RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 ADAMTS4O75173 837 aa16.33■□□□□ 0.2
SCAMP4-206ENST00000460767 FCER1AP12319 257 aa16.33■□□□□ 0.2
SCAMP4-206ENST00000460767 AKR1A1P14550 325 aa16.33■□□□□ 0.2
SCAMP4-206ENST00000460767 FAAP100Q0VG06 881 aa16.33■□□□□ 0.2
SCAMP4-206ENST00000460767 PRAMEF19Q5SWL8 479 aa16.33■□□□□ 0.2
SCAMP4-206ENST00000460767 TANGO6Q9C0B7 1094 aa16.33■□□□□ 0.2
SCAMP4-206ENST00000460767 THEGQ9P2T0 379 aa16.33■□□□□ 0.2
SCAMP4-206ENST00000460767 TBX21Q9UL17 535 aa16.33■□□□□ 0.2
SCAMP4-206ENST00000460767 ADAMTS5Q9UNA0 930 aa16.33■□□□□ 0.2
SCAMP4-206ENST00000460767 MYH8P13535 1937 aa16.33■□□□□ 0.2
SCAMP4-206ENST00000460767 SMCHD1A6NHR9 2005 aa16.33■□□□□ 0.2
SCAMP4-206ENST00000460767 SMIM22K7EJ46 135 aa16.32■□□□□ 0.2
SCAMP4-206ENST00000460767 GPAA1O43292 621 aa16.32■□□□□ 0.2
SCAMP4-206ENST00000460767 C12orf60Q5U649 245 aa16.32■□□□□ 0.2
SCAMP4-206ENST00000460767 MROH7Q68CQ1 1323 aa16.32■□□□□ 0.2
SCAMP4-206ENST00000460767 CCDC174Q6PII3 467 aa16.32■□□□□ 0.2
SCAMP4-206ENST00000460767 TMEM179Q6ZVK1 233 aa16.32■□□□□ 0.2
SCAMP4-206ENST00000460767 NCAPG2Q86XI2 1143 aa16.32■□□□□ 0.2
SCAMP4-206ENST00000460767 MSL3Q8N5Y2 521 aaKnown RBP16.32■□□□□ 0.2
SCAMP4-206ENST00000460767 ASB2Q96Q27 587 aa16.32■□□□□ 0.2
SCAMP4-206ENST00000460767 SEC62Q99442 399 aaKnown RBP16.32■□□□□ 0.2
SCAMP4-206ENST00000460767 GAS2L1Q99501 681 aaPredicted RBP16.32■□□□□ 0.2
SCAMP4-206ENST00000460767 TINF2Q9BSI4 451 aa16.32■□□□□ 0.2
SCAMP4-206ENST00000460767 EPB41L4AQ9HCS5 686 aaPredicted RBP16.32■□□□□ 0.2
SCAMP4-206ENST00000460767 TMEM39AQ9NV64 488 aa16.32■□□□□ 0.2
SCAMP4-206ENST00000460767 ZBTB47Q9UFB7 747 aaPredicted RBP16.32■□□□□ 0.2
SCAMP4-206ENST00000460767 DCDC2CA8MYV0 355 aa16.31■□□□□ 0.2
SCAMP4-206ENST00000460767 WDR46O15213 610 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-206ENST00000460767 PQBP1O60828 265 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-206ENST00000460767 TIMP1P01033 207 aa16.31■□□□□ 0.2
SCAMP4-206ENST00000460767 MYCNP04198 464 aaPredicted RBP16.31■□□□□ 0.2
SCAMP4-206ENST00000460767 ZNF865P0CJ78 1059 aaPredicted RBP16.31■□□□□ 0.2
SCAMP4-206ENST00000460767 CST5P28325 142 aaPredicted RBP16.31■□□□□ 0.2
SCAMP4-206ENST00000460767 COPB2P35606 906 aa16.31■□□□□ 0.2
SCAMP4-206ENST00000460767 LRRFIP1Q32MZ4 808 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-206ENST00000460767 ZNF792Q3KQV3 632 aa16.31■□□□□ 0.2
SCAMP4-206ENST00000460767 SBK1Q52WX2 424 aa16.31■□□□□ 0.2
SCAMP4-206ENST00000460767 MFSD5Q6N075 450 aa16.31■□□□□ 0.2
SCAMP4-206ENST00000460767 SLC44A5Q8NCS7 719 aa16.31■□□□□ 0.2
SCAMP4-206ENST00000460767 NUP133Q8WUM0 1156 aa16.31■□□□□ 0.2
SCAMP4-206ENST00000460767 FSD1Q9BTV5 496 aa16.31■□□□□ 0.2
SCAMP4-206ENST00000460767 SH2D4AQ9H788 454 aa16.31■□□□□ 0.2
SCAMP4-206ENST00000460767 MCM9Q9NXL9 1143 aa16.31■□□□□ 0.2
SCAMP4-206ENST00000460767 TMX2Q9Y320 296 aa16.31■□□□□ 0.2
SCAMP4-206ENST00000460767 FLOT1O75955 427 aa16.3■□□□□ 0.2
SCAMP4-206ENST00000460767 PGK1P00558 417 aa16.3■□□□□ 0.2
SCAMP4-206ENST00000460767 CYP2D6P10635 497 aa16.3■□□□□ 0.2
SCAMP4-206ENST00000460767 PPIGQ13427 754 aaKnown RBP eCLIP16.3■□□□□ 0.25e-11■□□□□ 9.3
SCAMP4-206ENST00000460767 KIAA1755Q5JYT7 1200 aa16.3■□□□□ 0.2
SCAMP4-206ENST00000460767 CCSAPQ6IQ19 270 aaPredicted RBP16.3■□□□□ 0.2
SCAMP4-206ENST00000460767 CTR9Q6PD62 1173 aa16.3■□□□□ 0.2
SCAMP4-206ENST00000460767 RIOX2Q8IUF8 465 aa16.3■□□□□ 0.2
SCAMP4-206ENST00000460767 KLHDC9Q8NEP7 349 aa16.3■□□□□ 0.2
SCAMP4-206ENST00000460767 ADAMTS19Q8TE59 1207 aa16.3■□□□□ 0.2
SCAMP4-206ENST00000460767 ATG4CQ96DT6 458 aa16.3■□□□□ 0.2
SCAMP4-206ENST00000460767 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.3■□□□□ 0.21e-8■□□□□ 8.6
SCAMP4-206ENST00000460767 PBX4Q9BYU1 374 aa16.3■□□□□ 0.2
SCAMP4-206ENST00000460767 VCPKMTQ9H867 229 aa16.3■□□□□ 0.2
SCAMP4-206ENST00000460767 STARD7Q9NQZ5 370 aa16.3■□□□□ 0.2
SCAMP4-206ENST00000460767 SWAP70Q9UH65 585 aa16.3■□□□□ 0.2
SCAMP4-206ENST00000460767 SLC4A4Q9Y6R1 1079 aa16.3■□□□□ 0.2
SCAMP4-206ENST00000460767 ELP1O95163 1332 aa16.29■□□□□ 0.2
SCAMP4-206ENST00000460767 SYNRGQ9UMZ2 1314 aa16.29■□□□□ 0.2
SCAMP4-206ENST00000460767 USP17L12C9JPN9 530 aa16.29■□□□□ 0.2
SCAMP4-206ENST00000460767 USP17L21D6R901 530 aa16.29■□□□□ 0.2
SCAMP4-206ENST00000460767 GSPT1P15170 499 aaKnown RBP16.29■□□□□ 0.2
SCAMP4-206ENST00000460767 GNAT2P19087 354 aa16.29■□□□□ 0.2
SCAMP4-206ENST00000460767 ACLYP53396 1101 aa16.29■□□□□ 0.2
SCAMP4-206ENST00000460767 TMEM132BQ14DG7 1078 aa16.29■□□□□ 0.2
SCAMP4-206ENST00000460767 MMP19Q99542 508 aa16.29■□□□□ 0.2
SCAMP4-206ENST00000460767 ARHGEF10LQ9HCE6 1279 aa16.29■□□□□ 0.2
SCAMP4-206ENST00000460767 ARIH1Q9Y4X5 557 aaPredicted RBP16.29■□□□□ 0.2
SCAMP4-206ENST00000460767 SYNGAP1Q96PV0 1343 aa16.28■□□□□ 0.2
SCAMP4-206ENST00000460767 CYP2D7A0A087X1C5 515 aa16.28■□□□□ 0.2
SCAMP4-206ENST00000460767 A0A0D9SFI3 127 aa16.28■□□□□ 0.2
SCAMP4-206ENST00000460767 POLR3DP05423 398 aaPredicted RBP16.28■□□□□ 0.2
SCAMP4-206ENST00000460767 MRPS5P82675 430 aaKnown RBP16.28■□□□□ 0.2
SCAMP4-206ENST00000460767 PLS1Q14651 629 aa16.28■□□□□ 0.2
SCAMP4-206ENST00000460767 KCTD2Q14681 263 aa16.28■□□□□ 0.2
SCAMP4-206ENST00000460767 TMEM240Q5SV17 173 aa16.28■□□□□ 0.2
SCAMP4-206ENST00000460767 PSRC1Q6PGN9 363 aaPredicted RBP16.28■□□□□ 0.2
SCAMP4-206ENST00000460767 C16orf86Q6ZW13 317 aa16.28■□□□□ 0.2
SCAMP4-206ENST00000460767 SIAH1Q8IUQ4 282 aa16.28■□□□□ 0.2
SCAMP4-206ENST00000460767 HELLSQ9NRZ9 838 aa16.28■□□□□ 0.2
SCAMP4-206ENST00000460767 CNPY2Q9Y2B0 182 aa16.28■□□□□ 0.2
SCAMP4-206ENST00000460767 PATL2C9JE40 543 aaKnown RBP16.27■□□□□ 0.2
SCAMP4-206ENST00000460767 CDK7P50613 346 aa16.27■□□□□ 0.2
SCAMP4-206ENST00000460767 RAB30Q15771 203 aa16.27■□□□□ 0.2
SCAMP4-206ENST00000460767 TTC22Q5TAA0 569 aa16.27■□□□□ 0.2
SCAMP4-206ENST00000460767 MAMDC4Q6UXC1 1216 aa16.27■□□□□ 0.2
SCAMP4-206ENST00000460767 C16orf59Q7L2K0 433 aa16.27■□□□□ 0.2
SCAMP4-206ENST00000460767 FAM227BQ96M60 508 aa16.27■□□□□ 0.2
SCAMP4-206ENST00000460767 UHRF1Q96T88 793 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-206ENST00000460767 ARPP21Q9UBL0 812 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-206ENST00000460767 ZNF214Q9UL59 606 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-206ENST00000460767 MPHOSPH10O00566 681 aaKnown RBP16.26■□□□□ 0.19
SCAMP4-206ENST00000460767 TAL1P17542 331 aaPredicted RBP16.26■□□□□ 0.19
SCAMP4-206ENST00000460767 NKX3-2P78367 333 aa16.26■□□□□ 0.19
SCAMP4-206ENST00000460767 ICA1Q05084 483 aa16.26■□□□□ 0.19
SCAMP4-206ENST00000460767 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms