RNA–Protein interactions for RNA: ENST00000460023.5

CCDC78-205, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-205ENST00000460023 IGHA2P01877 340 aa25.37■■□□□ 1.65
CCDC78-205ENST00000460023 SLC1A4P43007 532 aa25.37■■□□□ 1.65
CCDC78-205ENST00000460023 LRRC47Q8N1G4 583 aaKnown RBP25.37■■□□□ 1.65
CCDC78-205ENST00000460023 PAWRQ96IZ0 340 aaKnown RBP25.37■■□□□ 1.65
CCDC78-205ENST00000460023 IL17RBQ9NRM6 502 aa25.37■■□□□ 1.65
CCDC78-205ENST00000460023 FLRT1Q9NZU1 646 aa25.37■■□□□ 1.65
CCDC78-205ENST00000460023 ZNF213O14771 459 aa25.36■■□□□ 1.65
CCDC78-205ENST00000460023 STAT2P52630 851 aa25.36■■□□□ 1.65
CCDC78-205ENST00000460023 AKNAD1Q5T1N1 836 aa25.36■■□□□ 1.65
CCDC78-205ENST00000460023 TTC14Q96N46 770 aa25.36■■□□□ 1.65
CCDC78-205ENST00000460023 SLC38A10Q9HBR0 1119 aa25.36■■□□□ 1.65
CCDC78-205ENST00000460023 NRBP1Q9UHY1 535 aa25.36■■□□□ 1.65
CCDC78-205ENST00000460023 COBLO75128 1261 aa25.35■■□□□ 1.65
CCDC78-205ENST00000460023 CCND3P30281 292 aaPredicted RBP25.35■■□□□ 1.65
CCDC78-205ENST00000460023 LHX8Q68G74 356 aa25.35■■□□□ 1.65
CCDC78-205ENST00000460023 SNRNP48Q6IEG0 339 aaKnown RBP25.35■■□□□ 1.65
CCDC78-205ENST00000460023 RCSD1Q6JBY9 416 aa25.35■■□□□ 1.65
CCDC78-205ENST00000460023 STAG1Q8WVM7 1258 aa25.35■■□□□ 1.65
CCDC78-205ENST00000460023 KIFC2Q96AC6 838 aa25.35■■□□□ 1.65
CCDC78-205ENST00000460023 DSCC1Q9BVC3 393 aa25.35■■□□□ 1.65
CCDC78-205ENST00000460023 INCENPQ9NQS7 918 aa25.35■■□□□ 1.65
CCDC78-205ENST00000460023 FBXO40Q9UH90 709 aa25.35■■□□□ 1.65
CCDC78-205ENST00000460023 CTNNA3Q9UI47 895 aa25.35■■□□□ 1.65
CCDC78-205ENST00000460023 MAML3Q96JK9 1138 aa25.34■■□□□ 1.65
CCDC78-205ENST00000460023 DDX20Q9UHI6 824 aaKnown RBP25.34■■□□□ 1.65
CCDC78-205ENST00000460023 COL11A1P12107 1806 aaPredicted RBP25.34■■□□□ 1.65
CCDC78-205ENST00000460023 TMEM232C9JQI7 657 aa25.33■■□□□ 1.65
CCDC78-205ENST00000460023 EVI5O60447 810 aa25.33■■□□□ 1.65
CCDC78-205ENST00000460023 CNGA1P29973 690 aa25.33■■□□□ 1.65
CCDC78-205ENST00000460023 CYP2C19P33261 490 aa25.33■■□□□ 1.65
CCDC78-205ENST00000460023 IRX6P78412 446 aaPredicted RBP25.33■■□□□ 1.65
CCDC78-205ENST00000460023 CCDC178Q5BJE1 867 aa25.33■■□□□ 1.65
CCDC78-205ENST00000460023 RRP12Q5JTH9 1297 aaKnown RBP25.33■■□□□ 1.65
CCDC78-205ENST00000460023 TTC22Q5TAA0 569 aa25.33■■□□□ 1.65
CCDC78-205ENST00000460023 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.33■■□□□ 1.65
CCDC78-205ENST00000460023 MSL3Q8N5Y2 521 aaKnown RBP25.33■■□□□ 1.65
CCDC78-205ENST00000460023 CHST13Q8NET6 341 aa25.33■■□□□ 1.65
CCDC78-205ENST00000460023 ESR2Q92731 530 aa25.33■■□□□ 1.65
CCDC78-205ENST00000460023 C11orf49Q9H6J7 331 aa25.33■■□□□ 1.65
CCDC78-205ENST00000460023 ZNFX1Q9P2E3 1918 aaKnown RBP25.32■■□□□ 1.64
CCDC78-205ENST00000460023 TOP1P11387 765 aaKnown RBP25.32■■□□□ 1.64
CCDC78-205ENST00000460023 CYBAP13498 195 aa25.32■■□□□ 1.64
CCDC78-205ENST00000460023 MCCP23508 829 aa25.32■■□□□ 1.64
CCDC78-205ENST00000460023 CPXCR1Q8N123 301 aa25.32■■□□□ 1.64
CCDC78-205ENST00000460023 DCAF4Q8WV16 495 aa25.32■■□□□ 1.64
CCDC78-205ENST00000460023 RUFY2Q8WXA3 655 aa25.32■■□□□ 1.64
CCDC78-205ENST00000460023 DDX11Q96FC9 970 aa25.32■■□□□ 1.64
CCDC78-205ENST00000460023 HAND2P61296 217 aa25.31■■□□□ 1.64
CCDC78-205ENST00000460023 IKQ13123 557 aaPredicted RBP25.31■■□□□ 1.64
CCDC78-205ENST00000460023 ISY1Q9ULR0 285 aaKnown RBP25.31■■□□□ 1.64
CCDC78-205ENST00000460023 TACC3Q9Y6A5 838 aa25.31■■□□□ 1.64
CCDC78-205ENST00000460023 H0YGN5 161 aa25.3■■□□□ 1.64
CCDC78-205ENST00000460023 SEPT4O43236 478 aa25.3■■□□□ 1.64
CCDC78-205ENST00000460023 NMT2O60551 498 aa25.3■■□□□ 1.64
CCDC78-205ENST00000460023 PDE4AP27815 886 aa25.3■■□□□ 1.64
CCDC78-205ENST00000460023 IMMTQ16891 758 aaKnown RBP25.3■■□□□ 1.64
CCDC78-205ENST00000460023 ZNF792Q3KQV3 632 aa25.3■■□□□ 1.64
CCDC78-205ENST00000460023 MNX1P50219 401 aaPredicted RBP25.29■■□□□ 1.64
CCDC78-205ENST00000460023 TKFCQ3LXA3 575 aa25.29■■□□□ 1.64
CCDC78-205ENST00000460023 ARRDC4Q8NCT1 418 aa25.29■■□□□ 1.64
CCDC78-205ENST00000460023 TINF2Q9BSI4 451 aa25.29■■□□□ 1.64
CCDC78-205ENST00000460023 RAVER2Q9HCJ3 691 aaKnown RBP25.29■■□□□ 1.64
CCDC78-205ENST00000460023 RAD50Q92878 1312 aa25.29■■□□□ 1.64
CCDC78-205ENST00000460023 IQCA1Q86XH1 822 aa25.28■■□□□ 1.64
CCDC78-205ENST00000460023 DGKHQ86XP1 1220 aa25.28■■□□□ 1.64
CCDC78-205ENST00000460023 DIS3LQ8TF46 1054 aaKnown RBP25.28■■□□□ 1.64
CCDC78-205ENST00000460023 TMEM47Q9BQJ4 181 aa25.28■■□□□ 1.64
CCDC78-205ENST00000460023 PNMA2Q9UL42 364 aa25.28■■□□□ 1.64
CCDC78-205ENST00000460023 RIPK3Q9Y572 518 aa25.28■■□□□ 1.64
CCDC78-205ENST00000460023 PGK2P07205 417 aa25.27■■□□□ 1.64
CCDC78-205ENST00000460023 ZNF467Q7Z7K2 595 aaPredicted RBP25.27■■□□□ 1.64
CCDC78-205ENST00000460023 ANKRD35Q8N283 1001 aa25.27■■□□□ 1.64
CCDC78-205ENST00000460023 DNAJC25-GNG10A0A024R161 153 aa25.26■■□□□ 1.63
CCDC78-205ENST00000460023 COL6A1P12109 1028 aa25.26■■□□□ 1.63
CCDC78-205ENST00000460023 GSPT1P15170 499 aaKnown RBP25.26■■□□□ 1.63
CCDC78-205ENST00000460023 BTNL9Q6UXG8 535 aa25.26■■□□□ 1.63
CCDC78-205ENST00000460023 KCTD1Q719H9 257 aa25.26■■□□□ 1.63
CCDC78-205ENST00000460023 TRPV1Q8NER1 839 aa25.26■■□□□ 1.63
CCDC78-205ENST00000460023 KRT23Q9C075 422 aa25.26■■□□□ 1.63
CCDC78-205ENST00000460023 CNNM2Q9H8M5 875 aa25.26■■□□□ 1.63
CCDC78-205ENST00000460023 CNPY2Q9Y2B0 182 aa25.26■■□□□ 1.63
CCDC78-205ENST00000460023 DNM1LO00429 736 aa25.25■■□□□ 1.63
CCDC78-205ENST00000460023 SLC4A3P48751 1232 aa25.25■■□□□ 1.63
CCDC78-205ENST00000460023 MAMDC4Q6UXC1 1216 aa25.25■■□□□ 1.63
CCDC78-205ENST00000460023 TBC1D10CQ8IV04 446 aa25.25■■□□□ 1.63
CCDC78-205ENST00000460023 ACAD9Q9H845 621 aa25.25■■□□□ 1.63
CCDC78-205ENST00000460023 PRR12Q9ULL5 1215 aa25.25■■□□□ 1.63
CCDC78-205ENST00000460023 SYNGAP1Q96PV0 1343 aa25.25■■□□□ 1.63
CCDC78-205ENST00000460023 CCDC96Q2M329 555 aa25.24■■□□□ 1.63
CCDC78-205ENST00000460023 HABP4Q5JVS0 413 aaKnown RBP25.23■■□□□ 1.63
CCDC78-205ENST00000460023 GPATCH4Q5T3I0 446 aaKnown RBP25.22■■□□□ 1.63
CCDC78-205ENST00000460023 ANKS1AQ92625 1134 aa25.22■■□□□ 1.63
CCDC78-205ENST00000460023 PLXNA1Q9UIW2 1896 aa25.21■■□□□ 1.63
CCDC78-205ENST00000460023 CEP290O15078 2479 aa25.21■■□□□ 1.63
CCDC78-205ENST00000460023 PFASO15067 1338 aa25.21■■□□□ 1.63
CCDC78-205ENST00000460023 ZNF536O15090 1300 aa25.21■■□□□ 1.63
CCDC78-205ENST00000460023 RARBP10826 455 aa25.21■■□□□ 1.63
CCDC78-205ENST00000460023 PDHBP11177 359 aa25.21■■□□□ 1.63
CCDC78-205ENST00000460023 CHMLP26374 656 aa25.21■■□□□ 1.63
CCDC78-205ENST00000460023 PRAMEF19Q5SWL8 479 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms