RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 SLC30A9Q6PML9 568 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 LRRC31Q6UY01 552 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.35□□□□□ -1.39
HMGB4-202ENST00000458277 ARHGAP22Q7Z5H3 698 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 CACTIN-AS1Q8N1I8 211 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 GAS2L2Q8NHY3 880 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 SHKBP1Q8TBC3 707 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 TRPM4Q8TD43 1214 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 EZH1Q92800 747 aaPredicted RBP6.35□□□□□ -1.39
HMGB4-202ENST00000458277 MRFAP1L1Q96HT8 127 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 CCDC114Q96M63 670 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 RUFY1Q96T51 708 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 NAP1L3Q99457 506 aaPredicted RBP6.35□□□□□ -1.39
HMGB4-202ENST00000458277 NAT10Q9H0A0 1025 aaKnown RBP6.35□□□□□ -1.39
HMGB4-202ENST00000458277 KCNF1Q9H3M0 494 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 RABEP2Q9H5N1 569 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 VIPAS39Q9H9C1 493 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 ZFATQ9P243 1243 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 DNAI1Q9UI46 699 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 FAN1Q9Y2M0 1017 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 ATP8A1Q9Y2Q0 1164 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 THRAP3Q9Y2W1 955 aaKnown RBP6.35□□□□□ -1.39
HMGB4-202ENST00000458277 SYNMO15061 1565 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 ATP10BO94823 1461 aa6.34□□□□□ -1.39
HMGB4-202ENST00000458277 ZNF644Q9H582 1327 aaPredicted RBP6.34□□□□□ -1.39
HMGB4-202ENST00000458277 ENO4A6NNW6 628 aa6.34□□□□□ -1.39
HMGB4-202ENST00000458277 KRTAP9-7A8MTY7 169 aa6.34□□□□□ -1.39
HMGB4-202ENST00000458277 PIK3CDO00329 1044 aa6.34□□□□□ -1.39
HMGB4-202ENST00000458277 SKILP12757 684 aa6.34□□□□□ -1.39
HMGB4-202ENST00000458277 HOXA10P31260 410 aaPredicted RBP6.34□□□□□ -1.39
HMGB4-202ENST00000458277 NEXNQ0ZGT2 675 aa6.34□□□□□ -1.39
HMGB4-202ENST00000458277 PRPF4BQ13523 1007 aaKnown RBP6.34□□□□□ -1.39
HMGB4-202ENST00000458277 ZNF124Q15973 351 aa6.34□□□□□ -1.39
HMGB4-202ENST00000458277 KIAA0753Q2KHM9 967 aa6.34□□□□□ -1.39
HMGB4-202ENST00000458277 CEP85LQ5SZL2 805 aa6.34□□□□□ -1.39
HMGB4-202ENST00000458277 ZNF648Q5T619 568 aaPredicted RBP6.34□□□□□ -1.39
HMGB4-202ENST00000458277 ZKSCAN2Q63HK3 967 aa6.34□□□□□ -1.39
HMGB4-202ENST00000458277 SPOCD1Q6ZMY3 1216 aa6.34□□□□□ -1.39
HMGB4-202ENST00000458277 ALDH16A1Q8IZ83 802 aa6.34□□□□□ -1.39
HMGB4-202ENST00000458277 IL22RA1Q8N6P7 574 aa6.34□□□□□ -1.39
HMGB4-202ENST00000458277 P3H4Q92791 437 aa6.34□□□□□ -1.39
HMGB4-202ENST00000458277 KCNB2Q92953 911 aa6.34□□□□□ -1.39
HMGB4-202ENST00000458277 ZKSCAN4Q969J2 545 aaPredicted RBP6.34□□□□□ -1.39
HMGB4-202ENST00000458277 ACTR5Q9H9F9 607 aaPredicted RBP6.34□□□□□ -1.39
HMGB4-202ENST00000458277 TMOD4Q9NZQ9 345 aa6.34□□□□□ -1.39
HMGB4-202ENST00000458277 GMEB1Q9Y692 573 aa6.34□□□□□ -1.39
HMGB4-202ENST00000458277 GOLGA6L4A6NEF3 574 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 TMEM232C9JQI7 657 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 MAP2K7O14733 419 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 CDC45O75419 566 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 MAP3K6O95382 1288 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 BRD1O95696 1058 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 TBC1D8O95759 1140 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 FAM200BP0CF97 657 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 DESP17661 470 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 PTGS1P23219 599 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 TARSP26639 723 aaKnown RBP6.33□□□□□ -1.4
HMGB4-202ENST00000458277 CCNHP51946 323 aaPredicted RBP6.33□□□□□ -1.4
HMGB4-202ENST00000458277 NLRP5P59047 1200 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 APOBRQ0VD83 1088 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 NAA25Q14CX7 972 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 POSTNQ15063 836 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 SNCBQ16143 134 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 ERCC6LQ2NKX8 1250 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 TSNAXIP1Q2TAA8 658 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 CDCA2Q69YH5 1023 aaPredicted RBP6.33□□□□□ -1.4
HMGB4-202ENST00000458277 CAPRIN2Q6IMN6 1127 aaKnown RBP6.33□□□□□ -1.4
HMGB4-202ENST00000458277 SARM1Q6SZW1 724 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 ANKRD13BQ86YJ7 626 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 IQCF2Q8IXL9 164 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 C17orf53Q8N3J3 647 aaPredicted RBP6.33□□□□□ -1.4
HMGB4-202ENST00000458277 TEX9Q8N6V9 391 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 CCDC150Q8NCX0 1101 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 TRIM58Q8NG06 486 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 OR8K1Q8NGG5 319 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 ANKRD24Q8TF21 1146 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 THOC1Q96FV9 657 aaKnown RBP6.33□□□□□ -1.4
HMGB4-202ENST00000458277 NGLY1Q96IV0 654 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 MPHOSPH8Q99549 860 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 ARPC5LQ9BPX5 153 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 CEP41Q9BYV8 373 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 JADE2Q9NQC1 790 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 ST7Q9NRC1 585 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 VPS18Q9P253 973 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.33□□□□□ -1.4
HMGB4-202ENST00000458277 CORO1CQ9ULV4 474 aaPredicted RBP6.33□□□□□ -1.4
HMGB4-202ENST00000458277 CDK13Q14004 1512 aaKnown RBP6.33□□□□□ -1.4
HMGB4-202ENST00000458277 FGD6Q6ZV73 1430 aa6.33□□□□□ -1.4
HMGB4-202ENST00000458277 KIF14Q15058 1648 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 MAGI3Q5TCQ9 1506 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 SRRM3A6NNA2 597 aaPredicted RBP6.32□□□□□ -1.4
HMGB4-202ENST00000458277 CREB3O43889 395 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 HMMRO75330 724 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 HCLS1P14317 486 aaPredicted RBP6.32□□□□□ -1.4
HMGB4-202ENST00000458277 PAX3P23760 479 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 USP5P45974 858 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 PAPOLAP51003 745 aaKnown RBP6.32□□□□□ -1.4
HMGB4-202ENST00000458277 ZNF75DP51815 510 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 GPLD1P80108 840 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 AKAP17AQ02040 695 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms