RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 USP25Q9UHP3 1055 aa16.57■□□□□ 0.24
HDAC6-213ENST00000462730 ADAMTS3O15072 1205 aa16.57■□□□□ 0.24
HDAC6-213ENST00000462730 PDHBP11177 359 aa16.57■□□□□ 0.24
HDAC6-213ENST00000462730 FKBP1CQ5VVH2 108 aa16.57■□□□□ 0.24
HDAC6-213ENST00000462730 MICALL2Q8IY33 904 aa16.57■□□□□ 0.24
HDAC6-213ENST00000462730 BLIDQ8IZY5 108 aa16.57■□□□□ 0.24
HDAC6-213ENST00000462730 CCDC148Q8NFR7 591 aa16.57■□□□□ 0.24
HDAC6-213ENST00000462730 CBX8Q9HC52 389 aa16.57■□□□□ 0.24
HDAC6-213ENST00000462730 FRMPD2Q68DX3 1309 aaPredicted RBP16.56■□□□□ 0.24
HDAC6-213ENST00000462730 STXBP3O00186 592 aa16.56■□□□□ 0.24
HDAC6-213ENST00000462730 GDF11O95390 407 aa16.56■□□□□ 0.24
HDAC6-213ENST00000462730 MMP14P50281 582 aa16.56■□□□□ 0.24
HDAC6-213ENST00000462730 TTC38Q5R3I4 469 aa16.56■□□□□ 0.24
HDAC6-213ENST00000462730 TYW1BQ6NUM6 668 aa16.56■□□□□ 0.24
HDAC6-213ENST00000462730 PIK3AP1Q6ZUJ8 805 aa16.56■□□□□ 0.24
HDAC6-213ENST00000462730 ARHGAP27Q6ZUM4 889 aa16.56■□□□□ 0.24
HDAC6-213ENST00000462730 CDAN1Q8IWY9 1227 aa16.56■□□□□ 0.24
HDAC6-213ENST00000462730 ERCC4Q92889 916 aaPredicted RBP16.56■□□□□ 0.24
HDAC6-213ENST00000462730 TMEM39BQ9GZU3 492 aa16.56■□□□□ 0.24
HDAC6-213ENST00000462730 PCDHA4Q9UN74 947 aa16.56■□□□□ 0.24
HDAC6-213ENST00000462730 WNT7AO00755 349 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 ATP2B2Q01814 1243 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 GRIN1Q05586 938 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 ASPRV1Q53RT3 343 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 FAM83AQ86UY5 434 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 DPF2Q92785 391 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 RRP36Q96EU6 259 aaKnown RBP16.55■□□□□ 0.24
HDAC6-213ENST00000462730 BARHL2Q9NY43 387 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 HERC5Q9UII4 1024 aaKnown RBP16.55■□□□□ 0.24
HDAC6-213ENST00000462730 SRPRBQ9Y5M8 271 aaKnown RBP16.55■□□□□ 0.24
HDAC6-213ENST00000462730 SBF1O95248 1867 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 BMP15O95972 392 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 SMARCA1P28370 1054 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 ZNF174Q15697 407 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 SPECC1Q5M775 1068 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 RBM26Q5T8P6 1007 aaKnown RBP16.55■□□□□ 0.24
HDAC6-213ENST00000462730 TMEM179Q6ZVK1 233 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 ILDR2Q71H61 639 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 LUZP1Q86V48 1076 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 HOMER1Q86YM7 354 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 TIGD1Q96MW7 591 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 SYT17Q9BSW7 474 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 UBA5Q9GZZ9 404 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.55■□□□□ 0.24
HDAC6-213ENST00000462730 KCNH3Q9ULD8 1083 aa16.55■□□□□ 0.24
HDAC6-213ENST00000462730 MORC2Q9Y6X9 1032 aaPredicted RBP16.55■□□□□ 0.24
HDAC6-213ENST00000462730 SNHG28P0DPA3 235 aa16.54■□□□□ 0.24
HDAC6-213ENST00000462730 LMNB1P20700 586 aa16.54■□□□□ 0.24
HDAC6-213ENST00000462730 ABCB5Q2M3G0 1257 aa16.54■□□□□ 0.24
HDAC6-213ENST00000462730 PPP4R3BQ5MIZ7 849 aa16.54■□□□□ 0.24
HDAC6-213ENST00000462730 C11orf57Q6ZUT1 292 aaPredicted RBP16.54■□□□□ 0.24
HDAC6-213ENST00000462730 SAMD7Q7Z3H4 446 aa16.54■□□□□ 0.24
HDAC6-213ENST00000462730 DAGLBQ8NCG7 672 aa16.54■□□□□ 0.24
HDAC6-213ENST00000462730 VAT1LQ9HCJ6 419 aa16.54■□□□□ 0.24
HDAC6-213ENST00000462730 FAM13BQ9NYF5 915 aa16.54■□□□□ 0.24
HDAC6-213ENST00000462730 SEC63Q9UGP8 760 aaKnown RBP16.54■□□□□ 0.24
HDAC6-213ENST00000462730 CNOT7Q9UIV1 285 aaKnown RBP16.54■□□□□ 0.24
HDAC6-213ENST00000462730 R3HCC1Q9Y3T6 440 aaKnown RBP16.54■□□□□ 0.24
HDAC6-213ENST00000462730 A0A087WWV3 80 aa16.53■□□□□ 0.24
HDAC6-213ENST00000462730 CAVIN2O95810 425 aa16.53■□□□□ 0.24
HDAC6-213ENST00000462730 TRAPPC10P48553 1259 aa16.53■□□□□ 0.24
HDAC6-213ENST00000462730 ZNF165P49910 485 aa16.53■□□□□ 0.24
HDAC6-213ENST00000462730 NAPAP54920 295 aa16.53■□□□□ 0.24
HDAC6-213ENST00000462730 ICA1Q05084 483 aa16.53■□□□□ 0.24
HDAC6-213ENST00000462730 RRP1BQ14684 758 aaKnown RBP16.53■□□□□ 0.24
HDAC6-213ENST00000462730 SEPT2Q15019 361 aa16.53■□□□□ 0.24
HDAC6-213ENST00000462730 ZNF579Q8NAF0 562 aaKnown RBP16.53■□□□□ 0.24
HDAC6-213ENST00000462730 RASGRP4Q8TDF6 673 aa16.53■□□□□ 0.24
HDAC6-213ENST00000462730 PIGSQ96S52 555 aa16.53■□□□□ 0.24
HDAC6-213ENST00000462730 KANSL2Q9H9L4 492 aa16.53■□□□□ 0.24
HDAC6-213ENST00000462730 GPCPD1Q9NPB8 672 aa16.53■□□□□ 0.24
HDAC6-213ENST00000462730 ANO10Q9NW15 660 aa16.53■□□□□ 0.24
HDAC6-213ENST00000462730 KIAA1468Q9P260 1216 aa16.53■□□□□ 0.24
HDAC6-213ENST00000462730 SCAF8Q9UPN6 1271 aaKnown RBP16.53■□□□□ 0.24
HDAC6-213ENST00000462730 ADCY5O95622 1261 aa16.53■□□□□ 0.24
HDAC6-213ENST00000462730 EEF2P13639 858 aaKnown RBP16.53■□□□□ 0.24
HDAC6-213ENST00000462730 PLCB2Q00722 1185 aa16.53■□□□□ 0.24
HDAC6-213ENST00000462730 TBC1D10BQ4KMP7 808 aaPredicted RBP16.53■□□□□ 0.24
HDAC6-213ENST00000462730 GALNT17Q6IS24 598 aa16.53■□□□□ 0.24
HDAC6-213ENST00000462730 MTERF4Q7Z6M4 381 aaKnown RBP16.53■□□□□ 0.24
HDAC6-213ENST00000462730 FAM177A1Q8N128 213 aaPredicted RBP16.53■□□□□ 0.24
HDAC6-213ENST00000462730 CSRNP2Q9H175 543 aa16.53■□□□□ 0.24
HDAC6-213ENST00000462730 GH2P01242 217 aa16.52■□□□□ 0.24
HDAC6-213ENST00000462730 JAG1P78504 1218 aa16.52■□□□□ 0.24
HDAC6-213ENST00000462730 CCDC96Q2M329 555 aa16.52■□□□□ 0.24
HDAC6-213ENST00000462730 CCDC12Q8WUD4 166 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-213ENST00000462730 RIOX1Q9H6W3 641 aa16.52■□□□□ 0.24
HDAC6-213ENST00000462730 NYAP2Q9P242 653 aa16.52■□□□□ 0.24
HDAC6-213ENST00000462730 PCDHA6Q9UN73 950 aa16.52■□□□□ 0.24
HDAC6-213ENST00000462730 PCDHA8Q9Y5H6 950 aa16.52■□□□□ 0.24
HDAC6-213ENST00000462730 CCDC194A0A1B0GVG4 234 aa16.51■□□□□ 0.23
HDAC6-213ENST00000462730 M0R2N6 131 aa16.51■□□□□ 0.23
HDAC6-213ENST00000462730 TNNI2P48788 182 aa16.51■□□□□ 0.23
HDAC6-213ENST00000462730 ZNF543Q08ER8 600 aa16.51■□□□□ 0.23
HDAC6-213ENST00000462730 ZRSR1Q15695 479 aaKnown RBP16.51■□□□□ 0.23
HDAC6-213ENST00000462730 KIF4BQ2VIQ3 1234 aa16.51■□□□□ 0.23
HDAC6-213ENST00000462730 PGAP2Q9UHJ9 254 aa16.51■□□□□ 0.23
HDAC6-213ENST00000462730 AP5Z1O43299 807 aa16.51■□□□□ 0.23
HDAC6-213ENST00000462730 ATP2C1P98194 919 aaPredicted RBP16.51■□□□□ 0.23
HDAC6-213ENST00000462730 TNFAIP1Q13829 316 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms