RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 RBM5P52756 815 aaKnown RBP eCLIP11.59□□□□□ -0.55
MSH5-211ENST00000463144 SHROOM1Q2M3G4 852 aaPredicted RBP11.59□□□□□ -0.55
MSH5-211ENST00000463144 SPATA20Q8TB22 786 aa11.59□□□□□ -0.55
MSH5-211ENST00000463144 RRP36Q96EU6 259 aaKnown RBP11.59□□□□□ -0.55
MSH5-211ENST00000463144 EHD4Q9H223 541 aa11.59□□□□□ -0.55
MSH5-211ENST00000463144 MYH4Q9Y623 1939 aa11.59□□□□□ -0.55
MSH5-211ENST00000463144 CCDC194A0A1B0GVG4 234 aa11.58□□□□□ -0.55
MSH5-211ENST00000463144 FAM196BA6NMK8 535 aa11.58□□□□□ -0.55
MSH5-211ENST00000463144 SMTNL1A8MU46 457 aa11.58□□□□□ -0.55
MSH5-211ENST00000463144 TTLL1O95922 423 aa11.58□□□□□ -0.55
MSH5-211ENST00000463144 LRMPQ12912 555 aa11.58□□□□□ -0.55
MSH5-211ENST00000463144 INF2Q27J81 1249 aa11.58□□□□□ -0.55
MSH5-211ENST00000463144 FAM177A1Q8N128 213 aaPredicted RBP11.58□□□□□ -0.55
MSH5-211ENST00000463144 HOOK1Q9UJC3 728 aaKnown RBP11.58□□□□□ -0.55
MSH5-211ENST00000463144 SERPINA10Q9UK55 444 aa11.58□□□□□ -0.55
MSH5-211ENST00000463144 C10orf71Q711Q0 1435 aa11.58□□□□□ -0.56
MSH5-211ENST00000463144 SMCO2A6NFE2 343 aa11.58□□□□□ -0.56
MSH5-211ENST00000463144 SLFN14P0C7P3 912 aa11.58□□□□□ -0.56
MSH5-211ENST00000463144 KCNA3P22001 575 aa11.58□□□□□ -0.56
MSH5-211ENST00000463144 CASP1P29466 404 aa11.58□□□□□ -0.56
MSH5-211ENST00000463144 NAPAP54920 295 aa11.58□□□□□ -0.56
MSH5-211ENST00000463144 MORC3Q14149 939 aa11.58□□□□□ -0.56
MSH5-211ENST00000463144 CC2D2BQ6DHV5 1058 aa11.58□□□□□ -0.56
MSH5-211ENST00000463144 KANK3Q6NY19 840 aa11.58□□□□□ -0.56
MSH5-211ENST00000463144 KIAA1524Q8TCG1 905 aa11.58□□□□□ -0.56
MSH5-211ENST00000463144 PAGE5Q96GU1 130 aa11.58□□□□□ -0.56
MSH5-211ENST00000463144 TMEM60Q9H2L4 133 aa11.58□□□□□ -0.56
MSH5-211ENST00000463144 PSME4Q14997 1843 aa11.57□□□□□ -0.56
MSH5-211ENST00000463144 PPIP5K2O43314 1243 aa11.57□□□□□ -0.56
MSH5-211ENST00000463144 LMOD1P29536 600 aaPredicted RBP11.57□□□□□ -0.56
MSH5-211ENST00000463144 ZNF543Q08ER8 600 aa11.57□□□□□ -0.56
MSH5-211ENST00000463144 ARID5BQ14865 1188 aa11.57□□□□□ -0.56
MSH5-211ENST00000463144 NOLC1Q14978 699 aaKnown RBP eCLIP11.57□□□□□ -0.56
MSH5-211ENST00000463144 E2F4Q16254 413 aa11.57□□□□□ -0.56
MSH5-211ENST00000463144 ASPRV1Q53RT3 343 aa11.57□□□□□ -0.56
MSH5-211ENST00000463144 ARL6IP4Q66PJ3 421 aaKnown RBP11.57□□□□□ -0.56
MSH5-211ENST00000463144 TTBK2Q6IQ55 1244 aa11.57□□□□□ -0.56
MSH5-211ENST00000463144 CACTINQ8WUQ7 758 aaKnown RBP11.57□□□□□ -0.56
MSH5-211ENST00000463144 SMARCE1Q969G3 411 aa11.57□□□□□ -0.56
MSH5-211ENST00000463144 TDRD3Q9H7E2 651 aaKnown RBP11.57□□□□□ -0.56
MSH5-211ENST00000463144 GPCPD1Q9NPB8 672 aa11.57□□□□□ -0.56
MSH5-211ENST00000463144 MPHOSPH10O00566 681 aaKnown RBP11.57□□□□□ -0.56
MSH5-211ENST00000463144 NPM3O75607 178 aaKnown RBP11.57□□□□□ -0.56
MSH5-211ENST00000463144 ATP1A3P13637 1013 aa11.57□□□□□ -0.56
MSH5-211ENST00000463144 CDC25AP30304 524 aa11.57□□□□□ -0.56
MSH5-211ENST00000463144 AFMP43652 599 aa11.57□□□□□ -0.56
MSH5-211ENST00000463144 PRMT6Q96LA8 375 aaPredicted RBP11.57□□□□□ -0.56
MSH5-211ENST00000463144 MED15Q96RN5 788 aa11.57□□□□□ -0.56
MSH5-211ENST00000463144 XPO4Q9C0E2 1151 aaKnown RBP11.57□□□□□ -0.56
MSH5-211ENST00000463144 DHX36Q9H2U1 1008 aaKnown RBP11.57□□□□□ -0.56
MSH5-211ENST00000463144 IFNKQ9P0W0 207 aa11.57□□□□□ -0.56
MSH5-211ENST00000463144 SEC63Q9UGP8 760 aaKnown RBP11.57□□□□□ -0.56
MSH5-211ENST00000463144 COL4A5P29400 1685 aa11.57□□□□□ -0.56
MSH5-211ENST00000463144 MYL5Q02045 173 aa11.56□□□□□ -0.56
MSH5-211ENST00000463144 SIAH1Q8IUQ4 282 aa11.56□□□□□ -0.56
MSH5-211ENST00000463144 TTLL6Q8N841 843 aa11.56□□□□□ -0.56
MSH5-211ENST00000463144 SUPT20HQ8NEM7 779 aa11.56□□□□□ -0.56
MSH5-211ENST00000463144 COA7Q96BR5 231 aa11.56□□□□□ -0.56
MSH5-211ENST00000463144 CCDC17Q96LX7 622 aa11.56□□□□□ -0.56
MSH5-211ENST00000463144 MTRQ99707 1265 aa11.56□□□□□ -0.56
MSH5-211ENST00000463144 JMJD4Q9H9V9 463 aa11.56□□□□□ -0.56
MSH5-211ENST00000463144 SPTLC3Q9NUV7 552 aa11.56□□□□□ -0.56
MSH5-211ENST00000463144 PI4KBQ9UBF8 816 aa11.56□□□□□ -0.56
MSH5-211ENST00000463144 SOCS7O14512 581 aa11.56□□□□□ -0.56
MSH5-211ENST00000463144 PPP1R11O60927 126 aaPredicted RBP11.56□□□□□ -0.56
MSH5-211ENST00000463144 LONP1P36776 959 aaKnown RBP11.56□□□□□ -0.56
MSH5-211ENST00000463144 FANCCQ00597 558 aa11.56□□□□□ -0.56
MSH5-211ENST00000463144 FMR1Q06787 632 aaKnown RBP eCLIP11.56□□□□□ -0.56
MSH5-211ENST00000463144 DPYDQ12882 1025 aa11.56□□□□□ -0.56
MSH5-211ENST00000463144 CFAP100Q494V2 611 aa11.56□□□□□ -0.56
MSH5-211ENST00000463144 TATDN1Q6P1N9 297 aa11.56□□□□□ -0.56
MSH5-211ENST00000463144 PDXDC2PQ6P474 469 aa11.56□□□□□ -0.56
MSH5-211ENST00000463144 ADGRF4Q8IZF3 695 aa11.56□□□□□ -0.56
MSH5-211ENST00000463144 CCDC12Q8WUD4 166 aaPredicted RBP11.56□□□□□ -0.56
MSH5-211ENST00000463144 STAMQ92783 540 aa11.56□□□□□ -0.56
MSH5-211ENST00000463144 C6orf50Q9HD87 102 aa11.56□□□□□ -0.56
MSH5-211ENST00000463144 ESYT2A0FGR8 921 aa11.55□□□□□ -0.56
MSH5-211ENST00000463144 EDIL3O43854 480 aa11.55□□□□□ -0.56
MSH5-211ENST00000463144 DPEP1P16444 411 aa11.55□□□□□ -0.56
MSH5-211ENST00000463144 GNA11P29992 359 aa11.55□□□□□ -0.56
MSH5-211ENST00000463144 SLC16A2P36021 539 aa11.55□□□□□ -0.56
MSH5-211ENST00000463144 ATP2B2Q01814 1243 aa11.55□□□□□ -0.56
MSH5-211ENST00000463144 CERKLQ49MI3 558 aaPredicted RBP11.55□□□□□ -0.56
MSH5-211ENST00000463144 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.55□□□□□ -0.56
MSH5-211ENST00000463144 KRT25Q7Z3Z0 450 aa11.55□□□□□ -0.56
MSH5-211ENST00000463144 TRIML1Q8N9V2 468 aa11.55□□□□□ -0.56
MSH5-211ENST00000463144 MLKLQ8NB16 471 aa11.55□□□□□ -0.56
MSH5-211ENST00000463144 DPF2Q92785 391 aa11.55□□□□□ -0.56
MSH5-211ENST00000463144 FANCLQ9NW38 375 aa11.55□□□□□ -0.56
MSH5-211ENST00000463144 TMEM260Q9NX78 707 aa11.55□□□□□ -0.56
MSH5-211ENST00000463144 BIN2Q9UBW5 565 aaPredicted RBP11.55□□□□□ -0.56
MSH5-211ENST00000463144 PP2D1A8MPX8 630 aa11.55□□□□□ -0.56
MSH5-211ENST00000463144 EEF2P13639 858 aaKnown RBP11.55□□□□□ -0.56
MSH5-211ENST00000463144 JAG1P78504 1218 aa11.55□□□□□ -0.56
MSH5-211ENST00000463144 SOGA3Q5TF21 947 aa11.55□□□□□ -0.56
MSH5-211ENST00000463144 JAKMIP3Q5VZ66 844 aa11.55□□□□□ -0.56
MSH5-211ENST00000463144 KCTD1Q719H9 257 aa11.55□□□□□ -0.56
MSH5-211ENST00000463144 ZSCAN29Q8IWY8 852 aaPredicted RBP11.55□□□□□ -0.56
MSH5-211ENST00000463144 MKL1Q969V6 931 aa11.55□□□□□ -0.56
MSH5-211ENST00000463144 NAP1L5Q96NT1 182 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms