RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 ERVK-24P63145 666 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 CAP1Q01518 475 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 APOBRQ0VD83 1088 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 FAM110CQ1W6H9 321 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 WDR78Q5VTH9 848 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 LBX2Q6XYB7 198 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 FAM160B2Q86V87 743 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 CPXCR1Q8N123 301 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 GTF3C2Q8WUA4 911 aaPredicted RBP23.66■■□□□ 1.38
NUP43-205ENST00000463048 BRF1Q92994 677 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 MTA3Q9BTC8 594 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 BACH2Q9BYV9 841 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 BRPF3Q9ULD4 1205 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 PRR12Q9ULL5 1215 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 RABGAP1Q9Y3P9 1069 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 SLC12A7Q9Y666 1083 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 KLF18A0A0U1RQI7 1052 aa23.65■■□□□ 1.38
NUP43-205ENST00000463048 DHX16O60231 1041 aaKnown RBP23.65■■□□□ 1.38
NUP43-205ENST00000463048 ZBED4O75132 1171 aa23.65■■□□□ 1.38
NUP43-205ENST00000463048 LACTBP83111 547 aaPredicted RBP23.65■■□□□ 1.38
NUP43-205ENST00000463048 KIF22Q14807 665 aa23.65■■□□□ 1.38
NUP43-205ENST00000463048 TMEM132BQ14DG7 1078 aa23.65■■□□□ 1.38
NUP43-205ENST00000463048 SYDE2Q5VT97 1194 aa23.65■■□□□ 1.38
NUP43-205ENST00000463048 CCDC174Q6PII3 467 aa23.65■■□□□ 1.38
NUP43-205ENST00000463048 MICU3Q86XE3 530 aa23.65■■□□□ 1.38
NUP43-205ENST00000463048 CCAR1Q8IX12 1150 aaKnown RBP23.65■■□□□ 1.38
NUP43-205ENST00000463048 TMTC2Q8N394 836 aa23.65■■□□□ 1.38
NUP43-205ENST00000463048 TM6SF1Q9BZW5 370 aa23.65■■□□□ 1.38
NUP43-205ENST00000463048 VAT1LQ9HCJ6 419 aa23.65■■□□□ 1.38
NUP43-205ENST00000463048 PDRG1Q9NUG6 133 aa23.65■■□□□ 1.38
NUP43-205ENST00000463048 MORF4L1Q9UBU8 362 aa23.65■■□□□ 1.38
NUP43-205ENST00000463048 MYPNQ86TC9 1320 aa23.64■■□□□ 1.38
NUP43-205ENST00000463048 FMNL1O95466 1100 aaPredicted RBP23.64■■□□□ 1.37
NUP43-205ENST00000463048 CTGFP29279 349 aa23.64■■□□□ 1.37
NUP43-205ENST00000463048 PSMC4P43686 418 aa23.64■■□□□ 1.37
NUP43-205ENST00000463048 TROAPQ12815 778 aa23.64■■□□□ 1.37
NUP43-205ENST00000463048 GRM4Q14833 912 aa23.64■■□□□ 1.37
NUP43-205ENST00000463048 ASPRV1Q53RT3 343 aa23.64■■□□□ 1.37
NUP43-205ENST00000463048 GPATCH4Q5T3I0 446 aaKnown RBP23.64■■□□□ 1.37
NUP43-205ENST00000463048 SYNE3Q6ZMZ3 975 aa23.64■■□□□ 1.37
NUP43-205ENST00000463048 ERO1AQ96HE7 468 aa23.64■■□□□ 1.37
NUP43-205ENST00000463048 PORCNQ9H237 461 aa23.64■■□□□ 1.37
NUP43-205ENST00000463048 CWC22Q9HCG8 908 aaKnown RBP23.64■■□□□ 1.37
NUP43-205ENST00000463048 RAVER2Q9HCJ3 691 aaKnown RBP23.64■■□□□ 1.37
NUP43-205ENST00000463048 MAD2L2Q9UI95 211 aa23.64■■□□□ 1.37
NUP43-205ENST00000463048 A0A0G2JMZ2 1700 aa23.64■■□□□ 1.37
NUP43-205ENST00000463048 TAL1P17542 331 aaPredicted RBP23.63■■□□□ 1.37
NUP43-205ENST00000463048 NOM1Q5C9Z4 860 aaKnown RBP23.63■■□□□ 1.37
NUP43-205ENST00000463048 NOL8Q76FK4 1167 aaKnown RBP23.63■■□□□ 1.37
NUP43-205ENST00000463048 EFCC1Q9HA90 598 aa23.63■■□□□ 1.37
NUP43-205ENST00000463048 KLRF2D3W0D1 207 aa23.62■■□□□ 1.37
NUP43-205ENST00000463048 DDAH1O94760 285 aa23.62■■□□□ 1.37
NUP43-205ENST00000463048 APOA5Q6Q788 366 aa23.62■■□□□ 1.37
NUP43-205ENST00000463048 SGMS1Q86VZ5 419 aa23.62■■□□□ 1.37
NUP43-205ENST00000463048 MB21D1Q8N884 522 aa23.62■■□□□ 1.37
NUP43-205ENST00000463048 CTCFLQ8NI51 663 aaPredicted RBP23.62■■□□□ 1.37
NUP43-205ENST00000463048 PIBF1Q8WXW3 757 aa23.62■■□□□ 1.37
NUP43-205ENST00000463048 TRIM47Q96LD4 638 aa23.62■■□□□ 1.37
NUP43-205ENST00000463048 MOV10L1Q9BXT6 1211 aaKnown RBP23.62■■□□□ 1.37
NUP43-205ENST00000463048 SPATC1LQ9H0A9 340 aa23.62■■□□□ 1.37
NUP43-205ENST00000463048 ADAMTS5Q9UNA0 930 aa23.62■■□□□ 1.37
NUP43-205ENST00000463048 TOB2Q14106 344 aaPredicted RBP23.61■■□□□ 1.37
NUP43-205ENST00000463048 SNRNP48Q6IEG0 339 aaKnown RBP23.61■■□□□ 1.37
NUP43-205ENST00000463048 BTNL9Q6UXG8 535 aa23.61■■□□□ 1.37
NUP43-205ENST00000463048 NCAPG2Q86XI2 1143 aa23.61■■□□□ 1.37
NUP43-205ENST00000463048 CMTR1Q8N1G2 835 aaKnown RBP23.61■■□□□ 1.37
NUP43-205ENST00000463048 REPS2Q8NFH8 660 aa23.61■■□□□ 1.37
NUP43-205ENST00000463048 SLC38A10Q9HBR0 1119 aa23.61■■□□□ 1.37
NUP43-205ENST00000463048 TRIM17Q9Y577 477 aa23.61■■□□□ 1.37
NUP43-205ENST00000463048 PALM3A6NDB9 673 aaPredicted RBP23.6■■□□□ 1.37
NUP43-205ENST00000463048 GOLGA8BA8MQT2 603 aa23.6■■□□□ 1.37
NUP43-205ENST00000463048 TNPO2O14787 897 aaKnown RBP23.6■■□□□ 1.37
NUP43-205ENST00000463048 ZBTB43O43298 467 aa23.6■■□□□ 1.37
NUP43-205ENST00000463048 PLA2G6O60733 806 aa23.6■■□□□ 1.37
NUP43-205ENST00000463048 STAT3P40763 770 aa23.6■■□□□ 1.37
NUP43-205ENST00000463048 NEK4P51957 841 aa23.6■■□□□ 1.37
NUP43-205ENST00000463048 FCGRTP55899 365 aa23.6■■□□□ 1.37
NUP43-205ENST00000463048 CCNA1P78396 465 aa23.6■■□□□ 1.37
NUP43-205ENST00000463048 ADGRF4Q8IZF3 695 aa23.6■■□□□ 1.37
NUP43-205ENST00000463048 AGBL1Q96MI9 1066 aa23.6■■□□□ 1.37
NUP43-205ENST00000463048 PRDM10Q9NQV6 1147 aa23.6■■□□□ 1.37
NUP43-205ENST00000463048 MGAMO43451 1857 aa23.6■■□□□ 1.37
NUP43-205ENST00000463048 GOLGA8AA7E2F4 631 aa23.59■■□□□ 1.37
NUP43-205ENST00000463048 PLEKHA8P1O95397 391 aa23.59■■□□□ 1.37
NUP43-205ENST00000463048 NBPF11Q86T75 865 aa23.59■■□□□ 1.37
NUP43-205ENST00000463048 CCDC82Q8N4S0 544 aa23.59■■□□□ 1.37
NUP43-205ENST00000463048 HOMER2Q9NSB8 354 aa23.59■■□□□ 1.37
NUP43-205ENST00000463048 ZNF214Q9UL59 606 aaPredicted RBP23.59■■□□□ 1.37
NUP43-205ENST00000463048 CALM1P0DP23 149 aa23.58■■□□□ 1.37
NUP43-205ENST00000463048 CALM2P0DP24 149 aa23.58■■□□□ 1.37
NUP43-205ENST00000463048 CALM3P0DP25 149 aa23.58■■□□□ 1.37
NUP43-205ENST00000463048 ERCC3P19447 782 aa23.58■■□□□ 1.37
NUP43-205ENST00000463048 KIF5BP33176 963 aa23.58■■□□□ 1.37
NUP43-205ENST00000463048 OTOP1Q7RTM1 612 aa23.58■■□□□ 1.37
NUP43-205ENST00000463048 HOMER1Q86YM7 354 aa23.58■■□□□ 1.37
NUP43-205ENST00000463048 FANCBQ8NB91 859 aa23.58■■□□□ 1.37
NUP43-205ENST00000463048 RIPK3Q9Y572 518 aa23.58■■□□□ 1.37
NUP43-205ENST00000463048 RBM25P49756 843 aaKnown RBP23.57■■□□□ 1.36
NUP43-205ENST00000463048 STK3Q13188 491 aa23.57■■□□□ 1.36
NUP43-205ENST00000463048 RTN1Q16799 776 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms