RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 USP17L17D6RBQ6 530 aa8.73□□□□□ -1.01
TRAPPC10-205ENST00000461889 USP17L19D6RCP7 530 aa8.73□□□□□ -1.01
TRAPPC10-205ENST00000461889 USP17L20D6RJB6 530 aa8.73□□□□□ -1.01
TRAPPC10-205ENST00000461889 ZZEF1O43149 2961 aa8.73□□□□□ -1.01
TRAPPC10-205ENST00000461889 ASGR1P07306 291 aa8.73□□□□□ -1.01
TRAPPC10-205ENST00000461889 ASNSP08243 561 aa8.73□□□□□ -1.01
TRAPPC10-205ENST00000461889 LTBRP36941 435 aa8.73□□□□□ -1.01
TRAPPC10-205ENST00000461889 USP17L24Q0WX57 530 aa8.73□□□□□ -1.01
TRAPPC10-205ENST00000461889 RSPO4Q2I0M5 234 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC10-205ENST00000461889 CWF19L2Q2TBE0 894 aaKnown RBP8.73□□□□□ -1.01
TRAPPC10-205ENST00000461889 TIGD5Q53EQ6 642 aa8.73□□□□□ -1.01
TRAPPC10-205ENST00000461889 RIPOR3Q96MK2 946 aa8.73□□□□□ -1.01
TRAPPC10-205ENST00000461889 PNNQ9H307 717 aaKnown RBP8.73□□□□□ -1.01
TRAPPC10-205ENST00000461889 DDX4Q9NQI0 724 aaKnown RBP8.73□□□□□ -1.01
TRAPPC10-205ENST00000461889 EMILIN3Q9NT22 766 aa8.73□□□□□ -1.01
TRAPPC10-205ENST00000461889 LCHNA4D1U4 455 aa8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 FAM196BA6NMK8 535 aa8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 LMNAP02545 664 aaKnown RBP8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 HSPA5P11021 654 aaKnown RBP8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 EMP3P54852 163 aa8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 RIPK4P57078 832 aa8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 FOXO4P98177 505 aa8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 LMOD3Q0VAK6 560 aa8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 SMAD4Q13485 552 aaKnown RBP8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 PTPROQ16827 1216 aa8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 CTC1Q2NKJ3 1217 aa8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 USP17L2Q6R6M4 530 aa8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 CATSPERGQ6ZRH7 1159 aa8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 VTI1AQ96AJ9 217 aa8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 C12orf42Q96LP6 360 aa8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 HS3ST6Q96QI5 342 aa8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 GINM1Q9NU53 330 aa8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 SIP14410 1827 aa8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 CLSPNQ9HAW4 1339 aa8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 SPEGQ15772 3267 aa8.72□□□□□ -1.01
TRAPPC10-205ENST00000461889 COL11A1P12107 1806 aaPredicted RBP8.71□□□□□ -1.01
TRAPPC10-205ENST00000461889 PI4KAP2A4QPH2 592 aa8.71□□□□□ -1.02
TRAPPC10-205ENST00000461889 MYADML2A6NDP7 307 aa8.71□□□□□ -1.02
TRAPPC10-205ENST00000461889 DUSP11O75319 330 aaKnown RBP8.71□□□□□ -1.02
TRAPPC10-205ENST00000461889 TAL1P17542 331 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC10-205ENST00000461889 PI4KAP1Q8N8J0 262 aa8.71□□□□□ -1.02
TRAPPC10-205ENST00000461889 TMEM105Q8N8V8 129 aa8.71□□□□□ -1.02
TRAPPC10-205ENST00000461889 BANK1Q8NDB2 785 aa8.71□□□□□ -1.02
TRAPPC10-205ENST00000461889 LENG1Q96BZ8 264 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC10-205ENST00000461889 SCLYQ96I15 445 aa8.71□□□□□ -1.02
TRAPPC10-205ENST00000461889 ZNF594Q96JF6 807 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC10-205ENST00000461889 TINF2Q9BSI4 451 aa8.71□□□□□ -1.02
TRAPPC10-205ENST00000461889 MOV10L1Q9BXT6 1211 aaKnown RBP8.71□□□□□ -1.02
TRAPPC10-205ENST00000461889 HERC5Q9UII4 1024 aaKnown RBP8.71□□□□□ -1.02
TRAPPC10-205ENST00000461889 DIS3Q9Y2L1 958 aaKnown RBP8.71□□□□□ -1.02
TRAPPC10-205ENST00000461889 KIF16BQ96L93 1317 aa8.71□□□□□ -1.02
TRAPPC10-205ENST00000461889 MAPK8IP3Q9UPT6 1336 aa8.71□□□□□ -1.02
TRAPPC10-205ENST00000461889 BPTFQ12830 3046 aa8.71□□□□□ -1.02
TRAPPC10-205ENST00000461889 BAIAP3O94812 1187 aa8.7□□□□□ -1.02
TRAPPC10-205ENST00000461889 PRDX5P30044 214 aa8.7□□□□□ -1.02
TRAPPC10-205ENST00000461889 RFC2P35250 354 aa8.7□□□□□ -1.02
TRAPPC10-205ENST00000461889 ATXN1P54253 815 aaKnown RBP8.7□□□□□ -1.02
TRAPPC10-205ENST00000461889 NKX3-2P78367 333 aa8.7□□□□□ -1.02
TRAPPC10-205ENST00000461889 CCDC57Q2TAC2 916 aa8.7□□□□□ -1.02
TRAPPC10-205ENST00000461889 TCEAL5Q5H9L2 206 aa8.7□□□□□ -1.02
TRAPPC10-205ENST00000461889 UPF3AQ9H1J1 476 aaKnown RBP8.7□□□□□ -1.02
TRAPPC10-205ENST00000461889 MROH8Q9H579 483 aa8.7□□□□□ -1.02
TRAPPC10-205ENST00000461889 CLDND1Q9NY35 253 aa8.7□□□□□ -1.02
TRAPPC10-205ENST00000461889 FAM184BQ9ULE4 1060 aa8.7□□□□□ -1.02
TRAPPC10-205ENST00000461889 TRIM35Q9UPQ4 493 aa8.7□□□□□ -1.02
TRAPPC10-205ENST00000461889 HELZ2Q9BYK8 2649 aaKnown RBP8.7□□□□□ -1.02
TRAPPC10-205ENST00000461889 MROH5Q6ZUA9 1318 aa8.7□□□□□ -1.02
TRAPPC10-205ENST00000461889 LINC01553A4QN01 128 aa8.69□□□□□ -1.02
TRAPPC10-205ENST00000461889 SPDYE16A6NNV3 312 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC10-205ENST00000461889 PDGFBP01127 241 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC10-205ENST00000461889 ERCC3P19447 782 aa8.69□□□□□ -1.02
TRAPPC10-205ENST00000461889 ICAM3P32942 547 aa8.69□□□□□ -1.02
TRAPPC10-205ENST00000461889 GJA9P57773 515 aa8.69□□□□□ -1.02
TRAPPC10-205ENST00000461889 DMWDQ09019 674 aa8.69□□□□□ -1.02
TRAPPC10-205ENST00000461889 TAF7LQ5H9L4 462 aa8.69□□□□□ -1.02
TRAPPC10-205ENST00000461889 EP400NLQ6ZTU2 488 aa8.69□□□□□ -1.02
TRAPPC10-205ENST00000461889 RNF166Q96A37 237 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC10-205ENST00000461889 RAD9AQ99638 391 aa8.69□□□□□ -1.02
TRAPPC10-205ENST00000461889 NSUN3Q9H649 340 aaKnown RBP8.69□□□□□ -1.02
TRAPPC10-205ENST00000461889 MTUS1Q9ULD2 1270 aa8.69□□□□□ -1.02
TRAPPC10-205ENST00000461889 PCDHGC5Q9Y5F6 944 aa8.69□□□□□ -1.02
TRAPPC10-205ENST00000461889 CDK5RAP2Q96SN8 1893 aa8.68□□□□□ -1.02
TRAPPC10-205ENST00000461889 PTPRSQ13332 1948 aa8.68□□□□□ -1.02
TRAPPC10-205ENST00000461889 MAP3K13O43283 966 aa8.68□□□□□ -1.02
TRAPPC10-205ENST00000461889 CABYRO75952 493 aa8.68□□□□□ -1.02
TRAPPC10-205ENST00000461889 EYA4O95677 639 aa8.68□□□□□ -1.02
TRAPPC10-205ENST00000461889 LDHBP07195 334 aaKnown RBP8.68□□□□□ -1.02
TRAPPC10-205ENST00000461889 C6orf222P0C671 652 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC10-205ENST00000461889 PPP2R1AP30153 589 aa8.68□□□□□ -1.02
TRAPPC10-205ENST00000461889 JAG1P78504 1218 aa8.68□□□□□ -1.02
TRAPPC10-205ENST00000461889 PICALMQ13492 652 aa8.68□□□□□ -1.02
TRAPPC10-205ENST00000461889 DEFB128Q7Z7B8 93 aa8.68□□□□□ -1.02
TRAPPC10-205ENST00000461889 RPAINQ86UA6 219 aa8.68□□□□□ -1.02
TRAPPC10-205ENST00000461889 MSL3Q8N5Y2 521 aaKnown RBP8.68□□□□□ -1.02
TRAPPC10-205ENST00000461889 FBXO22Q8NEZ5 403 aa8.68□□□□□ -1.02
TRAPPC10-205ENST00000461889 KCNG4Q8TDN1 519 aa8.68□□□□□ -1.02
TRAPPC10-205ENST00000461889 RUBCNQ92622 972 aa8.68□□□□□ -1.02
TRAPPC10-205ENST00000461889 SPATC1LQ9H0A9 340 aa8.68□□□□□ -1.02
TRAPPC10-205ENST00000461889 MYH16Q9H6N6 1097 aa8.68□□□□□ -1.02
TRAPPC10-205ENST00000461889 SPC25Q9HBM1 224 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms