RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 COL4A1P02462 1669 aa4.69□□□□□ -1.66
ATP13A3-206ENST00000461660 PNMA6FA0A0J9YX94 578 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 PALM3A6NDB9 673 aaPredicted RBP4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 WNT10BO00744 389 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 PPP1R12BO60237 982 aaPredicted RBP4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 PPP6R2O75170 966 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 NDUFB10O96000 172 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 KCNA3P22001 575 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 CMA1P23946 247 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 U2AF2P26368 475 aaKnown RBP eCLIP4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 TYRO3Q06418 890 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 GABPAQ06546 454 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 INF2Q27J81 1249 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 USH1GQ495M9 461 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 WWC2Q6AWC2 1192 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 RASGRP4Q8TDF6 673 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 OXER1Q8TDS5 423 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 ZNF341Q9BYN7 854 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 PSTPIP2Q9H939 334 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 BARHL2Q9NY43 387 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 TMOD4Q9NZQ9 345 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 KCNH3Q9ULD8 1083 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 CSADQ9Y600 493 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 UBE2Q2LH0YL09 131 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 BIN1O00499 593 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 NR1I2O75469 434 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 PFKFB1P16118 471 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 SMARCA1P28370 1054 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 ZNF165P49910 485 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 STAT2P52630 851 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 CDC37Q16543 378 aaPredicted RBP4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 EAPPQ56P03 285 aaPredicted RBP4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 ANGEL2Q5VTE6 544 aaKnown RBP4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 MCTP2Q6DN12 878 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 NEK8Q86SG6 692 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 NKX2-3Q8TAU0 364 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 COA7Q96BR5 231 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 DHX58Q96C10 678 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 CALML4Q96GE6 196 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 DEFB129Q9H1M3 183 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 GGA3Q9NZ52 723 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 BIN2Q9UBW5 565 aaPredicted RBP4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 MAD2L2Q9UI95 211 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 TUBGCP6Q96RT7 1819 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 LTBP3Q9NS15 1303 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 USP17L10C9JJH3 530 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 ZBTB5O15062 677 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 NEMFO60524 1076 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 CCNT1O60563 726 aaKnown RBP4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 ZNF202O95125 648 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 SSBP05455 408 aaKnown RBP eCLIP4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 CCDC173Q0VFZ6 552 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 PPP1R18Q6NYC8 613 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 CCDC174Q6PII3 467 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 FAM160B2Q86V87 743 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 IQUBQ8NA54 791 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 SMARCE1Q969G3 411 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 PGBD1Q96JS3 809 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 CCDC43Q96MW1 224 aaKnown RBP4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 WRNIP1Q96S55 665 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 NUP88Q99567 741 aaPredicted RBP4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 PHF20Q9BVI0 1012 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 HACL1Q9UJ83 578 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 MYH7P12883 1935 aa4.68□□□□□ -1.66
ATP13A3-206ENST00000461660 ZBED4O75132 1171 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 TPM3P06753 285 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 MSNP26038 577 aaKnown RBP4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 STAT6P42226 847 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 USP14P54578 494 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 PTGDRQ13258 359 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 SPECC1Q5M775 1068 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 C9orf131Q5VYM1 1079 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 TTBK2Q6IQ55 1244 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 NBPF11Q86T75 865 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 FCHSD1Q86WN1 690 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 CPXCR1Q8N123 301 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 GPC2Q8N158 579 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 ANKRD20A12PQ8NF67 263 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 FAM200AQ8TCP9 573 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 CLIC6Q96NY7 704 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 GMLQ99445 158 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 TRIM5Q9C035 493 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 TNS1Q9HBL0 1735 aaKnown RBP4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 BMP2KQ9NSY1 1161 aaPredicted RBP4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 PNMA2Q9UL42 364 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 MRPL11Q9Y3B7 192 aaKnown RBP4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 PCDHB6Q9Y5E3 794 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 NID2Q14112 1375 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 POLR2DO15514 142 aaKnown RBP4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 GRIN3BO60391 1043 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 FLOT1O75955 427 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 KRT18P05783 430 aaKnown RBP4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 CDK11BP21127 795 aaKnown RBP4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 NDUFA8P51970 172 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 STIM1Q13586 685 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 QRICH1Q2TAL8 776 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 ANO6Q4KMQ2 910 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 FAM83BQ5T0W9 1011 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 RRAGBQ5VZM2 374 aa4.67□□□□□ -1.66
ATP13A3-206ENST00000461660 ADGRF4Q8IZF3 695 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms