RNA–Protein interactions for RNA: ENST00000458283.5

PCCA-208, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-208ENST00000458283 SH2D4AQ9H788 454 aa11.95□□□□□ -0.5
PCCA-208ENST00000458283 GOPCQ9HD26 462 aa11.95□□□□□ -0.5
PCCA-208ENST00000458283 NID2Q14112 1375 aa11.94□□□□□ -0.5
PCCA-208ENST00000458283 CNTNAP5Q8WYK1 1306 aa11.94□□□□□ -0.5
PCCA-208ENST00000458283 hCG_1642624A0A1W2PR95 340 aa11.94□□□□□ -0.5
PCCA-208ENST00000458283 CTDNEP1O95476 244 aa11.94□□□□□ -0.5
PCCA-208ENST00000458283 GJB2P29033 226 aa11.94□□□□□ -0.5
PCCA-208ENST00000458283 KIF5BP33176 963 aa11.94□□□□□ -0.5
PCCA-208ENST00000458283 SPP2Q13103 211 aa11.94□□□□□ -0.5
PCCA-208ENST00000458283 KIAA1755Q5JYT7 1200 aa11.94□□□□□ -0.5
PCCA-208ENST00000458283 FAM83BQ5T0W9 1011 aa11.94□□□□□ -0.5
PCCA-208ENST00000458283 CPLX2Q6PUV4 134 aaKnown RBP11.94□□□□□ -0.5
PCCA-208ENST00000458283 TMTC3Q6ZXV5 915 aa11.94□□□□□ -0.5
PCCA-208ENST00000458283 STAG2Q8N3U4 1231 aa11.94□□□□□ -0.5
PCCA-208ENST00000458283 FANCBQ8NB91 859 aa11.94□□□□□ -0.5
PCCA-208ENST00000458283 NSUN7Q8NE18 718 aaKnown RBP11.94□□□□□ -0.5
PCCA-208ENST00000458283 CD99L2Q8TCZ2 262 aa11.94□□□□□ -0.5
PCCA-208ENST00000458283 OPTNQ96CV9 577 aa11.94□□□□□ -0.5
PCCA-208ENST00000458283 SLC26A6Q9BXS9 759 aa11.94□□□□□ -0.5
PCCA-208ENST00000458283 AS3MTQ9HBK9 375 aa11.94□□□□□ -0.5
PCCA-208ENST00000458283 FAM217BQ9NTX9 383 aaPredicted RBP11.94□□□□□ -0.5
PCCA-208ENST00000458283 RBM28Q9NW13 759 aaKnown RBP11.94□□□□□ -0.5
PCCA-208ENST00000458283 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.94□□□□□ -0.5
PCCA-208ENST00000458283 ZHX2Q9Y6X8 837 aa11.94□□□□□ -0.5
PCCA-208ENST00000458283 PHIPQ8WWQ0 1821 aa11.94□□□□□ -0.5
PCCA-208ENST00000458283 GJA5P36382 358 aa11.93□□□□□ -0.5
PCCA-208ENST00000458283 SLC1A4P43007 532 aa11.93□□□□□ -0.5
PCCA-208ENST00000458283 NOVP48745 357 aa11.93□□□□□ -0.5
PCCA-208ENST00000458283 RCAN1P53805 252 aa11.93□□□□□ -0.5
PCCA-208ENST00000458283 HMGCS2P54868 508 aa11.93□□□□□ -0.5
PCCA-208ENST00000458283 TTBK2Q6IQ55 1244 aa11.93□□□□□ -0.5
PCCA-208ENST00000458283 DCAF4Q8WV16 495 aa11.93□□□□□ -0.5
PCCA-208ENST00000458283 UBA5Q9GZZ9 404 aa11.93□□□□□ -0.5
PCCA-208ENST00000458283 VCPKMTQ9H867 229 aa11.93□□□□□ -0.5
PCCA-208ENST00000458283 EFCC1Q9HA90 598 aa11.93□□□□□ -0.5
PCCA-208ENST00000458283 GINM1Q9NU53 330 aa11.93□□□□□ -0.5
PCCA-208ENST00000458283 MAD2L2Q9UI95 211 aa11.93□□□□□ -0.5
PCCA-208ENST00000458283 TMX2Q9Y320 296 aa11.93□□□□□ -0.5
PCCA-208ENST00000458283 CCDC196A0A1B0GTZ2 297 aa11.92□□□□□ -0.5
PCCA-208ENST00000458283 F5H6K3 240 aa11.92□□□□□ -0.5
PCCA-208ENST00000458283 CDKL5O76039 1030 aa11.92□□□□□ -0.5
PCCA-208ENST00000458283 SLC16A2P36021 539 aa11.92□□□□□ -0.5
PCCA-208ENST00000458283 SP3Q02447 781 aa11.92□□□□□ -0.5
PCCA-208ENST00000458283 KLRC3Q07444 240 aa11.92□□□□□ -0.5
PCCA-208ENST00000458283 ZNF543Q08ER8 600 aa11.92□□□□□ -0.5
PCCA-208ENST00000458283 ASPRV1Q53RT3 343 aa11.92□□□□□ -0.5
PCCA-208ENST00000458283 FOXD4L5Q5VV16 416 aaPredicted RBP11.92□□□□□ -0.5
PCCA-208ENST00000458283 GADL1Q6ZQY3 521 aa11.92□□□□□ -0.5
PCCA-208ENST00000458283 NBPF11Q86T75 865 aa11.92□□□□□ -0.5
PCCA-208ENST00000458283 HOMER1Q86YM7 354 aa11.92□□□□□ -0.5
PCCA-208ENST00000458283 SRBD1Q8N5C6 995 aaKnown RBP11.92□□□□□ -0.5
PCCA-208ENST00000458283 FAM184AQ8NB25 1140 aa11.92□□□□□ -0.5
PCCA-208ENST00000458283 ZNF280CQ8ND82 737 aa11.92□□□□□ -0.5
PCCA-208ENST00000458283 GMCL1P1Q8NEA9 526 aa11.92□□□□□ -0.5
PCCA-208ENST00000458283 FOXD4L4Q8WXT5 416 aaPredicted RBP11.92□□□□□ -0.5
PCCA-208ENST00000458283 TANGO6Q9C0B7 1094 aa11.92□□□□□ -0.5
PCCA-208ENST00000458283 VAT1LQ9HCJ6 419 aa11.92□□□□□ -0.5
PCCA-208ENST00000458283 ORC3Q9UBD5 711 aaPredicted RBP11.92□□□□□ -0.5
PCCA-208ENST00000458283 CEP290O15078 2479 aa11.92□□□□□ -0.5
PCCA-208ENST00000458283 CCL15-CCL14A0A0B4J2E2 113 aa11.91□□□□□ -0.5
PCCA-208ENST00000458283 SPDYE5A6NIY4 337 aa11.91□□□□□ -0.5
PCCA-208ENST00000458283 USP17L10C9JJH3 530 aa11.91□□□□□ -0.5
PCCA-208ENST00000458283 KLRF2D3W0D1 207 aa11.91□□□□□ -0.5
PCCA-208ENST00000458283 BMP3P12645 472 aa11.91□□□□□ -0.5
PCCA-208ENST00000458283 GTF2A2P52657 109 aa11.91□□□□□ -0.5
PCCA-208ENST00000458283 SNAP25P60880 206 aa11.91□□□□□ -0.5
PCCA-208ENST00000458283 AKAP17AQ02040 695 aaKnown RBP11.91□□□□□ -0.5
PCCA-208ENST00000458283 SSRP1Q08945 709 aaKnown RBP11.91□□□□□ -0.5
PCCA-208ENST00000458283 TAF1CQ15572 869 aaPredicted RBP11.91□□□□□ -0.5
PCCA-208ENST00000458283 CCL15Q16663 113 aa11.91□□□□□ -0.5
PCCA-208ENST00000458283 SLC35G1Q2M3R5 365 aa11.91□□□□□ -0.5
PCCA-208ENST00000458283 ERO1BQ86YB8 467 aa11.91□□□□□ -0.5
PCCA-208ENST00000458283 TRIM22Q8IYM9 498 aa11.91□□□□□ -0.5
PCCA-208ENST00000458283 MKL1Q969V6 931 aa11.91□□□□□ -0.5
PCCA-208ENST00000458283 INTS4Q96HW7 963 aaKnown RBP11.91□□□□□ -0.5
PCCA-208ENST00000458283 AIFM3Q96NN9 605 aa11.91□□□□□ -0.5
PCCA-208ENST00000458283 KIAA1683Q9H0B3 1180 aa11.91□□□□□ -0.5
PCCA-208ENST00000458283 PTPN22Q9Y2R2 807 aa11.91□□□□□ -0.5
PCCA-208ENST00000458283 MYH6P13533 1939 aa11.9□□□□□ -0.5
PCCA-208ENST00000458283 POTEFA5A3E0 1075 aa11.9□□□□□ -0.5
PCCA-208ENST00000458283 VPS37CA5D8V6 355 aaPredicted RBP11.9□□□□□ -0.5
PCCA-208ENST00000458283 PALM3A6NDB9 673 aaPredicted RBP11.9□□□□□ -0.5
PCCA-208ENST00000458283 TMEM232C9JQI7 657 aa11.9□□□□□ -0.5
PCCA-208ENST00000458283 FMNL1O95466 1100 aaPredicted RBP11.9□□□□□ -0.5
PCCA-208ENST00000458283 SNHG28P0DPA3 235 aa11.9□□□□□ -0.5
PCCA-208ENST00000458283 VCAM1P19320 739 aa11.9□□□□□ -0.5
PCCA-208ENST00000458283 GUCY1B3Q02153 619 aa11.9□□□□□ -0.5
PCCA-208ENST00000458283 ARHGEF6Q15052 776 aa11.9□□□□□ -0.5
PCCA-208ENST00000458283 NTRK3Q16288 839 aa11.9□□□□□ -0.5
PCCA-208ENST00000458283 SMARCC2Q8TAQ2 1214 aa11.9□□□□□ -0.5
PCCA-208ENST00000458283 GPKOWQ92917 476 aaPredicted RBP eCLIP11.9□□□□□ -0.5
PCCA-208ENST00000458283 GMCL1Q96IK5 515 aa11.9□□□□□ -0.5
PCCA-208ENST00000458283 PTPN18Q99952 460 aa11.9□□□□□ -0.5
PCCA-208ENST00000458283 LLPHQ9BRT6 129 aaKnown RBP11.9□□□□□ -0.5
PCCA-208ENST00000458283 WDR18Q9BV38 432 aa11.9□□□□□ -0.5
PCCA-208ENST00000458283 ZFYVE28Q9HCC9 887 aa11.9□□□□□ -0.5
PCCA-208ENST00000458283 EMILIN3Q9NT22 766 aa11.9□□□□□ -0.5
PCCA-208ENST00000458283 TMOD4Q9NZQ9 345 aa11.9□□□□□ -0.5
PCCA-208ENST00000458283 PTPRFP10586 1907 aa11.9□□□□□ -0.51
PCCA-208ENST00000458283 LOC285556D6RIA3 1793 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms