ 1.56
CPSF7-209ENST00000463244 ADCY6O43306 1168 aa24.79■■□□□ 1.56
CPSF7-209ENST00000463244 ACVR2BQ13705 512 aa24.79■■□□□ 1.56
CPSF7-209ENST00000463244 KBTBD3Q8NAB2 608 aa24.79■■□□□ 1.56
CPSF7-209ENST00000463244 OSBP2Q969R2 916 aa24.79■■□□□ 1.56
CPSF7-209ENST00000463244 FGD4Q96M96 766 aa24.79■■□□□ 1.56
CPSF7-209ENST00000463244 GLT1D1Q96MS3 346 aa24.79■■□□□ 1.56
CPSF7-209ENST00000463244 ABHD16BQ9H3Z7 469 aa24.79■■□□□ 1.56
CPSF7-209ENST00000463244 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.79■■□□□ 1.56
CPSF7-209ENST00000463244 CLIP2Q9UDT6 1046 aa24.79■■□□□ 1.56
CPSF7-209ENST00000463244 MROH7Q68CQ1 1323 aa24.79■■□□□ 1.56
CPSF7-209ENST00000463244 DNAJB2P25686 324 aa24.78■■□□□ 1.56
CPSF7-209ENST00000463244 SLC4A3P48751 1232 aa24.78■■□□□ 1.56
CPSF7-209ENST00000463244 PCSK9Q8NBP7 692 aaKnown RBP24.78■■□□□ 1.56
CPSF7-209ENST00000463244 APPBP2Q92624 585 aa24.78■■□□□ 1.56
CPSF7-209ENST00000463244 MKL1Q969V6 931 aa24.78■■□□□ 1.56
CPSF7-209ENST00000463244 KIFC2Q96AC6 838 aa24.78■■□□□ 1.56
CPSF7-209ENST00000463244 RAVER2Q9HCJ3 691 aaKnown RBP24.78■■□□□ 1.56
CPSF7-209ENST00000463244 EPB41L4AQ9HCS5 686 aaPredicted RBP24.78■■□□□ 1.56
CPSF7-209ENST00000463244 CTDP1Q9Y5B0 961 aaPredicted RBP24.78■■□□□ 1.56
CPSF7-209ENST00000463244 ASGR1P07306 291 aa24.77■■□□□ 1.56
CPSF7-209ENST00000463244 C6orf222P0C671 652 aaPredicted RBP24.77■■□□□ 1.56
CPSF7-209ENST00000463244 CDK7P50613 346 aa24.77■■□□□ 1.56
CPSF7-209ENST00000463244 IRX5P78411 483 aaPredicted RBP24.77■■□□□ 1.56
CPSF7-209ENST00000463244 GRIN2CQ14957 1233 aa24.77■■□□□ 1.56
CPSF7-209ENST00000463244 CCDC144BQ3MJ40 725 aa24.77■■□□□ 1.56
CPSF7-209ENST00000463244 MFSD5Q6N075 450 aa24.77■■□□□ 1.56
CPSF7-209ENST00000463244 ANKRD35Q8N283 1001 aa24.77■■□□□ 1.56
CPSF7-209ENST00000463244 CHST13Q8NET6 341 aa24.77■■□□□ 1.56
CPSF7-209ENST00000463244 CEP95Q96GE4 821 aa24.77■■□□□ 1.56
CPSF7-209ENST00000463244 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.77■■□□□ 1.562e-7■■■■□ 22.5
CPSF7-209ENST00000463244 UPF3AQ9H1J1 476 aaKnown RBP24.77■■□□□ 1.56
CPSF7-209ENST00000463244 FBXO40Q9UH90 709 aa24.77■■□□□ 1.56
CPSF7-209ENST00000463244 FEM1BQ9UK73 627 aa24.77■■□□□ 1.56
CPSF7-209ENST00000463244 SYNPO2Q9UMS6 1093 aa24.77■■□□□ 1.56
CPSF7-209ENST00000463244 CHD7Q9P2D1 2997 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms