RNA–Protein interactions for RNA: ENST00000462260.1

PCOLCE-203, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-203ENST00000462260 TEX13BQ9BXU2 312 aa16.25■□□□□ 0.19
PCOLCE-203ENST00000462260 SLC38A10Q9HBR0 1119 aa16.25■□□□□ 0.19
PCOLCE-203ENST00000462260 DDX20Q9UHI6 824 aaKnown RBP16.25■□□□□ 0.19
PCOLCE-203ENST00000462260 NR2E3Q9Y5X4 410 aa16.25■□□□□ 0.19
PCOLCE-203ENST00000462260 RANBP6O60518 1105 aaKnown RBP16.24■□□□□ 0.19
PCOLCE-203ENST00000462260 NMT2O60551 498 aa16.24■□□□□ 0.19
PCOLCE-203ENST00000462260 MSCO60682 206 aa16.24■□□□□ 0.19
PCOLCE-203ENST00000462260 COL6A1P12109 1028 aa16.24■□□□□ 0.19
PCOLCE-203ENST00000462260 MFAP1P55081 439 aaKnown RBP16.24■□□□□ 0.19
PCOLCE-203ENST00000462260 SNRNP48Q6IEG0 339 aaKnown RBP16.24■□□□□ 0.19
PCOLCE-203ENST00000462260 KIFC2Q96AC6 838 aa16.24■□□□□ 0.19
PCOLCE-203ENST00000462260 C11orf49Q9H6J7 331 aa16.24■□□□□ 0.19
PCOLCE-203ENST00000462260 STX8Q9UNK0 236 aa16.24■□□□□ 0.19
PCOLCE-203ENST00000462260 DIS3Q9Y2L1 958 aaKnown RBP16.24■□□□□ 0.19
PCOLCE-203ENST00000462260 RIPK3Q9Y572 518 aa16.24■□□□□ 0.19
PCOLCE-203ENST00000462260 PFASO15067 1338 aa16.23■□□□□ 0.19
PCOLCE-203ENST00000462260 EVI5O60447 810 aa16.23■□□□□ 0.19
PCOLCE-203ENST00000462260 ZBED4O75132 1171 aa16.23■□□□□ 0.19
PCOLCE-203ENST00000462260 PDE4AP27815 886 aa16.23■□□□□ 0.19
PCOLCE-203ENST00000462260 CNGA1P29973 690 aa16.23■□□□□ 0.19
PCOLCE-203ENST00000462260 IRX6P78412 446 aaPredicted RBP16.23■□□□□ 0.19
PCOLCE-203ENST00000462260 KCTD2Q14681 263 aa16.23■□□□□ 0.19
PCOLCE-203ENST00000462260 ZNF792Q3KQV3 632 aa16.23■□□□□ 0.19
PCOLCE-203ENST00000462260 CWC27Q6UX04 472 aaKnown RBP16.23■□□□□ 0.19
PCOLCE-203ENST00000462260 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.23■□□□□ 0.19
PCOLCE-203ENST00000462260 COLQQ9Y215 455 aaPredicted RBP16.23■□□□□ 0.19
PCOLCE-203ENST00000462260 PLXNA1Q9UIW2 1896 aa16.22■□□□□ 0.19
PCOLCE-203ENST00000462260 TMEM232C9JQI7 657 aa16.22■□□□□ 0.19
PCOLCE-203ENST00000462260 HIP1O00291 1037 aa16.22■□□□□ 0.19
PCOLCE-203ENST00000462260 PLA2G6O60733 806 aa16.22■□□□□ 0.19
PCOLCE-203ENST00000462260 PGK2P07205 417 aa16.22■□□□□ 0.19
PCOLCE-203ENST00000462260 FDX1P10109 184 aa16.22■□□□□ 0.19
PCOLCE-203ENST00000462260 MCCP23508 829 aa16.22■□□□□ 0.19
PCOLCE-203ENST00000462260 SLC1A4P43007 532 aa16.22■□□□□ 0.19
PCOLCE-203ENST00000462260 OAZ1P54368 228 aa16.22■□□□□ 0.19
PCOLCE-203ENST00000462260 HAND2P61296 217 aa16.22■□□□□ 0.19
PCOLCE-203ENST00000462260 CPXCR1Q8N123 301 aa16.22■□□□□ 0.19
PCOLCE-203ENST00000462260 RAVER2Q9HCJ3 691 aaKnown RBP16.22■□□□□ 0.19
PCOLCE-203ENST00000462260 DIAPH3Q9NSV4 1193 aa16.22■□□□□ 0.19
PCOLCE-203ENST00000462260 TCP11L1Q9NUJ3 509 aa16.22■□□□□ 0.19
PCOLCE-203ENST00000462260 RANBP2P49792 3224 aaKnown RBP16.21■□□□□ 0.19
PCOLCE-203ENST00000462260 SEPT4O43236 478 aa16.21■□□□□ 0.19
PCOLCE-203ENST00000462260 PCP11498 1178 aaKnown RBP16.21■□□□□ 0.19
PCOLCE-203ENST00000462260 STAT2P52630 851 aa16.21■□□□□ 0.19
PCOLCE-203ENST00000462260 RRP12Q5JTH9 1297 aaKnown RBP16.21■□□□□ 0.19
PCOLCE-203ENST00000462260 AKNAD1Q5T1N1 836 aa16.21■□□□□ 0.19
PCOLCE-203ENST00000462260 FAM160B2Q86V87 743 aa16.21■□□□□ 0.19
PCOLCE-203ENST00000462260 CHURC1Q8WUH1 139 aa16.21■□□□□ 0.19
PCOLCE-203ENST00000462260 STAG1Q8WVM7 1258 aa16.21■□□□□ 0.19
PCOLCE-203ENST00000462260 TOMM22Q9NS69 142 aa16.21■□□□□ 0.19
PCOLCE-203ENST00000462260 NRBP1Q9UHY1 535 aa16.21■□□□□ 0.19
PCOLCE-203ENST00000462260 CTDP1Q9Y5B0 961 aaPredicted RBP16.21■□□□□ 0.19
PCOLCE-203ENST00000462260 DNAJC25-GNG10A0A024R161 153 aa16.2■□□□□ 0.18
PCOLCE-203ENST00000462260 PRAMEF19Q5SWL8 479 aa16.2■□□□□ 0.18
PCOLCE-203ENST00000462260 RCSD1Q6JBY9 416 aa16.2■□□□□ 0.18
PCOLCE-203ENST00000462260 CHRDL2Q6WN34 429 aa16.2■□□□□ 0.18
PCOLCE-203ENST00000462260 MFSD6Q6ZSS7 791 aa16.2■□□□□ 0.18
PCOLCE-203ENST00000462260 KCTD1Q719H9 257 aa16.2■□□□□ 0.18
PCOLCE-203ENST00000462260 TBC1D10CQ8IV04 446 aa16.2■□□□□ 0.18
PCOLCE-203ENST00000462260 TINF2Q9BSI4 451 aa16.2■□□□□ 0.18
PCOLCE-203ENST00000462260 PRO3102Q9H379 93 aa16.2■□□□□ 0.18
PCOLCE-203ENST00000462260 ZNF536O15090 1300 aa16.19■□□□□ 0.18
PCOLCE-203ENST00000462260 SMCHD1A6NHR9 2005 aa16.19■□□□□ 0.18
PCOLCE-203ENST00000462260 GSPT1P15170 499 aaKnown RBP16.19■□□□□ 0.18
PCOLCE-203ENST00000462260 TTC22Q5TAA0 569 aa16.19■□□□□ 0.18
PCOLCE-203ENST00000462260 RASGRP2Q7LDG7 609 aa16.19■□□□□ 0.18
PCOLCE-203ENST00000462260 CHST13Q8NET6 341 aa16.19■□□□□ 0.18
PCOLCE-203ENST00000462260 CHMP4CQ96CF2 233 aa16.19■□□□□ 0.18
PCOLCE-203ENST00000462260 DSCC1Q9BVC3 393 aa16.19■□□□□ 0.18
PCOLCE-203ENST00000462260 RNF41Q9H4P4 317 aaPredicted RBP16.19■□□□□ 0.18
PCOLCE-203ENST00000462260 FBXO40Q9UH90 709 aa16.19■□□□□ 0.18
PCOLCE-203ENST00000462260 TRIOBPQ9H2D6 2365 aa16.19■□□□□ 0.18
PCOLCE-203ENST00000462260 LAMA4Q16363 1823 aa16.18■□□□□ 0.18
PCOLCE-203ENST00000462260 DNM1LO00429 736 aa16.18■□□□□ 0.18
PCOLCE-203ENST00000462260 TOP1P11387 765 aaKnown RBP16.18■□□□□ 0.18
PCOLCE-203ENST00000462260 SLC4A3P48751 1232 aa16.18■□□□□ 0.18
PCOLCE-203ENST00000462260 IKQ13123 557 aaPredicted RBP16.18■□□□□ 0.18
PCOLCE-203ENST00000462260 ANO1Q5XXA6 986 aa16.18■□□□□ 0.18
PCOLCE-203ENST00000462260 C7orf61Q8IZ16 206 aa16.18■□□□□ 0.18
PCOLCE-203ENST00000462260 MSL3Q8N5Y2 521 aaKnown RBP16.18■□□□□ 0.18
PCOLCE-203ENST00000462260 DCAF4Q8WV16 495 aa16.18■□□□□ 0.18
PCOLCE-203ENST00000462260 DDX11Q96FC9 970 aa16.18■□□□□ 0.18
PCOLCE-203ENST00000462260 TTC14Q96N46 770 aa16.18■□□□□ 0.18
PCOLCE-203ENST00000462260 TMEM47Q9BQJ4 181 aa16.18■□□□□ 0.18
PCOLCE-203ENST00000462260 RBM27Q9P2N5 1060 aaKnown RBP16.18■□□□□ 0.18
PCOLCE-203ENST00000462260 ISY1Q9ULR0 285 aaKnown RBP16.18■□□□□ 0.18
PCOLCE-203ENST00000462260 NEDD4P46934 1319 aa16.18■□□□□ 0.18
PCOLCE-203ENST00000462260 DNAH12Q6ZR08 3092 aa16.17■□□□□ 0.18
PCOLCE-203ENST00000462260 ZNF213O14771 459 aa16.17■□□□□ 0.18
PCOLCE-203ENST00000462260 NT5C2P49902 561 aa16.17■□□□□ 0.18
PCOLCE-203ENST00000462260 LRRC26Q2I0M4 334 aa16.17■□□□□ 0.18
PCOLCE-203ENST00000462260 MAMDC4Q6UXC1 1216 aa16.17■□□□□ 0.18
PCOLCE-203ENST00000462260 BTNL9Q6UXG8 535 aa16.17■□□□□ 0.18
PCOLCE-203ENST00000462260 ZNF467Q7Z7K2 595 aaPredicted RBP16.17■□□□□ 0.18
PCOLCE-203ENST00000462260 ARRDC4Q8NCT1 418 aa16.17■□□□□ 0.18
PCOLCE-203ENST00000462260 IL25Q9H293 177 aa16.17■□□□□ 0.18
PCOLCE-203ENST00000462260 PRR12Q9ULL5 1215 aa16.17■□□□□ 0.18
PCOLCE-203ENST00000462260 SYNGAP1Q96PV0 1343 aa16.17■□□□□ 0.18
PCOLCE-203ENST00000462260 SNAI1O95863 264 aaPredicted RBP16.16■□□□□ 0.18
PCOLCE-203ENST00000462260 ZNF865P0CJ78 1059 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms