RNA–Protein interactions for RNA: ENST00000459706.1

DDX1-204, Transcript of DEAD-box helicase 1, humanhuman

TSL 3

Gene DDX1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-204ENST00000459706 RUFY4Q6ZNE9 571 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 ACAD11Q709F0 780 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 EEPD1Q7L9B9 569 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 BEND7Q8N7W2 519 aaPredicted RBP7.68□□□□□ -1.18
DDX1-204ENST00000459706 FAM13CQ8NE31 585 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 WHAMMQ8TF30 809 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 SMARCC1Q92922 1105 aaPredicted RBP7.68□□□□□ -1.18
DDX1-204ENST00000459706 RNPC3Q96LT9 517 aaKnown RBP7.68□□□□□ -1.18
DDX1-204ENST00000459706 CCDC74BQ96LY2 380 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 CEP41Q9BYV8 373 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 ST7Q9NRC1 585 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 TJP2Q9UDY2 1190 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 CSADQ9Y600 493 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 CENPJQ9HC77 1338 aaPredicted RBP7.68□□□□□ -1.18
DDX1-204ENST00000459706 FAM135BQ49AJ0 1406 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 ADAMTS13Q76LX8 1427 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 XRN1Q8IZH2 1706 aaKnown RBP7.67□□□□□ -1.18
DDX1-204ENST00000459706 CHD2O14647 1828 aaKnown RBP7.67□□□□□ -1.18
DDX1-204ENST00000459706 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.67□□□□□ -1.18
DDX1-204ENST00000459706 ANKRD62A6NC57 917 aa7.67□□□□□ -1.18
DDX1-204ENST00000459706 IQCA1LA6NCM1 817 aa7.67□□□□□ -1.18
DDX1-204ENST00000459706 CHURC1-FNTBB4DL54 471 aa7.67□□□□□ -1.18
DDX1-204ENST00000459706 GJB6O95452 261 aa7.67□□□□□ -1.18
DDX1-204ENST00000459706 LTKP29376 864 aa7.67□□□□□ -1.18
DDX1-204ENST00000459706 NRG1Q02297 640 aaPredicted RBP7.67□□□□□ -1.18
DDX1-204ENST00000459706 PLEKHG4Q58EX7 1191 aa7.67□□□□□ -1.18
DDX1-204ENST00000459706 TAF7LQ5H9L4 462 aa7.67□□□□□ -1.18
DDX1-204ENST00000459706 FDX2Q6P4F2 183 aa7.67□□□□□ -1.18
DDX1-204ENST00000459706 SYNPOQ8N3V7 929 aa7.67□□□□□ -1.18
DDX1-204ENST00000459706 MFSD2AQ8NA29 543 aa7.67□□□□□ -1.18
DDX1-204ENST00000459706 C12orf50Q8NA57 414 aaPredicted RBP7.67□□□□□ -1.18
DDX1-204ENST00000459706 NACC1Q96RE7 527 aa7.67□□□□□ -1.18
DDX1-204ENST00000459706 SLC9A7Q96T83 725 aa7.67□□□□□ -1.18
DDX1-204ENST00000459706 DNAJC7Q99615 494 aa7.67□□□□□ -1.18
DDX1-204ENST00000459706 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.67□□□□□ -1.18
DDX1-204ENST00000459706 PIDD1Q9HB75 910 aa7.67□□□□□ -1.18
DDX1-204ENST00000459706 PCOLCE2Q9UKZ9 415 aa7.67□□□□□ -1.18
DDX1-204ENST00000459706 ZNF214Q9UL59 606 aaPredicted RBP7.67□□□□□ -1.18
DDX1-204ENST00000459706 MRPL42Q9Y6G3 142 aaKnown RBP7.67□□□□□ -1.18
DDX1-204ENST00000459706 ABCC11Q96J66 1382 aa7.67□□□□□ -1.18
DDX1-204ENST00000459706 CCDC7Q96M83 1385 aa7.67□□□□□ -1.18
DDX1-204ENST00000459706 NPHP4O75161 1426 aaPredicted RBP7.67□□□□□ -1.18
DDX1-204ENST00000459706 PTCH1Q13635 1447 aa7.67□□□□□ -1.18
DDX1-204ENST00000459706 LMTK3Q96Q04 1460 aa7.67□□□□□ -1.18
DDX1-204ENST00000459706 CST3P01034 146 aaPredicted RBP7.66□□□□□ -1.18
DDX1-204ENST00000459706 ACRP10323 421 aa7.66□□□□□ -1.18
DDX1-204ENST00000459706 NTF4P34130 210 aa7.66□□□□□ -1.18
DDX1-204ENST00000459706 SLC7A5Q01650 507 aa7.66□□□□□ -1.18
DDX1-204ENST00000459706 MTERF2Q49AM1 385 aa7.66□□□□□ -1.18
DDX1-204ENST00000459706 TMEM132EQ6IEE7 984 aa7.66□□□□□ -1.18
DDX1-204ENST00000459706 VHLLQ6RSH7 139 aa7.66□□□□□ -1.18
DDX1-204ENST00000459706 PODNQ7Z5L7 613 aa7.66□□□□□ -1.18
DDX1-204ENST00000459706 ALYREFQ86V81 257 aaKnown RBP7.66□□□□□ -1.18
DDX1-204ENST00000459706 THAP3Q8WTV1 239 aaPredicted RBP7.66□□□□□ -1.18
DDX1-204ENST00000459706 LENG1Q96BZ8 264 aaPredicted RBP7.66□□□□□ -1.18
DDX1-204ENST00000459706 KLHL3Q9UH77 587 aa7.66□□□□□ -1.18
DDX1-204ENST00000459706 CCDC163A0A0D9SF12 145 aa7.65□□□□□ -1.18
DDX1-204ENST00000459706 C9orf172C9J069 976 aa7.65□□□□□ -1.18
DDX1-204ENST00000459706 ADGRB2O60241 1585 aa7.65□□□□□ -1.18
DDX1-204ENST00000459706 SPATA31C1P0DKV0 1188 aa7.65□□□□□ -1.18
DDX1-204ENST00000459706 ASPAP45381 313 aa7.65□□□□□ -1.18
DDX1-204ENST00000459706 PMS1P54277 932 aaKnown RBP7.65□□□□□ -1.18
DDX1-204ENST00000459706 NWD1Q149M9 1564 aa7.65□□□□□ -1.18
DDX1-204ENST00000459706 WASHC2AQ641Q2 1341 aa7.65□□□□□ -1.18
DDX1-204ENST00000459706 C6orf15Q6UXA7 325 aaPredicted RBP7.65□□□□□ -1.18
DDX1-204ENST00000459706 DYMQ7RTS9 669 aa7.65□□□□□ -1.18
DDX1-204ENST00000459706 HOMER1Q86YM7 354 aa7.65□□□□□ -1.18
DDX1-204ENST00000459706 APPBP2Q92624 585 aa7.65□□□□□ -1.18
DDX1-204ENST00000459706 SGSM3Q96HU1 749 aa7.65□□□□□ -1.18
DDX1-204ENST00000459706 TESK2Q96S53 571 aa7.65□□□□□ -1.18
DDX1-204ENST00000459706 YIPF2Q9BWQ6 316 aa7.65□□□□□ -1.18
DDX1-204ENST00000459706 AP4E1Q9UPM8 1137 aa7.65□□□□□ -1.18
DDX1-204ENST00000459706 METP08581 1390 aa7.64□□□□□ -1.19
DDX1-204ENST00000459706 KIF7Q2M1P5 1343 aa7.64□□□□□ -1.19
DDX1-204ENST00000459706 EVC2Q86UK5 1308 aa7.64□□□□□ -1.19
DDX1-204ENST00000459706 LTBP3Q9NS15 1303 aa7.64□□□□□ -1.19
DDX1-204ENST00000459706 CCDC85CA6NKD9 419 aa7.64□□□□□ -1.19
DDX1-204ENST00000459706 F8W735 103 aaPredicted RBP7.64□□□□□ -1.19
DDX1-204ENST00000459706 DNAJA2O60884 412 aa7.64□□□□□ -1.19
DDX1-204ENST00000459706 LRIG2O94898 1065 aa7.64□□□□□ -1.19
DDX1-204ENST00000459706 WISP1O95388 367 aa7.64□□□□□ -1.19
DDX1-204ENST00000459706 GBP1P32455 592 aa7.64□□□□□ -1.19
DDX1-204ENST00000459706 TTLL4Q14679 1199 aa7.64□□□□□ -1.19
DDX1-204ENST00000459706 TCEAL1Q15170 157 aa7.64□□□□□ -1.19
DDX1-204ENST00000459706 SMYD4Q8IYR2 804 aaPredicted RBP7.64□□□□□ -1.19
DDX1-204ENST00000459706 PHACTR4Q8IZ21 702 aa7.64□□□□□ -1.19
DDX1-204ENST00000459706 LRRC47Q8N1G4 583 aaKnown RBP7.64□□□□□ -1.19
DDX1-204ENST00000459706 SH3TC2Q8TF17 1288 aa7.64□□□□□ -1.19
DDX1-204ENST00000459706 CYB5D2Q8WUJ1 264 aa7.64□□□□□ -1.19
DDX1-204ENST00000459706 FOXQ1Q9C009 403 aa7.64□□□□□ -1.19
DDX1-204ENST00000459706 POGKQ9P215 609 aa7.64□□□□□ -1.19
DDX1-204ENST00000459706 NKTRP30414 1462 aaKnown RBP7.63□□□□□ -1.19
DDX1-204ENST00000459706 NINLQ9Y2I6 1382 aa7.63□□□□□ -1.19
DDX1-204ENST00000459706 WIPF1O43516 503 aa7.63□□□□□ -1.19
DDX1-204ENST00000459706 SNRPNP63162 240 aaKnown RBP7.63□□□□□ -1.19
DDX1-204ENST00000459706 SLBPQ14493 270 aaKnown RBP eCLIP7.63□□□□□ -1.19
DDX1-204ENST00000459706 UVSSAQ2YD98 709 aa7.63□□□□□ -1.19
DDX1-204ENST00000459706 GNPTABQ3T906 1256 aa7.63□□□□□ -1.19
DDX1-204ENST00000459706 ANKRD39Q53RE8 183 aa7.63□□□□□ -1.19
DDX1-204ENST00000459706 C2orf27AQ580R0 203 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms