RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ADAMTS5Q9UNA0 930 aa15.01□□□□□ -0.01
COL18A1-206ENST00000459895 RABGAP1Q9Y3P9 1069 aa15.01□□□□□ -0.01
COL18A1-206ENST00000459895 HMGB1P09429 215 aaKnown RBP15□□□□□ -0.01
COL18A1-206ENST00000459895 RXRAP19793 462 aa15□□□□□ -0.01
COL18A1-206ENST00000459895 SNAP25P60880 206 aa15□□□□□ -0.01
COL18A1-206ENST00000459895 TROAPQ12815 778 aa15□□□□□ -0.01
COL18A1-206ENST00000459895 GRM4Q14833 912 aa15□□□□□ -0.01
COL18A1-206ENST00000459895 NFXL1Q6ZNB6 911 aa15□□□□□ -0.01
COL18A1-206ENST00000459895 MB21D1Q8N884 522 aa15□□□□□ -0.01
COL18A1-206ENST00000459895 GPRC5AQ8NFJ5 357 aa15□□□□□ -0.01
COL18A1-206ENST00000459895 PRR12Q9ULL5 1215 aa15□□□□□ -0.01
COL18A1-206ENST00000459895 NID2Q14112 1375 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 CCDC69A6NI79 296 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 PLA2G6O60733 806 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 EIF5BO60841 1220 aaKnown RBP14.99□□□□□ -0.01
COL18A1-206ENST00000459895 PARP1P09874 1014 aaKnown RBP14.99□□□□□ -0.01
COL18A1-206ENST00000459895 LIFRP42702 1097 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 ANAPC15P60006 121 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 PLS1Q14651 629 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 Q3C1V9 767 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 GPATCH4Q5T3I0 446 aaKnown RBP14.99□□□□□ -0.01
COL18A1-206ENST00000459895 SYDE2Q5VT97 1194 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 APOA5Q6Q788 366 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 BTNL9Q6UXG8 535 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 Q6ZUG5 572 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 OTOP1Q7RTM1 612 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 SGMS1Q86VZ5 419 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 MICU3Q86XE3 530 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 STAG2Q8N3U4 1231 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 PRPF38AQ8NAV1 312 aaKnown RBP14.99□□□□□ -0.01
COL18A1-206ENST00000459895 IL17RAQ96F46 866 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 MOV10L1Q9BXT6 1211 aaKnown RBP14.99□□□□□ -0.01
COL18A1-206ENST00000459895 SPATC1LQ9H0A9 340 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 EFCC1Q9HA90 598 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 SLC38A10Q9HBR0 1119 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 ZSWIM6Q9HCJ5 1215 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 HOXC10Q9NYD6 342 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 MAD2L2Q9UI95 211 aa14.99□□□□□ -0.01
COL18A1-206ENST00000459895 TNPO2O14787 897 aaKnown RBP14.98□□□□□ -0.01
COL18A1-206ENST00000459895 PSMA5P28066 241 aa14.98□□□□□ -0.01
COL18A1-206ENST00000459895 PSMC4P43686 418 aa14.98□□□□□ -0.01
COL18A1-206ENST00000459895 FCGRTP55899 365 aa14.98□□□□□ -0.01
COL18A1-206ENST00000459895 KIF22Q14807 665 aa14.98□□□□□ -0.01
COL18A1-206ENST00000459895 SLC35G1Q2M3R5 365 aa14.98□□□□□ -0.01
COL18A1-206ENST00000459895 RUFY3Q7L099 469 aa14.98□□□□□ -0.01
COL18A1-206ENST00000459895 CTU1Q7Z7A3 348 aaKnown RBP14.98□□□□□ -0.01
COL18A1-206ENST00000459895 CATIPQ7Z7H3 387 aa14.98□□□□□ -0.01
COL18A1-206ENST00000459895 NUP133Q8WUM0 1156 aa14.98□□□□□ -0.01
COL18A1-206ENST00000459895 BRF1Q92994 677 aa14.98□□□□□ -0.01
COL18A1-206ENST00000459895 TM6SF1Q9BZW5 370 aa14.98□□□□□ -0.01
COL18A1-206ENST00000459895 RANBP17Q9H2T7 1088 aaKnown RBP14.98□□□□□ -0.01
COL18A1-206ENST00000459895 BRPF3Q9ULD4 1205 aa14.98□□□□□ -0.01
COL18A1-206ENST00000459895 TRIM17Q9Y577 477 aa14.98□□□□□ -0.01
COL18A1-206ENST00000459895 DOCK3Q8IZD9 2030 aa14.98□□□□□ -0.01
COL18A1-206ENST00000459895 ZNF536O15090 1300 aa14.97□□□□□ -0.01
COL18A1-206ENST00000459895 SMCHD1A6NHR9 2005 aa14.97□□□□□ -0.01
COL18A1-206ENST00000459895 FRMPD3Q5JV73 1810 aa14.97□□□□□ -0.01
COL18A1-206ENST00000459895 KLF18A0A0U1RQI7 1052 aa14.97□□□□□ -0.01
COL18A1-206ENST00000459895 GOLGA8BA8MQT2 603 aa14.97□□□□□ -0.01
COL18A1-206ENST00000459895 PRKCZQ05513 592 aa14.97□□□□□ -0.01
COL18A1-206ENST00000459895 APOBRQ0VD83 1088 aa14.97□□□□□ -0.01
COL18A1-206ENST00000459895 TOB2Q14106 344 aaPredicted RBP14.97□□□□□ -0.01
COL18A1-206ENST00000459895 COL13A1Q5TAT6 717 aaPredicted RBP14.97□□□□□ -0.01
COL18A1-206ENST00000459895 SNRNP48Q6IEG0 339 aaKnown RBP14.97□□□□□ -0.01
COL18A1-206ENST00000459895 CCDC174Q6PII3 467 aa14.97□□□□□ -0.01
COL18A1-206ENST00000459895 CCDC144CPQ8IYA2 1237 aa14.97□□□□□ -0.01
COL18A1-206ENST00000459895 CHURC1Q8WUH1 139 aa14.97□□□□□ -0.01
COL18A1-206ENST00000459895 TEX13BQ9BXU2 312 aa14.97□□□□□ -0.01
COL18A1-206ENST00000459895 RAVER2Q9HCJ3 691 aaKnown RBP14.97□□□□□ -0.01
COL18A1-206ENST00000459895 CYP46A1Q9Y6A2 500 aa14.97□□□□□ -0.01
COL18A1-206ENST00000459895 CENPFP49454 3210 aa14.97□□□□□ -0.01
COL18A1-206ENST00000459895 PALM3A6NDB9 673 aaPredicted RBP14.96□□□□□ -0.01
COL18A1-206ENST00000459895 PLEKHA8P1O95397 391 aa14.96□□□□□ -0.01
COL18A1-206ENST00000459895 FMNL1O95466 1100 aaPredicted RBP14.96□□□□□ -0.01
COL18A1-206ENST00000459895 ERCC3P19447 782 aa14.96□□□□□ -0.01
COL18A1-206ENST00000459895 CCNA1P78396 465 aa14.96□□□□□ -0.01
COL18A1-206ENST00000459895 CDC37Q16543 378 aaPredicted RBP14.96□□□□□ -0.01
COL18A1-206ENST00000459895 WDR78Q5VTH9 848 aa14.96□□□□□ -0.01
COL18A1-206ENST00000459895 GPR142Q7Z601 462 aa14.96□□□□□ -0.01
COL18A1-206ENST00000459895 RIOX2Q8IUF8 465 aa14.96□□□□□ -0.01
COL18A1-206ENST00000459895 CPXCR1Q8N123 301 aa14.96□□□□□ -0.01
COL18A1-206ENST00000459895 AGXT2Q9BYV1 514 aa14.96□□□□□ -0.01
COL18A1-206ENST00000459895 UBA5Q9GZZ9 404 aa14.96□□□□□ -0.01
COL18A1-206ENST00000459895 SLC12A7Q9Y666 1083 aa14.96□□□□□ -0.01
COL18A1-206ENST00000459895 CNTNAP5Q8WYK1 1306 aa14.95□□□□□ -0.02
COL18A1-206ENST00000459895 GOLGA8AA7E2F4 631 aa14.95□□□□□ -0.02
COL18A1-206ENST00000459895 KLRF2D3W0D1 207 aa14.95□□□□□ -0.02
COL18A1-206ENST00000459895 ATP2A1O14983 1001 aa14.95□□□□□ -0.02
COL18A1-206ENST00000459895 ZBED4O75132 1171 aa14.95□□□□□ -0.02
COL18A1-206ENST00000459895 MAPK4P31152 587 aa14.95□□□□□ -0.02
COL18A1-206ENST00000459895 OAZ1P54368 228 aa14.95□□□□□ -0.02
COL18A1-206ENST00000459895 FGD1P98174 961 aa14.95□□□□□ -0.02
COL18A1-206ENST00000459895 NBPF11Q86T75 865 aa14.95□□□□□ -0.02
COL18A1-206ENST00000459895 NCAPG2Q86XI2 1143 aa14.95□□□□□ -0.02
COL18A1-206ENST00000459895 ADGRF4Q8IZF3 695 aa14.95□□□□□ -0.02
COL18A1-206ENST00000459895 SHCBP1Q8NEM2 672 aa14.95□□□□□ -0.02
COL18A1-206ENST00000459895 CTCFLQ8NI51 663 aaPredicted RBP14.95□□□□□ -0.02
COL18A1-206ENST00000459895 KIF2CQ99661 725 aa14.95□□□□□ -0.02
COL18A1-206ENST00000459895 C22orf23Q9BZE7 217 aa14.95□□□□□ -0.02
COL18A1-206ENST00000459895 HOMER2Q9NSB8 354 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms