RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 MBD1Q9UIS9 605 aaPredicted RBP5.9□□□□□ -1.46
SPTLC1-203ENST00000461132 FBXL21Q9UKT6 434 aa5.9□□□□□ -1.46
SPTLC1-203ENST00000461132 WTIPA6NIX2 430 aaPredicted RBP5.89□□□□□ -1.47
SPTLC1-203ENST00000461132 N4BP3O15049 544 aa5.89□□□□□ -1.47
SPTLC1-203ENST00000461132 UBOX5O94941 541 aa5.89□□□□□ -1.47
SPTLC1-203ENST00000461132 PRAMEF1O95521 474 aa5.89□□□□□ -1.47
SPTLC1-203ENST00000461132 SYN1P17600 705 aa5.89□□□□□ -1.47
SPTLC1-203ENST00000461132 MCM4P33991 863 aa5.89□□□□□ -1.47
SPTLC1-203ENST00000461132 EIF4A3P38919 411 aaKnown RBP5.89□□□□□ -1.47
SPTLC1-203ENST00000461132 SSPNQ14714 243 aa5.89□□□□□ -1.47
SPTLC1-203ENST00000461132 NBPF9Q3BBW0 867 aa5.89□□□□□ -1.47
SPTLC1-203ENST00000461132 NBPF12Q5TAG4 269 aaPredicted RBP5.89□□□□□ -1.47
SPTLC1-203ENST00000461132 MARCH10Q8NA82 808 aaPredicted RBP5.89□□□□□ -1.47
SPTLC1-203ENST00000461132 VWCEQ96DN2 955 aa5.89□□□□□ -1.47
SPTLC1-203ENST00000461132 C20orf173Q96LM9 149 aa5.89□□□□□ -1.47
SPTLC1-203ENST00000461132 CDADC1Q9BWV3 514 aa5.89□□□□□ -1.47
SPTLC1-203ENST00000461132 CHST7Q9NS84 486 aa5.89□□□□□ -1.47
SPTLC1-203ENST00000461132 MEIS1O00470 390 aa5.88□□□□□ -1.47
SPTLC1-203ENST00000461132 SIGLEC6O43699 453 aa5.88□□□□□ -1.47
SPTLC1-203ENST00000461132 FOXD2O60548 495 aaPredicted RBP5.88□□□□□ -1.47
SPTLC1-203ENST00000461132 VIPR1P32241 457 aa5.88□□□□□ -1.47
SPTLC1-203ENST00000461132 CCNFP41002 786 aa5.88□□□□□ -1.47
SPTLC1-203ENST00000461132 LAPTM5Q13571 262 aa5.88□□□□□ -1.47
SPTLC1-203ENST00000461132 OVOS1Q6IE37 1185 aa5.88□□□□□ -1.47
SPTLC1-203ENST00000461132 HHIPL1Q96JK4 782 aa5.88□□□□□ -1.47
SPTLC1-203ENST00000461132 KCNC2Q96PR1 638 aa5.88□□□□□ -1.47
SPTLC1-203ENST00000461132 ZNF281Q9Y2X9 895 aa5.88□□□□□ -1.47
SPTLC1-203ENST00000461132 PCDHB12Q9Y5F1 795 aa5.88□□□□□ -1.47
SPTLC1-203ENST00000461132 ZNF16P17020 682 aaPredicted RBP5.87□□□□□ -1.47
SPTLC1-203ENST00000461132 SDHBP21912 280 aa5.87□□□□□ -1.47
SPTLC1-203ENST00000461132 POLR2BP30876 1174 aaKnown RBP5.87□□□□□ -1.47
SPTLC1-203ENST00000461132 RAB3GAP1Q15042 981 aa5.87□□□□□ -1.47
SPTLC1-203ENST00000461132 LRRFIP1Q32MZ4 808 aaKnown RBP5.87□□□□□ -1.47
SPTLC1-203ENST00000461132 CNKSR3Q6P9H4 555 aa5.87□□□□□ -1.47
SPTLC1-203ENST00000461132 FBXL19Q6PCT2 694 aa5.87□□□□□ -1.47
SPTLC1-203ENST00000461132 GK5Q6ZS86 529 aa5.87□□□□□ -1.47
SPTLC1-203ENST00000461132 NLRC3Q7RTR2 1065 aa5.87□□□□□ -1.47
SPTLC1-203ENST00000461132 SP8Q8IXZ3 490 aa5.87□□□□□ -1.47
SPTLC1-203ENST00000461132 NAT16Q8N8M0 369 aa5.87□□□□□ -1.47
SPTLC1-203ENST00000461132 ZNF512BQ96KM6 892 aaPredicted RBP5.87□□□□□ -1.47
SPTLC1-203ENST00000461132 DSCC1Q9BVC3 393 aa5.87□□□□□ -1.47
SPTLC1-203ENST00000461132 LRRC3Q9BY71 257 aa5.87□□□□□ -1.47
SPTLC1-203ENST00000461132 PRDM14Q9GZV8 571 aa5.87□□□□□ -1.47
SPTLC1-203ENST00000461132 GPR55Q9Y2T6 319 aaPredicted RBP5.87□□□□□ -1.47
SPTLC1-203ENST00000461132 A0A1W2PQJ5 194 aa5.86□□□□□ -1.47
SPTLC1-203ENST00000461132 TMEM82A0PJX8 343 aa5.86□□□□□ -1.47
SPTLC1-203ENST00000461132 NOTOA8MTQ0 251 aa5.86□□□□□ -1.47
SPTLC1-203ENST00000461132 TRIM13O60858 407 aa5.86□□□□□ -1.47
SPTLC1-203ENST00000461132 PRKCAP17252 672 aa5.86□□□□□ -1.47
SPTLC1-203ENST00000461132 ZNF165P49910 485 aa5.86□□□□□ -1.47
SPTLC1-203ENST00000461132 EPHB3P54753 998 aa5.86□□□□□ -1.47
SPTLC1-203ENST00000461132 CYP4F8P98187 520 aa5.86□□□□□ -1.47
SPTLC1-203ENST00000461132 SNW1Q13573 536 aaKnown RBP5.86□□□□□ -1.47
SPTLC1-203ENST00000461132 BBS9Q3SYG4 887 aa5.86□□□□□ -1.47
SPTLC1-203ENST00000461132 CDCP2Q5VXM1 449 aa5.86□□□□□ -1.47
SPTLC1-203ENST00000461132 ZPBP2Q6X784 338 aa5.86□□□□□ -1.47
SPTLC1-203ENST00000461132 HS2ST1Q7LGA3 356 aa5.86□□□□□ -1.47
SPTLC1-203ENST00000461132 TMC6Q7Z403 805 aa5.86□□□□□ -1.47
SPTLC1-203ENST00000461132 NUP43Q8NFH3 380 aa5.86□□□□□ -1.47
SPTLC1-203ENST00000461132 MZB1Q8WU39 189 aa5.86□□□□□ -1.47
SPTLC1-203ENST00000461132 KRTAP4-11Q9BYQ6 195 aa5.86□□□□□ -1.47
SPTLC1-203ENST00000461132 CNNM2Q9H8M5 875 aa5.86□□□□□ -1.47
SPTLC1-203ENST00000461132 GGT7Q9UJ14 662 aa5.86□□□□□ -1.47
SPTLC1-203ENST00000461132 A0A0G2JLL6 359 aaPredicted RBP5.85□□□□□ -1.47
SPTLC1-203ENST00000461132 A0A1W2PQ45 241 aaPredicted RBP5.85□□□□□ -1.47
SPTLC1-203ENST00000461132 A0A1W2PQY0 241 aa5.85□□□□□ -1.47
SPTLC1-203ENST00000461132 NUDT19A8MXV4 375 aa5.85□□□□□ -1.47
SPTLC1-203ENST00000461132 ATE1O95260 518 aa5.85□□□□□ -1.47
SPTLC1-203ENST00000461132 GARTP22102 1010 aa5.85□□□□□ -1.47
SPTLC1-203ENST00000461132 ERVFRD-1P60508 538 aa5.85□□□□□ -1.47
SPTLC1-203ENST00000461132 APOBRQ0VD83 1088 aa5.85□□□□□ -1.47
SPTLC1-203ENST00000461132 HSF5Q4G112 596 aaPredicted RBP5.85□□□□□ -1.47
SPTLC1-203ENST00000461132 SEZ6Q53EL9 994 aa5.85□□□□□ -1.47
SPTLC1-203ENST00000461132 CWF19L1Q69YN2 538 aaKnown RBP5.85□□□□□ -1.47
SPTLC1-203ENST00000461132 PANK1Q8TE04 598 aa5.85□□□□□ -1.47
SPTLC1-203ENST00000461132 ZNF296Q8WUU4 475 aaPredicted RBP5.85□□□□□ -1.47
SPTLC1-203ENST00000461132 EAF1Q96JC9 268 aaPredicted RBP5.85□□□□□ -1.47
SPTLC1-203ENST00000461132 PLCD4Q9BRC7 762 aa5.85□□□□□ -1.47
SPTLC1-203ENST00000461132 CNTD2Q9H8S5 307 aa5.85□□□□□ -1.47
SPTLC1-203ENST00000461132 GFOD1Q9NXC2 390 aa5.85□□□□□ -1.47
SPTLC1-203ENST00000461132 RTEL1Q9NZ71 1219 aa5.85□□□□□ -1.47
SPTLC1-203ENST00000461132 FADS2P1A8MWK0 482 aa5.84□□□□□ -1.47
SPTLC1-203ENST00000461132 YBX1P67809 324 aaKnown RBP5.84□□□□□ -1.47
SPTLC1-203ENST00000461132 ERMP1Q7Z2K6 904 aa5.84□□□□□ -1.47
SPTLC1-203ENST00000461132 JAMLQ86YT9 394 aa5.84□□□□□ -1.47
SPTLC1-203ENST00000461132 NLGN1Q8N2Q7 840 aa5.84□□□□□ -1.47
SPTLC1-203ENST00000461132 RGS22Q8NE09 1264 aa5.84□□□□□ -1.47
SPTLC1-203ENST00000461132 DACT3Q96B18 629 aaPredicted RBP5.84□□□□□ -1.47
SPTLC1-203ENST00000461132 ATG4CQ96DT6 458 aa5.84□□□□□ -1.47
SPTLC1-203ENST00000461132 COPRSQ9NQ92 184 aa5.84□□□□□ -1.47
SPTLC1-203ENST00000461132 CELA3BP08861 270 aa5.83□□□□□ -1.48
SPTLC1-203ENST00000461132 PFKLP17858 780 aa5.83□□□□□ -1.48
SPTLC1-203ENST00000461132 BMP8BP34820 402 aa5.83□□□□□ -1.48
SPTLC1-203ENST00000461132 CDR1P51861 262 aa5.83□□□□□ -1.48
SPTLC1-203ENST00000461132 VMACQ2NL98 169 aa5.83□□□□□ -1.48
SPTLC1-203ENST00000461132 LCE5AQ5TCM9 118 aa5.83□□□□□ -1.48
SPTLC1-203ENST00000461132 REXO1Q8N1G1 1221 aaKnown RBP5.83□□□□□ -1.48
SPTLC1-203ENST00000461132 TMEM87AQ8NBN3 555 aa5.83□□□□□ -1.48
SPTLC1-203ENST00000461132 NKD1Q969G9 470 aa5.83□□□□□ -1.48
SPTLC1-203ENST00000461132 DHRS1Q96LJ7 313 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms