RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 THEGQ9P2T0 379 aa16.59■□□□□ 0.25
PABPC4-208ENST00000461578 ZNF214Q9UL59 606 aaPredicted RBP16.59■□□□□ 0.25
PABPC4-208ENST00000461578 FAM184BQ9ULE4 1060 aa16.59■□□□□ 0.25
PABPC4-208ENST00000461578 PPP1R9AQ9ULJ8 1098 aa16.59■□□□□ 0.25
PABPC4-208ENST00000461578 MYO9BQ13459 2157 aa16.58■□□□□ 0.25
PABPC4-208ENST00000461578 MBD4O95243 580 aa16.58■□□□□ 0.24
PABPC4-208ENST00000461578 SNAI1O95863 264 aaPredicted RBP16.58■□□□□ 0.24
PABPC4-208ENST00000461578 C6orf222P0C671 652 aaPredicted RBP16.58■□□□□ 0.24
PABPC4-208ENST00000461578 CCSAPQ6IQ19 270 aaPredicted RBP16.58■□□□□ 0.24
PABPC4-208ENST00000461578 CEP85Q6P2H3 762 aa16.58■□□□□ 0.24
PABPC4-208ENST00000461578 ERC1Q8IUD2 1116 aa16.58■□□□□ 0.24
PABPC4-208ENST00000461578 REPS2Q8NFH8 660 aa16.58■□□□□ 0.24
PABPC4-208ENST00000461578 ATXN2LQ8WWM7 1075 aaKnown RBP16.58■□□□□ 0.24
PABPC4-208ENST00000461578 DDX11Q96FC9 970 aa16.58■□□□□ 0.24
PABPC4-208ENST00000461578 CCDC17Q96LX7 622 aa16.58■□□□□ 0.24
PABPC4-208ENST00000461578 GLT1D1Q96MS3 346 aa16.58■□□□□ 0.24
PABPC4-208ENST00000461578 ASB2Q96Q27 587 aa16.58■□□□□ 0.24
PABPC4-208ENST00000461578 GOPCQ9HD26 462 aa16.58■□□□□ 0.24
PABPC4-208ENST00000461578 MROH7Q68CQ1 1323 aa16.57■□□□□ 0.24
PABPC4-208ENST00000461578 ASGR1P07306 291 aa16.57■□□□□ 0.24
PABPC4-208ENST00000461578 RLBP1P12271 317 aa16.57■□□□□ 0.24
PABPC4-208ENST00000461578 COPB2P35606 906 aa16.57■□□□□ 0.24
PABPC4-208ENST00000461578 ADGRE1Q14246 886 aa16.57■□□□□ 0.24
PABPC4-208ENST00000461578 SNRNP48Q6IEG0 339 aaKnown RBP16.57■□□□□ 0.24
PABPC4-208ENST00000461578 CCDC174Q6PII3 467 aa16.57■□□□□ 0.24
PABPC4-208ENST00000461578 ZNF365Q70YC5 407 aa16.57■□□□□ 0.24
PABPC4-208ENST00000461578 TMEM199Q8N511 208 aa16.57■□□□□ 0.24
PABPC4-208ENST00000461578 NUP88Q99567 741 aaPredicted RBP16.57■□□□□ 0.24
PABPC4-208ENST00000461578 SYNGAP1Q96PV0 1343 aa16.56■□□□□ 0.24
PABPC4-208ENST00000461578 USP17L12C9JPN9 530 aa16.56■□□□□ 0.24
PABPC4-208ENST00000461578 USP17L21D6R901 530 aa16.56■□□□□ 0.24
PABPC4-208ENST00000461578 ADCY6O43306 1168 aa16.56■□□□□ 0.24
PABPC4-208ENST00000461578 DUSP11O75319 330 aaKnown RBP16.56■□□□□ 0.24
PABPC4-208ENST00000461578 AKNAD1Q5T1N1 836 aa16.56■□□□□ 0.24
PABPC4-208ENST00000461578 C12orf60Q5U649 245 aa16.56■□□□□ 0.24
PABPC4-208ENST00000461578 AMOTL1Q8IY63 956 aa16.56■□□□□ 0.24
PABPC4-208ENST00000461578 IL27Q8NEV9 243 aa16.56■□□□□ 0.24
PABPC4-208ENST00000461578 RHPN1Q8TCX5 695 aa16.56■□□□□ 0.24
PABPC4-208ENST00000461578 UHRF1Q96T88 793 aaPredicted RBP16.56■□□□□ 0.24
PABPC4-208ENST00000461578 NKX2-4Q9H2Z4 354 aa16.56■□□□□ 0.24
PABPC4-208ENST00000461578 KANSL2Q9H9L4 492 aa16.56■□□□□ 0.24
PABPC4-208ENST00000461578 ATP8A2Q9NTI2 1148 aa16.56■□□□□ 0.24
PABPC4-208ENST00000461578 RIPK3Q9Y572 518 aa16.56■□□□□ 0.24
PABPC4-208ENST00000461578 ELP1O95163 1332 aa16.55■□□□□ 0.24
PABPC4-208ENST00000461578 A0A0U1RQG5 324 aaPredicted RBP16.55■□□□□ 0.24
PABPC4-208ENST00000461578 CHGBP05060 677 aa16.55■□□□□ 0.24
PABPC4-208ENST00000461578 CDK7P50613 346 aa16.55■□□□□ 0.24
PABPC4-208ENST00000461578 MRPS5P82675 430 aaKnown RBP16.55■□□□□ 0.24
PABPC4-208ENST00000461578 RASIP1Q5U651 963 aa16.55■□□□□ 0.24
PABPC4-208ENST00000461578 PSRC1Q6PGN9 363 aaPredicted RBP16.55■□□□□ 0.24
PABPC4-208ENST00000461578 C16orf86Q6ZW13 317 aa16.55■□□□□ 0.24
PABPC4-208ENST00000461578 CPXCR1Q8N123 301 aa16.55■□□□□ 0.24
PABPC4-208ENST00000461578 MSL3Q8N5Y2 521 aaKnown RBP16.55■□□□□ 0.24
PABPC4-208ENST00000461578 PCSK9Q8NBP7 692 aaKnown RBP16.55■□□□□ 0.24
PABPC4-208ENST00000461578 SLF1Q9BQI6 1058 aa16.55■□□□□ 0.24
PABPC4-208ENST00000461578 TEX13BQ9BXU2 312 aa16.55■□□□□ 0.24
PABPC4-208ENST00000461578 MSRAQ9UJ68 235 aa16.55■□□□□ 0.24
PABPC4-208ENST00000461578 MCM3APO60318 1980 aa16.55■□□□□ 0.24
PABPC4-208ENST00000461578 GBF1Q92538 1859 aa16.54■□□□□ 0.24
PABPC4-208ENST00000461578 ARVCFO00192 962 aa16.54■□□□□ 0.24
PABPC4-208ENST00000461578 CST5P28325 142 aaPredicted RBP16.54■□□□□ 0.24
PABPC4-208ENST00000461578 CYP2C18P33260 490 aa16.54■□□□□ 0.24
PABPC4-208ENST00000461578 ACVR2BQ13705 512 aa16.54■□□□□ 0.24
PABPC4-208ENST00000461578 MAMDC4Q6UXC1 1216 aa16.54■□□□□ 0.24
PABPC4-208ENST00000461578 STK11IPQ8N1F8 1099 aa16.54■□□□□ 0.24
PABPC4-208ENST00000461578 SPC25Q9HBM1 224 aa16.54■□□□□ 0.24
PABPC4-208ENST00000461578 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.54■□□□□ 0.24
PABPC4-208ENST00000461578 CXXC1Q9P0U4 656 aaPredicted RBP16.54■□□□□ 0.24
PABPC4-208ENST00000461578 DNAJC25-GNG10A0A024R161 153 aa16.53■□□□□ 0.24
PABPC4-208ENST00000461578 TLR3O15455 904 aaKnown RBP16.53■□□□□ 0.24
PABPC4-208ENST00000461578 IFIT2P09913 472 aaKnown RBP16.53■□□□□ 0.24
PABPC4-208ENST00000461578 ADD2P35612 726 aa16.53■□□□□ 0.24
PABPC4-208ENST00000461578 RAB30Q15771 203 aa16.53■□□□□ 0.24
PABPC4-208ENST00000461578 CCDC144BQ3MJ40 725 aa16.53■□□□□ 0.24
PABPC4-208ENST00000461578 GNASQ5JWF2 1037 aa16.53■□□□□ 0.24
PABPC4-208ENST00000461578 FAM126BQ8IXS8 530 aa16.53■□□□□ 0.24
PABPC4-208ENST00000461578 CLASRPQ8N2M8 674 aaKnown RBP16.53■□□□□ 0.24
PABPC4-208ENST00000461578 MICALL1Q8N3F8 863 aa16.53■□□□□ 0.24
PABPC4-208ENST00000461578 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.53■□□□□ 0.24
PABPC4-208ENST00000461578 DDRGK1Q96HY6 314 aa16.53■□□□□ 0.24
PABPC4-208ENST00000461578 PAG1Q9NWQ8 432 aa16.53■□□□□ 0.24
PABPC4-208ENST00000461578 YBX2Q9Y2T7 364 aaKnown RBP16.53■□□□□ 0.24
PABPC4-208ENST00000461578 CTDP1Q9Y5B0 961 aaPredicted RBP16.53■□□□□ 0.24
PABPC4-208ENST00000461578 SLC4A4Q9Y6R1 1079 aa16.53■□□□□ 0.24
PABPC4-208ENST00000461578 GJA9P57773 515 aa16.52■□□□□ 0.24
PABPC4-208ENST00000461578 BEX3Q00994 111 aa16.52■□□□□ 0.24
PABPC4-208ENST00000461578 HSP90AB4PQ58FF6 505 aa16.52■□□□□ 0.24
PABPC4-208ENST00000461578 CTR9Q6PD62 1173 aa16.52■□□□□ 0.24
PABPC4-208ENST00000461578 NECAB3Q96P71 396 aaPredicted RBP16.52■□□□□ 0.24
PABPC4-208ENST00000461578 BOLA2Q9H3K6 86 aa16.52■□□□□ 0.24
PABPC4-208ENST00000461578 SLC28A3Q9HAS3 691 aa16.52■□□□□ 0.24
PABPC4-208ENST00000461578 RAVER2Q9HCJ3 691 aaKnown RBP16.52■□□□□ 0.24
PABPC4-208ENST00000461578 IL23AQ9NPF7 189 aa16.52■□□□□ 0.24
PABPC4-208ENST00000461578 TCF20Q9UGU0 1960 aaKnown RBP16.51■□□□□ 0.23
PABPC4-208ENST00000461578 UMODL1Q5DID0 1318 aa16.51■□□□□ 0.23
PABPC4-208ENST00000461578 CHD9Q3L8U1 2897 aa16.51■□□□□ 0.23
PABPC4-208ENST00000461578 FGBP02675 491 aa16.51■□□□□ 0.23
PABPC4-208ENST00000461578 PLA2G5P39877 138 aa16.51■□□□□ 0.23
PABPC4-208ENST00000461578 RABGGTBP53611 331 aa16.51■□□□□ 0.23
PABPC4-208ENST00000461578 ARMCX2Q7L311 632 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms