RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 ABRAQ8N0Z2 381 aa26.52■■□□□ 1.84
TRAF4-207ENST00000461195 U2AF1L4Q8WU68 220 aaKnown RBP26.52■■□□□ 1.84
TRAF4-207ENST00000461195 SHISA4Q96DD7 197 aa26.52■■□□□ 1.84
TRAF4-207ENST00000461195 CCDC136Q96JN2 1154 aa26.52■■□□□ 1.84
TRAF4-207ENST00000461195 HMX1Q9NP08 348 aaPredicted RBP26.52■■□□□ 1.84
TRAF4-207ENST00000461195 SGSM2O43147 1006 aa26.51■■□□□ 1.83
TRAF4-207ENST00000461195 SGPL1O95470 568 aa26.51■■□□□ 1.83
TRAF4-207ENST00000461195 NEFLP07196 543 aa26.51■■□□□ 1.83
TRAF4-207ENST00000461195 PRKAR2AP13861 404 aaKnown RBP26.51■■□□□ 1.83
TRAF4-207ENST00000461195 STAT2P52630 851 aa26.51■■□□□ 1.83
TRAF4-207ENST00000461195 MAP3K21Q5TCX8 1036 aa26.51■■□□□ 1.83
TRAF4-207ENST00000461195 FAM160B2Q86V87 743 aa26.51■■□□□ 1.83
TRAF4-207ENST00000461195 CHURC1Q8WUH1 139 aa26.51■■□□□ 1.83
TRAF4-207ENST00000461195 CHMP4CQ96CF2 233 aa26.51■■□□□ 1.83
TRAF4-207ENST00000461195 TTC14Q96N46 770 aa26.51■■□□□ 1.83
TRAF4-207ENST00000461195 DEFB118Q96PH6 123 aa26.51■■□□□ 1.83
TRAF4-207ENST00000461195 TMEM47Q9BQJ4 181 aa26.51■■□□□ 1.83
TRAF4-207ENST00000461195 TEX13BQ9BXU2 312 aa26.51■■□□□ 1.83
TRAF4-207ENST00000461195 ZNFX1Q9P2E3 1918 aaKnown RBP26.51■■□□□ 1.83
TRAF4-207ENST00000461195 FCER1AP12319 257 aa26.5■■□□□ 1.83
TRAF4-207ENST00000461195 CAPN2P17655 700 aa26.5■■□□□ 1.83
TRAF4-207ENST00000461195 IKQ13123 557 aaPredicted RBP26.5■■□□□ 1.83
TRAF4-207ENST00000461195 RCSD1Q6JBY9 416 aa26.5■■□□□ 1.83
TRAF4-207ENST00000461195 NPLOC4Q8TAT6 608 aa26.5■■□□□ 1.83
TRAF4-207ENST00000461195 SLC38A10Q9HBR0 1119 aa26.5■■□□□ 1.83
TRAF4-207ENST00000461195 MTMR7Q9Y216 660 aa26.5■■□□□ 1.83
TRAF4-207ENST00000461195 ATP2A1O14983 1001 aa26.49■■□□□ 1.83
TRAF4-207ENST00000461195 PLA2G6O60733 806 aa26.49■■□□□ 1.83
TRAF4-207ENST00000461195 FDX1P10109 184 aa26.49■■□□□ 1.83
TRAF4-207ENST00000461195 CACNB2Q08289 660 aaPredicted RBP26.49■■□□□ 1.83
TRAF4-207ENST00000461195 SNRNP48Q6IEG0 339 aaKnown RBP26.49■■□□□ 1.83
TRAF4-207ENST00000461195 KCTD1Q719H9 257 aa26.49■■□□□ 1.83
TRAF4-207ENST00000461195 SKAP1Q86WV1 359 aa26.49■■□□□ 1.83
TRAF4-207ENST00000461195 DCAF4Q8WV16 495 aa26.49■■□□□ 1.83
TRAF4-207ENST00000461195 SLC5A4Q9NY91 659 aa26.49■■□□□ 1.83
TRAF4-207ENST00000461195 B4E1Z4 1266 aa26.48■■□□□ 1.83
TRAF4-207ENST00000461195 KDM4AO75164 1064 aa26.48■■□□□ 1.83
TRAF4-207ENST00000461195 PTH1RQ03431 593 aa26.48■■□□□ 1.83
TRAF4-207ENST00000461195 MFSD14CQ5VZR4 134 aa26.48■■□□□ 1.83
TRAF4-207ENST00000461195 IQCA1Q86XH1 822 aa26.48■■□□□ 1.83
TRAF4-207ENST00000461195 CPXCR1Q8N123 301 aa26.48■■□□□ 1.83
TRAF4-207ENST00000461195 MMP19Q99542 508 aa26.48■■□□□ 1.83
TRAF4-207ENST00000461195 KRT23Q9C075 422 aa26.48■■□□□ 1.83
TRAF4-207ENST00000461195 CNNM2Q9H8M5 875 aa26.48■■□□□ 1.83
TRAF4-207ENST00000461195 FLRT1Q9NZU1 646 aa26.48■■□□□ 1.83
TRAF4-207ENST00000461195 COBLO75128 1261 aa26.47■■□□□ 1.83
TRAF4-207ENST00000461195 TFRCP02786 760 aaKnown RBP26.47■■□□□ 1.83
TRAF4-207ENST00000461195 OAZ1P54368 228 aa26.47■■□□□ 1.83
TRAF4-207ENST00000461195 CCDC96Q2M329 555 aa26.47■■□□□ 1.83
TRAF4-207ENST00000461195 CCDC178Q5BJE1 867 aa26.47■■□□□ 1.83
TRAF4-207ENST00000461195 ZKSCAN3Q9BRR0 538 aa26.47■■□□□ 1.83
TRAF4-207ENST00000461195 RAVER2Q9HCJ3 691 aaKnown RBP26.47■■□□□ 1.83
TRAF4-207ENST00000461195 U3KPZ7 1027 aaPredicted RBP26.47■■□□□ 1.83
TRAF4-207ENST00000461195 CEP290O15078 2479 aa26.46■■□□□ 1.83
TRAF4-207ENST00000461195 KCTD2Q14681 263 aa26.46■■□□□ 1.83
TRAF4-207ENST00000461195 BMP2KLQ5H9B9 411 aa26.46■■□□□ 1.83
TRAF4-207ENST00000461195 RASGRP2Q7LDG7 609 aa26.46■■□□□ 1.83
TRAF4-207ENST00000461195 DGKHQ86XP1 1220 aa26.46■■□□□ 1.83
TRAF4-207ENST00000461195 CRISPLD2Q9H0B8 497 aa26.46■■□□□ 1.83
TRAF4-207ENST00000461195 SLC4A3P48751 1232 aa26.45■■□□□ 1.82
TRAF4-207ENST00000461195 OLFML2BQ68BL8 750 aa26.45■■□□□ 1.82
TRAF4-207ENST00000461195 ZSWIM5Q9P217 1185 aa26.45■■□□□ 1.82
TRAF4-207ENST00000461195 RIPK3Q9Y572 518 aa26.45■■□□□ 1.82
TRAF4-207ENST00000461195 PRR12Q9ULL5 1215 aa26.44■■□□□ 1.82
TRAF4-207ENST00000461195 PLXNA1Q9UIW2 1896 aa26.44■■□□□ 1.82
TRAF4-207ENST00000461195 IGHA2P01877 340 aa26.43■■□□□ 1.82
TRAF4-207ENST00000461195 CYP21A2P08686 494 aa26.43■■□□□ 1.82
TRAF4-207ENST00000461195 CCND3P30281 292 aaPredicted RBP26.43■■□□□ 1.82
TRAF4-207ENST00000461195 ZSCAN10Q96SZ4 725 aaPredicted RBP26.43■■□□□ 1.82
TRAF4-207ENST00000461195 FARP2O94887 1054 aaPredicted RBP26.42■■□□□ 1.82
TRAF4-207ENST00000461195 PGK2P07205 417 aa26.42■■□□□ 1.82
TRAF4-207ENST00000461195 PDHBP11177 359 aa26.42■■□□□ 1.82
TRAF4-207ENST00000461195 CYP2C19P33261 490 aa26.42■■□□□ 1.82
TRAF4-207ENST00000461195 TRDNQ13061 729 aa26.42■■□□□ 1.82
TRAF4-207ENST00000461195 KIAA1211Q6ZU35 1233 aa26.42■■□□□ 1.82
TRAF4-207ENST00000461195 UBE2Q1Q7Z7E8 422 aa26.42■■□□□ 1.82
TRAF4-207ENST00000461195 ANKS1AQ92625 1134 aa26.42■■□□□ 1.82
TRAF4-207ENST00000461195 MAP4K1Q92918 833 aa26.42■■□□□ 1.82
TRAF4-207ENST00000461195 MAML3Q96JK9 1138 aa26.42■■□□□ 1.82
TRAF4-207ENST00000461195 FBXO40Q9UH90 709 aa26.42■■□□□ 1.82
TRAF4-207ENST00000461195 FRMPD2Q68DX3 1309 aaPredicted RBP26.41■■□□□ 1.82
TRAF4-207ENST00000461195 TTBK2Q6IQ55 1244 aa26.41■■□□□ 1.82
TRAF4-207ENST00000461195 BTNL9Q6UXG8 535 aa26.41■■□□□ 1.82
TRAF4-207ENST00000461195 CHST13Q8NET6 341 aa26.41■■□□□ 1.82
TRAF4-207ENST00000461195 ESYT1Q9BSJ8 1104 aa26.41■■□□□ 1.82
TRAF4-207ENST00000461195 UBAC1Q9BSL1 405 aa26.41■■□□□ 1.82
TRAF4-207ENST00000461195 GPCPD1Q9NPB8 672 aa26.41■■□□□ 1.82
TRAF4-207ENST00000461195 DIS3Q9Y2L1 958 aaKnown RBP26.41■■□□□ 1.82
TRAF4-207ENST00000461195 TNKSO95271 1327 aa26.4■■□□□ 1.82
TRAF4-207ENST00000461195 SNHG28P0DPA3 235 aa26.4■■□□□ 1.82
TRAF4-207ENST00000461195 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.4■■□□□ 1.82
TRAF4-207ENST00000461195 ENAHQ8N8S7 591 aaPredicted RBP26.4■■□□□ 1.82
TRAF4-207ENST00000461195 DDX11Q96FC9 970 aa26.4■■□□□ 1.82
TRAF4-207ENST00000461195 KAT14Q9H8E8 782 aa26.4■■□□□ 1.82
TRAF4-207ENST00000461195 ZNF536O15090 1300 aa26.39■■□□□ 1.82
TRAF4-207ENST00000461195 SLC16A2P36021 539 aa26.39■■□□□ 1.82
TRAF4-207ENST00000461195 ZNF543Q08ER8 600 aa26.39■■□□□ 1.82
TRAF4-207ENST00000461195 ZNF792Q3KQV3 632 aa26.39■■□□□ 1.82
TRAF4-207ENST00000461195 SYDE2Q5VT97 1194 aa26.39■■□□□ 1.82
TRAF4-207ENST00000461195 CCDC174Q6PII3 467 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms