RNA–Protein interactions for RNA: ENST00000462996.1

PTPN18-208, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-208ENST00000462996 ELP1O95163 1332 aa24.35■■□□□ 1.49
PTPN18-208ENST00000462996 BAZ2AQ9UIF9 1905 aaKnown RBP24.35■■□□□ 1.49
PTPN18-208ENST00000462996 TCF20Q9UGU0 1960 aaKnown RBP24.35■■□□□ 1.49
PTPN18-208ENST00000462996 EEF2P13639 858 aaKnown RBP24.35■■□□□ 1.49
PTPN18-208ENST00000462996 CCDC174Q6PII3 467 aa24.35■■□□□ 1.49
PTPN18-208ENST00000462996 GLT1D1Q96MS3 346 aa24.35■■□□□ 1.49
PTPN18-208ENST00000462996 MROH7Q68CQ1 1323 aa24.35■■□□□ 1.49
PTPN18-208ENST00000462996 GBF1Q92538 1859 aa24.34■■□□□ 1.49
PTPN18-208ENST00000462996 ADCY6O43306 1168 aa24.34■■□□□ 1.49
PTPN18-208ENST00000462996 PRKAB2O43741 272 aa24.34■■□□□ 1.49
PTPN18-208ENST00000462996 DUSP11O75319 330 aaKnown RBP24.34■■□□□ 1.49
PTPN18-208ENST00000462996 IGFBP4P22692 258 aa24.34■■□□□ 1.49
PTPN18-208ENST00000462996 TTF1Q15361 905 aaPredicted RBP24.34■■□□□ 1.49
PTPN18-208ENST00000462996 TMEM199Q8N511 208 aa24.34■■□□□ 1.49
PTPN18-208ENST00000462996 MSL3Q8N5Y2 521 aaKnown RBP24.34■■□□□ 1.49
PTPN18-208ENST00000462996 CCDC17Q96LX7 622 aa24.34■■□□□ 1.49
PTPN18-208ENST00000462996 PPP1R12CQ9BZL4 782 aa24.34■■□□□ 1.49
PTPN18-208ENST00000462996 ZHX1Q9UKY1 873 aaPredicted RBP24.34■■□□□ 1.49
PTPN18-208ENST00000462996 SYNGAP1Q96PV0 1343 aa24.34■■□□□ 1.49
PTPN18-208ENST00000462996 CYP2D7A0A087X1C5 515 aa24.33■■□□□ 1.49
PTPN18-208ENST00000462996 ASGR1P07306 291 aa24.33■■□□□ 1.49
PTPN18-208ENST00000462996 CST5P28325 142 aaPredicted RBP24.33■■□□□ 1.49
PTPN18-208ENST00000462996 CDK8P49336 464 aa24.33■■□□□ 1.49
PTPN18-208ENST00000462996 MAMDC4Q6UXC1 1216 aa24.33■■□□□ 1.49
PTPN18-208ENST00000462996 FAM122AQ96E09 287 aa24.33■■□□□ 1.49
PTPN18-208ENST00000462996 ARMT1Q9H993 441 aa24.33■■□□□ 1.49
PTPN18-208ENST00000462996 CXXC1Q9P0U4 656 aaPredicted RBP24.33■■□□□ 1.49
PTPN18-208ENST00000462996 DNAJC25-GNG10A0A024R161 153 aa24.32■■□□□ 1.48
PTPN18-208ENST00000462996 ARVCFO00192 962 aa24.32■■□□□ 1.48
PTPN18-208ENST00000462996 COPB2P35606 906 aa24.32■■□□□ 1.48
PTPN18-208ENST00000462996 FAM83BQ5T0W9 1011 aa24.32■■□□□ 1.48
PTPN18-208ENST00000462996 ZKSCAN2Q63HK3 967 aa24.32■■□□□ 1.48
PTPN18-208ENST00000462996 PSRC1Q6PGN9 363 aaPredicted RBP24.32■■□□□ 1.48
PTPN18-208ENST00000462996 FAM126BQ8IXS8 530 aa24.32■■□□□ 1.48
PTPN18-208ENST00000462996 VTI1AQ96AJ9 217 aa24.32■■□□□ 1.48
PTPN18-208ENST00000462996 NKX2-4Q9H2Z4 354 aa24.32■■□□□ 1.48
PTPN18-208ENST00000462996 MSRAQ9UJ68 235 aa24.32■■□□□ 1.48
PTPN18-208ENST00000462996 EXOC6BQ9Y2D4 811 aa24.32■■□□□ 1.48
PTPN18-208ENST00000462996 RIPK3Q9Y572 518 aa24.32■■□□□ 1.48
PTPN18-208ENST00000462996 MCM3APO60318 1980 aa24.32■■□□□ 1.48
PTPN18-208ENST00000462996 C6orf222P0C671 652 aaPredicted RBP24.31■■□□□ 1.48
PTPN18-208ENST00000462996 RAB30Q15771 203 aa24.31■■□□□ 1.48
PTPN18-208ENST00000462996 SLFNL1Q499Z3 407 aa24.31■■□□□ 1.48
PTPN18-208ENST00000462996 HERVK_113Q902F9 699 aa24.31■■□□□ 1.48
PTPN18-208ENST00000462996 NECAB3Q96P71 396 aaPredicted RBP24.31■■□□□ 1.48
PTPN18-208ENST00000462996 YBX2Q9Y2T7 364 aaKnown RBP24.31■■□□□ 1.48
PTPN18-208ENST00000462996 A0A0U1RQG5 324 aaPredicted RBP24.3■■□□□ 1.48
PTPN18-208ENST00000462996 GOLIM4O00461 696 aa24.3■■□□□ 1.48
PTPN18-208ENST00000462996 CYP2C18P33260 490 aa24.3■■□□□ 1.48
PTPN18-208ENST00000462996 ACVR2BQ13705 512 aa24.3■■□□□ 1.48
PTPN18-208ENST00000462996 C12orf60Q5U649 245 aa24.3■■□□□ 1.48
PTPN18-208ENST00000462996 PCSK9Q8NBP7 692 aaKnown RBP24.3■■□□□ 1.48
PTPN18-208ENST00000462996 DDX11Q96FC9 970 aa24.3■■□□□ 1.48
PTPN18-208ENST00000462996 UPF3AQ9H1J1 476 aaKnown RBP24.3■■□□□ 1.48
PTPN18-208ENST00000462996 KANSL2Q9H9L4 492 aa24.3■■□□□ 1.48
PTPN18-208ENST00000462996 GOPCQ9HD26 462 aa24.3■■□□□ 1.48
PTPN18-208ENST00000462996 IL23AQ9NPF7 189 aa24.3■■□□□ 1.48
PTPN18-208ENST00000462996 CD4P01730 458 aa24.29■■□□□ 1.48
PTPN18-208ENST00000462996 GJA9P57773 515 aa24.29■■□□□ 1.48
PTPN18-208ENST00000462996 C16orf86Q6ZW13 317 aa24.29■■□□□ 1.48
PTPN18-208ENST00000462996 IL27Q8NEV9 243 aa24.29■■□□□ 1.48
PTPN18-208ENST00000462996 IL1RAPL2Q9NP60 686 aa24.29■■□□□ 1.48
PTPN18-208ENST00000462996 ATP8A2Q9NTI2 1148 aa24.29■■□□□ 1.48
PTPN18-208ENST00000462996 TRANK1O15050 2925 aa24.29■■□□□ 1.48
PTPN18-208ENST00000462996 APBB1O00213 710 aa24.28■■□□□ 1.48
PTPN18-208ENST00000462996 RAD21O60216 631 aa24.28■■□□□ 1.48
PTPN18-208ENST00000462996 BMP1P13497 986 aa24.28■■□□□ 1.48
PTPN18-208ENST00000462996 CCDC144BQ3MJ40 725 aa24.28■■□□□ 1.48
PTPN18-208ENST00000462996 GNASQ5JWF2 1037 aa24.28■■□□□ 1.48
PTPN18-208ENST00000462996 SNRNP48Q6IEG0 339 aaKnown RBP24.28■■□□□ 1.48
PTPN18-208ENST00000462996 ZNF467Q7Z7K2 595 aaPredicted RBP24.28■■□□□ 1.48
PTPN18-208ENST00000462996 FGD4Q96M96 766 aa24.28■■□□□ 1.48
PTPN18-208ENST00000462996 NUP88Q99567 741 aaPredicted RBP24.28■■□□□ 1.48
PTPN18-208ENST00000462996 TEX13BQ9BXU2 312 aa24.28■■□□□ 1.48
PTPN18-208ENST00000462996 SLC28A3Q9HAS3 691 aa24.28■■□□□ 1.48
PTPN18-208ENST00000462996 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.28■■□□□ 1.48
PTPN18-208ENST00000462996 USP17L12C9JPN9 530 aa24.27■■□□□ 1.48
PTPN18-208ENST00000462996 USP17L21D6R901 530 aa24.27■■□□□ 1.48
PTPN18-208ENST00000462996 CTAGE5O15320 804 aa24.27■■□□□ 1.48
PTPN18-208ENST00000462996 MBD4O95243 580 aa24.27■■□□□ 1.48
PTPN18-208ENST00000462996 CEP85Q6P2H3 762 aa24.27■■□□□ 1.48
PTPN18-208ENST00000462996 ERC1Q8IUD2 1116 aa24.27■■□□□ 1.48
PTPN18-208ENST00000462996 DNAJC2Q99543 621 aaKnown RBP24.27■■□□□ 1.48
PTPN18-208ENST00000462996 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.27■■□□□ 1.48
PTPN18-208ENST00000462996 TLR3O15455 904 aaKnown RBP24.26■■□□□ 1.47
PTPN18-208ENST00000462996 FGBP02675 491 aa24.26■■□□□ 1.47
PTPN18-208ENST00000462996 SLF1Q9BQI6 1058 aa24.26■■□□□ 1.47
PTPN18-208ENST00000462996 ABHD16BQ9H3Z7 469 aa24.26■■□□□ 1.47
PTPN18-208ENST00000462996 SPC25Q9HBM1 224 aa24.26■■□□□ 1.47
PTPN18-208ENST00000462996 UMODL1Q5DID0 1318 aa24.26■■□□□ 1.47
PTPN18-208ENST00000462996 RLBP1P12271 317 aa24.25■■□□□ 1.47
PTPN18-208ENST00000462996 TFF2Q03403 129 aa24.25■■□□□ 1.47
PTPN18-208ENST00000462996 ITPRIPQ8IWB1 547 aa24.25■■□□□ 1.47
PTPN18-208ENST00000462996 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.25■■□□□ 1.47
PTPN18-208ENST00000462996 HOXD11P31277 338 aaPredicted RBP24.24■■□□□ 1.47
PTPN18-208ENST00000462996 ADD2P35612 726 aa24.24■■□□□ 1.47
PTPN18-208ENST00000462996 SLC4A3P48751 1232 aa24.24■■□□□ 1.47
PTPN18-208ENST00000462996 RABGGTBP53611 331 aa24.24■■□□□ 1.47
PTPN18-208ENST00000462996 OTOP2Q7RTS6 562 aa24.24■■□□□ 1.47
PTPN18-208ENST00000462996 SLC43A3Q8NBI5 491 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms