RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 POLRMTO00411 1230 aaKnown RBP6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 LAD1O00515 517 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 EIF3JO75822 258 aaKnown RBP6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 NTSR2O95665 410 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 MCM3P25205 808 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 BRD2P25440 801 aaKnown RBP6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 GNAQP50148 359 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 GRIN1Q05586 938 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 RBL2Q08999 1139 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 ORC2Q13416 577 aaPredicted RBP6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 NFIXQ14938 502 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 NPY5RQ15761 445 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 SLC10A5Q5PT55 438 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 TTC38Q5R3I4 469 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 IFIT1BQ5T764 474 aaKnown RBP6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 SOGA3Q5TF21 947 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 TOGARAM2Q6ZUX3 1019 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 HDXQ7Z353 690 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 TMC4Q7Z404 712 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 NBPF5PQ86XG9 351 aaPredicted RBP6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 CNBD1Q8NA66 436 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 RETREG2Q8NC44 543 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 DAGLBQ8NCG7 672 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 LRRN4CLQ8ND94 238 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 CCDC12Q8WUD4 166 aaPredicted RBP6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 SYMPKQ92797 1274 aaKnown RBP6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 EXOC4Q96A65 974 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 DHX58Q96C10 678 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 SYT17Q9BSW7 474 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 PARD6BQ9BYG5 372 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 CUEDC2Q9H467 287 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 HAUS4Q9H6D7 363 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 BSDC1Q9NW68 430 aaPredicted RBP6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 NIP7Q9Y221 180 aaKnown RBP eCLIP6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 ZNF330Q9Y3S2 320 aaPredicted RBP6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 CNTNAP5Q8WYK1 1306 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 A0A087X0B3 334 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 H0YIN7 160 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 TEX33O43247 280 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 PRKAB2O43741 272 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 SERPINB2P05120 415 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 SCG2P13521 617 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 CD44P16070 742 aaKnown RBP6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 EEF1GP26641 437 aaKnown RBP6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 ALDH1B1P30837 517 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 KIF5BP33176 963 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 PRPHP41219 470 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 BCAMP50895 628 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 COPB1P53618 953 aaKnown RBP6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 CHMP4BP1P59074 171 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 CDK17Q00537 523 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 CHRNDQ07001 517 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 SLC20A2Q08357 652 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 PAK1Q13153 545 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 PTGDRQ13258 359 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 SMC1AQ14683 1233 aaKnown RBP6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 PFKFB3Q16875 520 aaPredicted RBP6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 LONRF2Q1L5Z9 754 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 COBLL1Q53SF7 1204 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 CAVIN4Q5BKX8 364 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 RRP12Q5JTH9 1297 aaKnown RBP6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 SPECC1Q5M775 1068 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 CC2D2BQ6DHV5 1058 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 WDR93Q6P2C0 686 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 PDXDC2PQ6P474 469 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 RAD9BQ6WBX8 426 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 USP49Q70CQ1 688 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 AMIGO3Q86WK7 504 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 DGKHQ86XP1 1220 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 HELBQ8NG08 1087 aaPredicted RBP6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 CTCFLQ8NI51 663 aaPredicted RBP6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 OXER1Q8TDS5 423 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 RUBCNQ92622 972 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 NAPGQ99747 312 aaPredicted RBP6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 NUP58Q9BVL2 599 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 CCSER1Q9C0I3 900 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 ACBD3Q9H3P7 528 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 THAP9Q9H5L6 903 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 VIPAS39Q9H9C1 493 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 MRPL44Q9H9J2 332 aaKnown RBP6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 INCENPQ9NQS7 918 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 TOMM22Q9NS69 142 aa6.91□□□□□ -1.3
UBQLN4-202ENST00000459954 UBE2Q2LH0YL09 131 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 TULP2O00295 520 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 RPS6KA5O75582 802 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 GYPCP04921 128 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 SMARCA1P28370 1054 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 DNM2P50570 870 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 STIM1Q13586 685 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 KRT31Q15323 416 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 TCP11X2Q5H9J9 407 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 FIGNQ5HY92 759 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 BEND6Q5SZJ8 279 aaPredicted RBP6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 TBC1D9BQ66K14 1250 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 WWC2Q6AWC2 1192 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 CTR9Q6PD62 1173 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 FOXR2Q6PJQ5 311 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 ARHGAP27Q6ZUM4 889 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 FBXO33Q7Z6M2 555 aa6.9□□□□□ -1.3
UBQLN4-202ENST00000459954 CERS3Q8IU89 383 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms