RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 RBM28Q9NW13 759 aaKnown RBP16.79■□□□□ 0.28
COL5A3-202ENST00000461214 LIMCH1Q9UPQ0 1083 aa16.79■□□□□ 0.28
COL5A3-202ENST00000461214 PARP1P09874 1014 aaKnown RBP16.78■□□□□ 0.28
COL5A3-202ENST00000461214 SLC1A4P43007 532 aa16.78■□□□□ 0.28
COL5A3-202ENST00000461214 METAP2P50579 478 aaKnown RBP eCLIP16.78■□□□□ 0.28
COL5A3-202ENST00000461214 ZNF543Q08ER8 600 aa16.78■□□□□ 0.28
COL5A3-202ENST00000461214 CHMP4CQ96CF2 233 aa16.78■□□□□ 0.28
COL5A3-202ENST00000461214 LRCH3Q96II8 777 aa16.78■□□□□ 0.28
COL5A3-202ENST00000461214 MS4A4AQ96JQ5 239 aa16.78■□□□□ 0.28
COL5A3-202ENST00000461214 ZCCHC17Q9NP64 241 aaKnown RBP16.78■□□□□ 0.28
COL5A3-202ENST00000461214 AGTPBP1Q9UPW5 1226 aa16.78■□□□□ 0.28
COL5A3-202ENST00000461214 SLC45A1Q9Y2W3 748 aa16.78■□□□□ 0.28
COL5A3-202ENST00000461214 SMCHD1A6NHR9 2005 aa16.77■□□□□ 0.28
COL5A3-202ENST00000461214 MYPNQ86TC9 1320 aa16.77■□□□□ 0.28
COL5A3-202ENST00000461214 ZNFX1Q9P2E3 1918 aaKnown RBP16.77■□□□□ 0.28
COL5A3-202ENST00000461214 CCDC196A0A1B0GTZ2 297 aa16.77■□□□□ 0.28
COL5A3-202ENST00000461214 TESPA1A2RU30 521 aaPredicted RBP16.77■□□□□ 0.28
COL5A3-202ENST00000461214 GOLGA8AA7E2F4 631 aa16.77■□□□□ 0.28
COL5A3-202ENST00000461214 BMP3P12645 472 aa16.77■□□□□ 0.28
COL5A3-202ENST00000461214 PDIA3P30101 505 aaKnown RBP16.77■□□□□ 0.28
COL5A3-202ENST00000461214 MNX1P50219 401 aaPredicted RBP16.77■□□□□ 0.28
COL5A3-202ENST00000461214 PABPC4Q13310 644 aaKnown RBP eCLIP16.77■□□□□ 0.28
COL5A3-202ENST00000461214 TAF1CQ15572 869 aaPredicted RBP16.77■□□□□ 0.28
COL5A3-202ENST00000461214 CCDC96Q2M329 555 aa16.77■□□□□ 0.28
COL5A3-202ENST00000461214 NUP133Q8WUM0 1156 aa16.77■□□□□ 0.28
COL5A3-202ENST00000461214 MYL10Q9BUA6 226 aa16.77■□□□□ 0.28
COL5A3-202ENST00000461214 TPCN1Q9ULQ1 816 aa16.77■□□□□ 0.28
COL5A3-202ENST00000461214 PLXNA1Q9UIW2 1896 aa16.77■□□□□ 0.27
COL5A3-202ENST00000461214 CCL15-CCL14A0A0B4J2E2 113 aa16.76■□□□□ 0.27
COL5A3-202ENST00000461214 PALM3A6NDB9 673 aaPredicted RBP16.76■□□□□ 0.27
COL5A3-202ENST00000461214 SOX1O00570 391 aaPredicted RBP16.76■□□□□ 0.27
COL5A3-202ENST00000461214 RAD21O60216 631 aa16.76■□□□□ 0.27
COL5A3-202ENST00000461214 PLA2G6O60733 806 aa16.76■□□□□ 0.27
COL5A3-202ENST00000461214 CD2BP2O95400 341 aaKnown RBP16.76■□□□□ 0.27
COL5A3-202ENST00000461214 GNAQP50148 359 aa16.76■□□□□ 0.27
COL5A3-202ENST00000461214 MOGSQ13724 837 aa16.76■□□□□ 0.27
COL5A3-202ENST00000461214 CCL15Q16663 113 aa16.76■□□□□ 0.27
COL5A3-202ENST00000461214 RTN1Q16799 776 aa16.76■□□□□ 0.27
COL5A3-202ENST00000461214 KIAA1755Q5JYT7 1200 aa16.76■□□□□ 0.27
COL5A3-202ENST00000461214 SPICE1Q8N0Z3 855 aa16.76■□□□□ 0.27
COL5A3-202ENST00000461214 FANCBQ8NB91 859 aa16.76■□□□□ 0.27
COL5A3-202ENST00000461214 SLKQ9H2G2 1235 aaPredicted RBP16.76■□□□□ 0.27
COL5A3-202ENST00000461214 NAP1L2Q9ULW6 460 aaPredicted RBP16.76■□□□□ 0.27
COL5A3-202ENST00000461214 ZNF236Q9UL36 1845 aa16.75■□□□□ 0.27
COL5A3-202ENST00000461214 DHX16O60231 1041 aaKnown RBP16.75■□□□□ 0.27
COL5A3-202ENST00000461214 PFKFB2O60825 505 aa16.75■□□□□ 0.27
COL5A3-202ENST00000461214 HOXA7P31268 230 aaPredicted RBP16.75■□□□□ 0.27
COL5A3-202ENST00000461214 STAT2P52630 851 aa16.75■□□□□ 0.27
COL5A3-202ENST00000461214 FAM83BQ5T0W9 1011 aa16.75■□□□□ 0.27
COL5A3-202ENST00000461214 GADL1Q6ZQY3 521 aa16.75■□□□□ 0.27
COL5A3-202ENST00000461214 NOL8Q76FK4 1167 aaKnown RBP16.75■□□□□ 0.27
COL5A3-202ENST00000461214 RASGRP2Q7LDG7 609 aa16.75■□□□□ 0.27
COL5A3-202ENST00000461214 ANKRD23Q86SG2 305 aa16.75■□□□□ 0.27
COL5A3-202ENST00000461214 FAM160B2Q86V87 743 aa16.75■□□□□ 0.27
COL5A3-202ENST00000461214 HSCBQ8IWL3 235 aa16.75■□□□□ 0.27
COL5A3-202ENST00000461214 GTF3C6Q969F1 213 aa16.75■□□□□ 0.27
COL5A3-202ENST00000461214 SHISA4Q96DD7 197 aa16.75■□□□□ 0.27
COL5A3-202ENST00000461214 LZTS2Q9BRK4 669 aa16.75■□□□□ 0.27
COL5A3-202ENST00000461214 TANGO6Q9C0B7 1094 aa16.75■□□□□ 0.27
COL5A3-202ENST00000461214 ARHGAP39Q9C0H5 1083 aa16.75■□□□□ 0.27
COL5A3-202ENST00000461214 RPAP3Q9H6T3 665 aaPredicted RBP16.75■□□□□ 0.27
COL5A3-202ENST00000461214 ZFYVE28Q9HCC9 887 aa16.75■□□□□ 0.27
COL5A3-202ENST00000461214 MAD2L2Q9UI95 211 aa16.75■□□□□ 0.27
COL5A3-202ENST00000461214 FEM1BQ9UK73 627 aa16.75■□□□□ 0.27
COL5A3-202ENST00000461214 PNMA3Q9UL41 463 aa16.75■□□□□ 0.27
COL5A3-202ENST00000461214 USP17L15C9J2P7 530 aa16.74■□□□□ 0.27
COL5A3-202ENST00000461214 USP17L13C9JLJ4 530 aa16.74■□□□□ 0.27
COL5A3-202ENST00000461214 USP17L11C9JVI0 530 aa16.74■□□□□ 0.27
COL5A3-202ENST00000461214 USP17L18D6R9N7 530 aa16.74■□□□□ 0.27
COL5A3-202ENST00000461214 USP17L22D6RA61 530 aa16.74■□□□□ 0.27
COL5A3-202ENST00000461214 USP17L17D6RBQ6 530 aa16.74■□□□□ 0.27
COL5A3-202ENST00000461214 USP17L19D6RCP7 530 aa16.74■□□□□ 0.27
COL5A3-202ENST00000461214 USP17L20D6RJB6 530 aa16.74■□□□□ 0.27
COL5A3-202ENST00000461214 K7ELQ4 463 aaPredicted RBP16.74■□□□□ 0.27
COL5A3-202ENST00000461214 SMARCA1P28370 1054 aa16.74■□□□□ 0.27
COL5A3-202ENST00000461214 USP17L24Q0WX57 530 aa16.74■□□□□ 0.27
COL5A3-202ENST00000461214 MTFR1Q15390 333 aa16.74■□□□□ 0.27
COL5A3-202ENST00000461214 ME3Q16798 604 aa16.74■□□□□ 0.27
COL5A3-202ENST00000461214 BTNL9Q6UXG8 535 aa16.74■□□□□ 0.27
COL5A3-202ENST00000461214 TMTC3Q6ZXV5 915 aa16.74■□□□□ 0.27
COL5A3-202ENST00000461214 BRI3BPQ8WY22 251 aa16.74■□□□□ 0.27
COL5A3-202ENST00000461214 HTATIP2Q9BUP3 242 aa16.74■□□□□ 0.27
COL5A3-202ENST00000461214 SPZ1Q9BXG8 430 aa16.74■□□□□ 0.27
COL5A3-202ENST00000461214 MTMR7Q9Y216 660 aa16.74■□□□□ 0.27
COL5A3-202ENST00000461214 LCTP09848 1927 aa16.74■□□□□ 0.27
COL5A3-202ENST00000461214 FRMPD2Q68DX3 1309 aaPredicted RBP16.73■□□□□ 0.27
COL5A3-202ENST00000461214 LARGE1O95461 756 aa16.73■□□□□ 0.27
COL5A3-202ENST00000461214 RXRAP19793 462 aa16.73■□□□□ 0.27
COL5A3-202ENST00000461214 CPLX2Q6PUV4 134 aaKnown RBP16.73■□□□□ 0.27
COL5A3-202ENST00000461214 CHURC1Q8WUH1 139 aa16.73■□□□□ 0.27
COL5A3-202ENST00000461214 NUP88Q99567 741 aaPredicted RBP16.73■□□□□ 0.27
COL5A3-202ENST00000461214 PRO3102Q9H379 93 aa16.73■□□□□ 0.27
COL5A3-202ENST00000461214 ISY1Q9ULR0 285 aaKnown RBP16.73■□□□□ 0.27
COL5A3-202ENST00000461214 NR2E3Q9Y5X4 410 aa16.73■□□□□ 0.27
COL5A3-202ENST00000461214 ZSWIM8A7E2V4 1837 aa16.73■□□□□ 0.27
COL5A3-202ENST00000461214 CNTNAP5Q8WYK1 1306 aa16.72■□□□□ 0.27
COL5A3-202ENST00000461214 KLRF2D3W0D1 207 aa16.72■□□□□ 0.27
COL5A3-202ENST00000461214 CDKL5O76039 1030 aa16.72■□□□□ 0.27
COL5A3-202ENST00000461214 FDX1P10109 184 aa16.72■□□□□ 0.27
COL5A3-202ENST00000461214 IRX3P78415 501 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms