RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 ITIH2P19823 946 aa4.28□□□□□ -1.72
CD46-210ENST00000462968 HMGB2P26583 209 aaKnown RBP4.28□□□□□ -1.72
CD46-210ENST00000462968 EIF1AXP47813 144 aaKnown RBP4.28□□□□□ -1.72
CD46-210ENST00000462968 PDE3AQ14432 1141 aa4.28□□□□□ -1.72
CD46-210ENST00000462968 TMEM67Q5HYA8 995 aa4.28□□□□□ -1.72
CD46-210ENST00000462968 SPACA3Q8IXA5 215 aa4.28□□□□□ -1.72
CD46-210ENST00000462968 DDX54Q8TDD1 881 aaKnown RBP4.28□□□□□ -1.72
CD46-210ENST00000462968 WDR89Q96FK6 387 aaPredicted RBP4.28□□□□□ -1.72
CD46-210ENST00000462968 CSRNP1Q96S65 589 aa4.28□□□□□ -1.72
CD46-210ENST00000462968 C14orf93Q9H972 538 aaKnown RBP4.28□□□□□ -1.72
CD46-210ENST00000462968 PIDD1Q9HB75 910 aa4.28□□□□□ -1.72
CD46-210ENST00000462968 POLIQ9UNA4 740 aa4.28□□□□□ -1.72
CD46-210ENST00000462968 PCDHGC5Q9Y5F6 944 aa4.28□□□□□ -1.72
CD46-210ENST00000462968 PXDNLA1KZ92 1463 aa4.28□□□□□ -1.72
CD46-210ENST00000462968 TOPAZ1Q8N9V7 1692 aa4.28□□□□□ -1.72
CD46-210ENST00000462968 HSPA8P11142 646 aaKnown RBP4.27□□□□□ -1.73
CD46-210ENST00000462968 TGFB2P61812 414 aa4.27□□□□□ -1.73
CD46-210ENST00000462968 ID3Q02535 119 aa4.27□□□□□ -1.73
CD46-210ENST00000462968 TMEM164Q5U3C3 297 aa4.27□□□□□ -1.73
CD46-210ENST00000462968 CIAPIN1Q6FI81 312 aa4.27□□□□□ -1.73
CD46-210ENST00000462968 ATG14Q6ZNE5 492 aa4.27□□□□□ -1.73
CD46-210ENST00000462968 DBX2Q6ZNG2 339 aa4.27□□□□□ -1.73
CD46-210ENST00000462968 CYFIP1Q7L576 1253 aa4.27□□□□□ -1.73
CD46-210ENST00000462968 ZNF576Q9H609 170 aa4.27□□□□□ -1.73
CD46-210ENST00000462968 NSUN3Q9H649 340 aaKnown RBP4.27□□□□□ -1.73
CD46-210ENST00000462968 CCDC86Q9H6F5 360 aaKnown RBP4.27□□□□□ -1.73
CD46-210ENST00000462968 ZFYVE28Q9HCC9 887 aa4.27□□□□□ -1.73
CD46-210ENST00000462968 LRRC37A3O60309 1634 aa4.27□□□□□ -1.73
CD46-210ENST00000462968 COL24A1Q17RW2 1714 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 KCPQ6ZWJ8 1503 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 LMO7Q8WWI1 1683 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 CICQ96RK0 1608 aaPredicted RBP4.26□□□□□ -1.73
CD46-210ENST00000462968 IGF2BP3O00425 579 aaKnown RBP eCLIP4.26□□□□□ -1.73
CD46-210ENST00000462968 POLR3DP05423 398 aaPredicted RBP4.26□□□□□ -1.73
CD46-210ENST00000462968 TMEM253P0C7T8 217 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 LIG1P18858 919 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 MPSTP25325 297 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 KRTAP10-2P60368 255 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 SRPK2P78362 688 aaKnown RBP4.26□□□□□ -1.73
CD46-210ENST00000462968 MAP2K1Q02750 393 aaPredicted RBP4.26□□□□□ -1.73
CD46-210ENST00000462968 AP3B2Q13367 1082 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 TTLL4Q14679 1199 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 NKPD1Q17RQ9 610 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 KIF4BQ2VIQ3 1234 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 RGL3Q3MIN7 710 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 TOP6BLQ8N6T0 577 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 GCC1Q96CN9 775 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 DIRC2Q96SL1 478 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 LIN7BQ9HAP6 207 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 CCNL1Q9UK58 526 aaPredicted RBP4.26□□□□□ -1.73
CD46-210ENST00000462968 PCOLCE2Q9UKZ9 415 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 CRYBG1Q9Y4K1 1723 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 CNTNAP1P78357 1384 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 CCDC7Q96M83 1385 aa4.26□□□□□ -1.73
CD46-210ENST00000462968 SBF2Q86WG5 1849 aa4.25□□□□□ -1.73
CD46-210ENST00000462968 ACEP12821 1306 aa4.25□□□□□ -1.73
CD46-210ENST00000462968 PITPNM2Q9BZ72 1349 aa4.25□□□□□ -1.73
CD46-210ENST00000462968 A0A0G2JLW4 131 aa4.25□□□□□ -1.73
CD46-210ENST00000462968 ZNF862O60290 1169 aa4.25□□□□□ -1.73
CD46-210ENST00000462968 FOXD2O60548 495 aaPredicted RBP4.25□□□□□ -1.73
CD46-210ENST00000462968 PIK3C2GO75747 1445 aa4.25□□□□□ -1.73
CD46-210ENST00000462968 NEFMP07197 916 aa4.25□□□□□ -1.73
CD46-210ENST00000462968 SLFN14P0C7P3 912 aa4.25□□□□□ -1.73
CD46-210ENST00000462968 GLDCP23378 1020 aa4.25□□□□□ -1.73
CD46-210ENST00000462968 ITPKAP23677 461 aa4.25□□□□□ -1.73
CD46-210ENST00000462968 GDNFP39905 211 aa4.25□□□□□ -1.73
CD46-210ENST00000462968 EHHADHQ08426 723 aa4.25□□□□□ -1.73
CD46-210ENST00000462968 GALNT12Q8IXK2 581 aa4.25□□□□□ -1.73
CD46-210ENST00000462968 KCNK12Q9HB15 430 aa4.25□□□□□ -1.73
CD46-210ENST00000462968 PARD6AQ9NPB6 346 aa4.25□□□□□ -1.73
CD46-210ENST00000462968 RNF181Q9P0P0 153 aa4.25□□□□□ -1.73
CD46-210ENST00000462968 KIAA1210Q9ULL0 1709 aa4.25□□□□□ -1.73
CD46-210ENST00000462968 SMG5Q9UPR3 1016 aaKnown RBP4.25□□□□□ -1.73
CD46-210ENST00000462968 POLR3AO14802 1390 aaPredicted RBP4.25□□□□□ -1.73
CD46-210ENST00000462968 PPIP5K1Q6PFW1 1433 aa4.24□□□□□ -1.73
CD46-210ENST00000462968 A0A0G2JLL6 359 aaPredicted RBP4.24□□□□□ -1.73
CD46-210ENST00000462968 TCAF2A6NFQ2 919 aa4.24□□□□□ -1.73
CD46-210ENST00000462968 GLTPD2A6NH11 291 aa4.24□□□□□ -1.73
CD46-210ENST00000462968 ETV2O00321 342 aaPredicted RBP4.24□□□□□ -1.73
CD46-210ENST00000462968 ATG7O95352 703 aa4.24□□□□□ -1.73
CD46-210ENST00000462968 HCLS1P14317 486 aaPredicted RBP4.24□□□□□ -1.73
CD46-210ENST00000462968 IL2RBP14784 551 aa4.24□□□□□ -1.73
CD46-210ENST00000462968 USP5P45974 858 aa4.24□□□□□ -1.73
CD46-210ENST00000462968 CLCN7P51798 805 aa4.24□□□□□ -1.73
CD46-210ENST00000462968 LINC00310P59036 64 aa4.24□□□□□ -1.73
CD46-210ENST00000462968 ALKBH2Q6NS38 261 aa4.24□□□□□ -1.73
CD46-210ENST00000462968 ISL2Q96A47 359 aa4.24□□□□□ -1.73
CD46-210ENST00000462968 SYTL4Q96C24 671 aaPredicted RBP4.24□□□□□ -1.73
CD46-210ENST00000462968 KNDC1Q76NI1 1749 aa4.24□□□□□ -1.73
CD46-210ENST00000462968 NUAK1O60285 661 aa4.23□□□□□ -1.73
CD46-210ENST00000462968 RNGTTO60942 597 aaKnown RBP4.23□□□□□ -1.73
CD46-210ENST00000462968 NPR3P17342 541 aa4.23□□□□□ -1.73
CD46-210ENST00000462968 ATP2B4P23634 1241 aa4.23□□□□□ -1.73
CD46-210ENST00000462968 TPRNQ4KMQ1 711 aa4.23□□□□□ -1.73
CD46-210ENST00000462968 KIAA0319Q5VV43 1072 aa4.23□□□□□ -1.73
CD46-210ENST00000462968 ARHGEF25Q86VW2 580 aa4.23□□□□□ -1.73
CD46-210ENST00000462968 MCOLN1Q9GZU1 580 aa4.23□□□□□ -1.73
CD46-210ENST00000462968 EPB41L4BQ9H329 900 aa4.23□□□□□ -1.73
CD46-210ENST00000462968 CARS2Q9HA77 564 aaKnown RBP4.23□□□□□ -1.73
CD46-210ENST00000462968 DCP1AQ9NPI6 582 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms