RNA–Protein interactions for RNA: ENST00000458642.5

HDAC11-216, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-216ENST00000458642 NRBP1Q9UHY1 535 aa22.22■■□□□ 1.15
HDAC11-216ENST00000458642 DIS3Q9Y2L1 958 aaKnown RBP22.22■■□□□ 1.15
HDAC11-216ENST00000458642 ROBO3Q96MS0 1386 aa22.22■■□□□ 1.15
HDAC11-216ENST00000458642 M0R2C6 588 aa22.21■■□□□ 1.15
HDAC11-216ENST00000458642 PQBP1O60828 265 aaKnown RBP22.21■■□□□ 1.15
HDAC11-216ENST00000458642 KBTBD3Q8NAB2 608 aa22.21■■□□□ 1.15
HDAC11-216ENST00000458642 CDX2Q99626 313 aaPredicted RBP22.21■■□□□ 1.15
HDAC11-216ENST00000458642 TTYH1Q9H313 450 aaPredicted RBP22.21■■□□□ 1.15
HDAC11-216ENST00000458642 MKNK2Q9HBH9 465 aa22.21■■□□□ 1.15
HDAC11-216ENST00000458642 MYH4Q9Y623 1939 aa22.21■■□□□ 1.15
HDAC11-216ENST00000458642 SPTBN5Q9NRC6 3674 aaKnown RBP22.21■■□□□ 1.15
HDAC11-216ENST00000458642 IGKV6D-41A0A0C4DH26 115 aa22.2■■□□□ 1.14
HDAC11-216ENST00000458642 MYADML2A6NDP7 307 aa22.2■■□□□ 1.14
HDAC11-216ENST00000458642 SNAI1O95863 264 aaPredicted RBP22.2■■□□□ 1.14
HDAC11-216ENST00000458642 AKR1A1P14550 325 aa22.2■■□□□ 1.14
HDAC11-216ENST00000458642 RNF180Q86T96 592 aa22.2■■□□□ 1.14
HDAC11-216ENST00000458642 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.2■■□□□ 1.14
HDAC11-216ENST00000458642 CPXCR1Q8N123 301 aa22.2■■□□□ 1.14
HDAC11-216ENST00000458642 COL25A1Q9BXS0 654 aaPredicted RBP22.2■■□□□ 1.14
HDAC11-216ENST00000458642 TEX13BQ9BXU2 312 aa22.2■■□□□ 1.14
HDAC11-216ENST00000458642 NYAP2Q9P242 653 aa22.2■■□□□ 1.14
HDAC11-216ENST00000458642 CLIP2Q9UDT6 1046 aa22.2■■□□□ 1.14
HDAC11-216ENST00000458642 SYNRGQ9UMZ2 1314 aa22.2■■□□□ 1.14
HDAC11-216ENST00000458642 ADCY6O43306 1168 aa22.19■■□□□ 1.14
HDAC11-216ENST00000458642 CLTBP09497 229 aa22.19■■□□□ 1.14
HDAC11-216ENST00000458642 APPBP2Q92624 585 aa22.19■■□□□ 1.14
HDAC11-216ENST00000458642 SEMA6BQ9H3T3 888 aa22.19■■□□□ 1.14
HDAC11-216ENST00000458642 RAVER2Q9HCJ3 691 aaKnown RBP22.19■■□□□ 1.14
HDAC11-216ENST00000458642 DNAJC25-GNG10A0A024R161 153 aa22.18■■□□□ 1.14
HDAC11-216ENST00000458642 RNF113AO15541 343 aaKnown RBP22.18■■□□□ 1.14
HDAC11-216ENST00000458642 GPAA1O43292 621 aa22.18■■□□□ 1.14
HDAC11-216ENST00000458642 LRRC47Q8N1G4 583 aaKnown RBP22.18■■□□□ 1.14
HDAC11-216ENST00000458642 KIFC2Q96AC6 838 aa22.18■■□□□ 1.14
HDAC11-216ENST00000458642 CEP95Q96GE4 821 aa22.18■■□□□ 1.14
HDAC11-216ENST00000458642 FGD4Q96M96 766 aa22.18■■□□□ 1.14
HDAC11-216ENST00000458642 CHMP4BQ9H444 224 aaKnown RBP22.18■■□□□ 1.14
HDAC11-216ENST00000458642 ZHX1Q9UKY1 873 aaPredicted RBP22.18■■□□□ 1.14
HDAC11-216ENST00000458642 CNPY2Q9Y2B0 182 aa22.18■■□□□ 1.14
HDAC11-216ENST00000458642 TACC3Q9Y6A5 838 aa22.18■■□□□ 1.14
HDAC11-216ENST00000458642 ACLYP53396 1101 aa22.17■■□□□ 1.14
HDAC11-216ENST00000458642 MYLIPQ8WY64 445 aa22.17■■□□□ 1.14
HDAC11-216ENST00000458642 CHMP4CQ96CF2 233 aa22.17■■□□□ 1.14
HDAC11-216ENST00000458642 SEC62Q99442 399 aaKnown RBP22.17■■□□□ 1.14
HDAC11-216ENST00000458642 MCM3APO60318 1980 aa22.17■■□□□ 1.14
HDAC11-216ENST00000458642 KIAA0355O15063 1070 aa22.16■■□□□ 1.14
HDAC11-216ENST00000458642 COPB2P35606 906 aa22.16■■□□□ 1.14
HDAC11-216ENST00000458642 TDO2P48775 406 aa22.16■■□□□ 1.14
HDAC11-216ENST00000458642 FAAP100Q0VG06 881 aa22.16■■□□□ 1.14
HDAC11-216ENST00000458642 GIMAP6Q6P9H5 292 aa22.16■■□□□ 1.14
HDAC11-216ENST00000458642 PRPF38AQ8NAV1 312 aaKnown RBP22.16■■□□□ 1.14
HDAC11-216ENST00000458642 KLHDC9Q8NEP7 349 aa22.16■■□□□ 1.14
HDAC11-216ENST00000458642 DDX11Q96FC9 970 aa22.16■■□□□ 1.14
HDAC11-216ENST00000458642 SYNGAP1Q96PV0 1343 aa22.15■■□□□ 1.14
HDAC11-216ENST00000458642 RAG1P15918 1043 aa22.15■■□□□ 1.14
HDAC11-216ENST00000458642 SMAD3P84022 425 aaKnown RBP22.15■■□□□ 1.14
HDAC11-216ENST00000458642 KCNA10Q16322 511 aa22.15■■□□□ 1.14
HDAC11-216ENST00000458642 CCSAPQ6IQ19 270 aaPredicted RBP22.15■■□□□ 1.14
HDAC11-216ENST00000458642 MAMDC4Q6UXC1 1216 aa22.15■■□□□ 1.14
HDAC11-216ENST00000458642 RNPC3Q96LT9 517 aaKnown RBP22.15■■□□□ 1.14
HDAC11-216ENST00000458642 DCTPP1Q9H773 170 aa22.15■■□□□ 1.14
HDAC11-216ENST00000458642 SLC38A10Q9HBR0 1119 aa22.15■■□□□ 1.14
HDAC11-216ENST00000458642 STARD7Q9NQZ5 370 aa22.15■■□□□ 1.14
HDAC11-216ENST00000458642 TMEM39AQ9NV64 488 aa22.15■■□□□ 1.14
HDAC11-216ENST00000458642 APPP05067 770 aa22.14■■□□□ 1.13
HDAC11-216ENST00000458642 OTUD7AQ8TE49 926 aaPredicted RBP22.14■■□□□ 1.13
HDAC11-216ENST00000458642 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.14■■□□□ 1.13
HDAC11-216ENST00000458642 MTMR4Q9NYA4 1195 aa22.14■■□□□ 1.13
HDAC11-216ENST00000458642 FAM184BQ9ULE4 1060 aa22.14■■□□□ 1.13
HDAC11-216ENST00000458642 ATP2A1O14983 1001 aa22.13■■□□□ 1.13
HDAC11-216ENST00000458642 ZBED4O75132 1171 aa22.13■■□□□ 1.13
HDAC11-216ENST00000458642 ANKRD33Q7Z3H0 272 aa22.13■■□□□ 1.13
HDAC11-216ENST00000458642 IFNL3Q8IZI9 196 aa22.13■■□□□ 1.13
HDAC11-216ENST00000458642 ZNF444Q8N0Y2 327 aaPredicted RBP22.13■■□□□ 1.13
HDAC11-216ENST00000458642 MSL3Q8N5Y2 521 aaKnown RBP22.13■■□□□ 1.13
HDAC11-216ENST00000458642 MAFAQ8NHW3 353 aaPredicted RBP22.13■■□□□ 1.13
HDAC11-216ENST00000458642 MKL1Q969V6 931 aa22.13■■□□□ 1.13
HDAC11-216ENST00000458642 TSEN34Q9BSV6 310 aaKnown RBP22.13■■□□□ 1.13
HDAC11-216ENST00000458642 HOMER2Q9NSB8 354 aa22.13■■□□□ 1.13
HDAC11-216ENST00000458642 DDX49Q9Y6V7 483 aaKnown RBP22.13■■□□□ 1.13
HDAC11-216ENST00000458642 FPGSQ05932 587 aa22.12■■□□□ 1.13
HDAC11-216ENST00000458642 ACVR2BQ13705 512 aa22.12■■□□□ 1.13
HDAC11-216ENST00000458642 RASGRP2Q7LDG7 609 aa22.12■■□□□ 1.13
HDAC11-216ENST00000458642 ANKRD35Q8N283 1001 aa22.12■■□□□ 1.13
HDAC11-216ENST00000458642 DUSP11O75319 330 aaKnown RBP22.11■■□□□ 1.13
HDAC11-216ENST00000458642 C6orf222P0C671 652 aaPredicted RBP22.11■■□□□ 1.13
HDAC11-216ENST00000458642 PTGS1P23219 599 aa22.11■■□□□ 1.13
HDAC11-216ENST00000458642 CNTN2Q02246 1040 aa22.11■■□□□ 1.13
HDAC11-216ENST00000458642 CCDC144BQ3MJ40 725 aa22.11■■□□□ 1.13
HDAC11-216ENST00000458642 SLFN13Q68D06 897 aa22.11■■□□□ 1.13
HDAC11-216ENST00000458642 GPATCH3Q96I76 525 aa22.11■■□□□ 1.13
HDAC11-216ENST00000458642 KATNBL1Q9H079 304 aa22.11■■□□□ 1.13
HDAC11-216ENST00000458642 FEM1BQ9UK73 627 aa22.11■■□□□ 1.13
HDAC11-216ENST00000458642 CTDP1Q9Y5B0 961 aaPredicted RBP22.11■■□□□ 1.13
HDAC11-216ENST00000458642 PATL2C9JE40 543 aaKnown RBP22.1■■□□□ 1.13
HDAC11-216ENST00000458642 TTLL1O95922 423 aa22.1■■□□□ 1.13
HDAC11-216ENST00000458642 ASGR1P07306 291 aa22.1■■□□□ 1.13
HDAC11-216ENST00000458642 ZFYP08048 801 aaPredicted RBP22.1■■□□□ 1.13
HDAC11-216ENST00000458642 ARMCX2Q7L311 632 aa22.1■■□□□ 1.13
HDAC11-216ENST00000458642 ZNF467Q7Z7K2 595 aaPredicted RBP22.1■■□□□ 1.13
HDAC11-216ENST00000458642 CCDC144CPQ8IYA2 1237 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms