RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.71□□□□□ -0.86
UBE4B-204ENST00000462658 PNISRQ8TF01 805 aaKnown RBP9.71□□□□□ -0.86
UBE4B-204ENST00000462658 TGIF2Q9GZN2 237 aa9.71□□□□□ -0.86
UBE4B-204ENST00000462658 POLR3KQ9Y2Y1 108 aaPredicted RBP9.71□□□□□ -0.86
UBE4B-204ENST00000462658 ACEP12821 1306 aa9.71□□□□□ -0.86
UBE4B-204ENST00000462658 MST1RQ04912 1400 aa9.71□□□□□ -0.86
UBE4B-204ENST00000462658 ANKARQ7Z5J8 1434 aa9.71□□□□□ -0.86
UBE4B-204ENST00000462658 ADGRL3Q9HAR2 1447 aa9.71□□□□□ -0.86
UBE4B-204ENST00000462658 NCOA3Q9Y6Q9 1424 aa9.71□□□□□ -0.86
UBE4B-204ENST00000462658 FANCGO15287 622 aa9.7□□□□□ -0.86
UBE4B-204ENST00000462658 DYRK3O43781 588 aa9.7□□□□□ -0.86
UBE4B-204ENST00000462658 TNNI2P48788 182 aa9.7□□□□□ -0.86
UBE4B-204ENST00000462658 ETF1P62495 437 aaKnown RBP9.7□□□□□ -0.86
UBE4B-204ENST00000462658 APOBRQ0VD83 1088 aa9.7□□□□□ -0.86
UBE4B-204ENST00000462658 PAK2Q13177 524 aa9.7□□□□□ -0.86
UBE4B-204ENST00000462658 SEZ6Q53EL9 994 aa9.7□□□□□ -0.86
UBE4B-204ENST00000462658 REC114Q7Z4M0 266 aa9.7□□□□□ -0.86
UBE4B-204ENST00000462658 PMFBP1Q8TBY8 1022 aa9.7□□□□□ -0.86
UBE4B-204ENST00000462658 NT5C1AQ9BXI3 368 aa9.7□□□□□ -0.86
UBE4B-204ENST00000462658 WNT10AQ9GZT5 417 aa9.7□□□□□ -0.86
UBE4B-204ENST00000462658 FBRSQ9HAH7 460 aa9.7□□□□□ -0.86
UBE4B-204ENST00000462658 EDC4Q6P2E9 1401 aaKnown RBP9.7□□□□□ -0.86
UBE4B-204ENST00000462658 USP32Q8NFA0 1604 aa9.7□□□□□ -0.86
UBE4B-204ENST00000462658 PHLPP1O60346 1717 aa9.69□□□□□ -0.86
UBE4B-204ENST00000462658 TNNT2P45379 298 aaPredicted RBP9.69□□□□□ -0.86
UBE4B-204ENST00000462658 MAP7Q14244 749 aa9.69□□□□□ -0.86
UBE4B-204ENST00000462658 NHSL1Q5SYE7 1610 aa9.69□□□□□ -0.86
UBE4B-204ENST00000462658 CDC42BPGQ6DT37 1551 aa9.69□□□□□ -0.86
UBE4B-204ENST00000462658 PAOXQ6QHF9 649 aa9.69□□□□□ -0.86
UBE4B-204ENST00000462658 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.69□□□□□ -0.86
UBE4B-204ENST00000462658 SHISA5Q8N114 240 aa9.69□□□□□ -0.86
UBE4B-204ENST00000462658 NGDNQ8NEJ9 315 aaKnown RBP9.69□□□□□ -0.86
UBE4B-204ENST00000462658 C19orf44Q9H6X5 657 aa9.69□□□□□ -0.86
UBE4B-204ENST00000462658 CCSER2Q9H7U1 834 aa9.69□□□□□ -0.86
UBE4B-204ENST00000462658 BRMS1Q9HCU9 246 aa9.69□□□□□ -0.86
UBE4B-204ENST00000462658 PCOLCE2Q9UKZ9 415 aa9.69□□□□□ -0.86
UBE4B-204ENST00000462658 AHDC1Q5TGY3 1603 aaPredicted RBP9.68□□□□□ -0.86
UBE4B-204ENST00000462658 MSH6P52701 1360 aa9.68□□□□□ -0.86
UBE4B-204ENST00000462658 NKD1Q969G9 470 aa9.68□□□□□ -0.86
UBE4B-204ENST00000462658 LRRC3Q9BY71 257 aa9.68□□□□□ -0.86
UBE4B-204ENST00000462658 SEMA6BQ9H3T3 888 aa9.68□□□□□ -0.86
UBE4B-204ENST00000462658 POLR3AO14802 1390 aaPredicted RBP9.67□□□□□ -0.86
UBE4B-204ENST00000462658 TTC21BQ7Z4L5 1316 aa9.67□□□□□ -0.86
UBE4B-204ENST00000462658 PGRP06401 933 aa9.67□□□□□ -0.86
UBE4B-204ENST00000462658 NKG7Q16617 165 aa9.67□□□□□ -0.86
UBE4B-204ENST00000462658 CWF19L2Q2TBE0 894 aaKnown RBP9.67□□□□□ -0.86
UBE4B-204ENST00000462658 SEZ6L2Q6UXD5 910 aa9.67□□□□□ -0.86
UBE4B-204ENST00000462658 CDC37L1Q7L3B6 337 aa9.67□□□□□ -0.86
UBE4B-204ENST00000462658 NME9Q86XW9 330 aa9.67□□□□□ -0.86
UBE4B-204ENST00000462658 ZNF507Q8TCN5 953 aa9.67□□□□□ -0.86
UBE4B-204ENST00000462658 C1GALT1Q9NS00 363 aa9.67□□□□□ -0.86
UBE4B-204ENST00000462658 TOPAZ1Q8N9V7 1692 aa9.67□□□□□ -0.86
UBE4B-204ENST00000462658 USP6P35125 1406 aa9.66□□□□□ -0.86
UBE4B-204ENST00000462658 DCCP43146 1447 aa9.66□□□□□ -0.86
UBE4B-204ENST00000462658 RGPD8O14715 1765 aaPredicted RBP9.66□□□□□ -0.86
UBE4B-204ENST00000462658 FMN2Q9NZ56 1722 aa9.66□□□□□ -0.86
UBE4B-204ENST00000462658 ATF3P18847 181 aa9.66□□□□□ -0.86
UBE4B-204ENST00000462658 FSTP19883 344 aa9.66□□□□□ -0.86
UBE4B-204ENST00000462658 ADMP35318 185 aa9.66□□□□□ -0.86
UBE4B-204ENST00000462658 CDK5R2Q13319 367 aa9.66□□□□□ -0.86
UBE4B-204ENST00000462658 COG3Q96JB2 828 aa9.66□□□□□ -0.86
UBE4B-204ENST00000462658 MFSD14AQ96MC6 490 aa9.66□□□□□ -0.86
UBE4B-204ENST00000462658 PRKAG2Q9UGJ0 569 aa9.66□□□□□ -0.86
UBE4B-204ENST00000462658 LRP6O75581 1613 aa9.65□□□□□ -0.86
UBE4B-204ENST00000462658 PLCG1P19174 1290 aa9.65□□□□□ -0.86
UBE4B-204ENST00000462658 MCM4P33991 863 aa9.65□□□□□ -0.86
UBE4B-204ENST00000462658 MTHFSP49914 203 aa9.65□□□□□ -0.86
UBE4B-204ENST00000462658 RNF43Q68DV7 783 aa9.65□□□□□ -0.86
UBE4B-204ENST00000462658 BRINP3Q76B58 766 aa9.65□□□□□ -0.86
UBE4B-204ENST00000462658 SLITRK4Q8IW52 837 aa9.65□□□□□ -0.86
UBE4B-204ENST00000462658 FBXL6Q8N531 539 aa9.65□□□□□ -0.86
UBE4B-204ENST00000462658 DDX17Q92841 729 aaKnown RBP9.65□□□□□ -0.86
UBE4B-204ENST00000462658 RGS17Q9UGC6 210 aaPredicted RBP9.65□□□□□ -0.86
UBE4B-204ENST00000462658 INPP5FQ9Y2H2 1132 aa9.65□□□□□ -0.86
UBE4B-204ENST00000462658 TACC3Q9Y6A5 838 aa9.65□□□□□ -0.86
UBE4B-204ENST00000462658 C1orf167Q5SNV9 1468 aa9.65□□□□□ -0.87
UBE4B-204ENST00000462658 TTC21AQ8NDW8 1320 aa9.64□□□□□ -0.87
UBE4B-204ENST00000462658 CLCQ05315 142 aa9.64□□□□□ -0.87
UBE4B-204ENST00000462658 PDE4BQ07343 736 aa9.64□□□□□ -0.87
UBE4B-204ENST00000462658 NFIAQ12857 509 aa9.64□□□□□ -0.87
UBE4B-204ENST00000462658 SLBPQ14493 270 aaKnown RBP eCLIP9.64□□□□□ -0.87
UBE4B-204ENST00000462658 WDR43Q15061 677 aaKnown RBP eCLIP9.64□□□□□ -0.87
UBE4B-204ENST00000462658 GK5Q6ZS86 529 aa9.64□□□□□ -0.87
UBE4B-204ENST00000462658 ACSF2Q96CM8 615 aaPredicted RBP9.64□□□□□ -0.87
UBE4B-204ENST00000462658 GPRASP2Q96D09 838 aa9.64□□□□□ -0.87
UBE4B-204ENST00000462658 CFAP53Q96M91 514 aa9.64□□□□□ -0.87
UBE4B-204ENST00000462658 TBC1D32Q96NH3 1257 aa9.64□□□□□ -0.87
UBE4B-204ENST00000462658 ORAI2Q96SN7 254 aa9.64□□□□□ -0.87
UBE4B-204ENST00000462658 CAPN10Q9HC96 672 aa9.64□□□□□ -0.87
UBE4B-204ENST00000462658 TJP2Q9UDY2 1190 aa9.64□□□□□ -0.87
UBE4B-204ENST00000462658 PCDHB14Q9Y5E9 798 aa9.64□□□□□ -0.87
UBE4B-204ENST00000462658 ITSN1Q15811 1721 aa9.64□□□□□ -0.87
UBE4B-204ENST00000462658 SSH2Q76I76 1423 aa9.64□□□□□ -0.87
UBE4B-204ENST00000462658 AKAP12Q02952 1782 aa9.63□□□□□ -0.87
UBE4B-204ENST00000462658 MON2Q7Z3U7 1717 aa9.63□□□□□ -0.87
UBE4B-204ENST00000462658 HTR3BO95264 441 aa9.63□□□□□ -0.87
UBE4B-204ENST00000462658 PRSS36Q5K4E3 855 aa9.63□□□□□ -0.87
UBE4B-204ENST00000462658 HID1Q8IV36 788 aa9.63□□□□□ -0.87
UBE4B-204ENST00000462658 GATA6Q92908 595 aa9.63□□□□□ -0.87
UBE4B-204ENST00000462658 DPH2Q9BQC3 489 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms