RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 CEP57L1Q8IYX8 460 aa18.68■□□□□ 0.58
CAPN13-203ENST00000458085 PIM2Q9P1W9 311 aa18.68■□□□□ 0.58
CAPN13-203ENST00000458085 SEC63Q9UGP8 760 aaKnown RBP18.68■□□□□ 0.58
CAPN13-203ENST00000458085 TCP10L2B9ZVM9 353 aa18.67■□□□□ 0.58
CAPN13-203ENST00000458085 BMP15O95972 392 aa18.67■□□□□ 0.58
CAPN13-203ENST00000458085 PRR29P0C7W0 189 aa18.67■□□□□ 0.58
CAPN13-203ENST00000458085 NLRP12P59046 1061 aa18.67■□□□□ 0.58
CAPN13-203ENST00000458085 SEPT2Q15019 361 aa18.67■□□□□ 0.58
CAPN13-203ENST00000458085 INF2Q27J81 1249 aa18.67■□□□□ 0.58
CAPN13-203ENST00000458085 KCTD1Q719H9 257 aa18.67■□□□□ 0.58
CAPN13-203ENST00000458085 SIAH1Q8IUQ4 282 aa18.67■□□□□ 0.58
CAPN13-203ENST00000458085 AOPEPQ8N6M6 819 aa18.67■□□□□ 0.58
CAPN13-203ENST00000458085 C4orf32Q8N8J7 132 aa18.67■□□□□ 0.58
CAPN13-203ENST00000458085 SYMPKQ92797 1274 aaKnown RBP18.67■□□□□ 0.58
CAPN13-203ENST00000458085 ATRNL1Q5VV63 1379 aa18.67■□□□□ 0.58
CAPN13-203ENST00000458085 CCDC194A0A1B0GVG4 234 aa18.67■□□□□ 0.58
CAPN13-203ENST00000458085 SMCO2A6NFE2 343 aa18.67■□□□□ 0.58
CAPN13-203ENST00000458085 ACTN4O43707 911 aaKnown RBP18.67■□□□□ 0.58
CAPN13-203ENST00000458085 ENTPD3O75355 529 aa18.67■□□□□ 0.58
CAPN13-203ENST00000458085 EEF2P13639 858 aaKnown RBP18.67■□□□□ 0.58
CAPN13-203ENST00000458085 SLC16A2P36021 539 aa18.67■□□□□ 0.58
CAPN13-203ENST00000458085 FERMT2Q96AC1 680 aa18.67■□□□□ 0.58
CAPN13-203ENST00000458085 COA7Q96BR5 231 aa18.67■□□□□ 0.58
CAPN13-203ENST00000458085 PCDHA5Q9Y5H7 936 aa18.67■□□□□ 0.58
CAPN13-203ENST00000458085 GALNT17Q6IS24 598 aa18.66■□□□□ 0.58
CAPN13-203ENST00000458085 JMJD4Q9H9V9 463 aa18.66■□□□□ 0.58
CAPN13-203ENST00000458085 PPP1R1BQ9UD71 204 aaPredicted RBP18.66■□□□□ 0.58
CAPN13-203ENST00000458085 TGFB2P61812 414 aa18.66■□□□□ 0.58
CAPN13-203ENST00000458085 ADGRF4Q8IZF3 695 aa18.66■□□□□ 0.58
CAPN13-203ENST00000458085 SPC24Q8NBT2 197 aa18.66■□□□□ 0.58
CAPN13-203ENST00000458085 ZNF830Q96NB3 372 aaPredicted RBP18.66■□□□□ 0.58
CAPN13-203ENST00000458085 CSRNP1Q96S65 589 aa18.66■□□□□ 0.58
CAPN13-203ENST00000458085 TRIM34Q9BYJ4 488 aa18.66■□□□□ 0.58
CAPN13-203ENST00000458085 ZNRF3Q9ULT6 936 aa18.66■□□□□ 0.58
CAPN13-203ENST00000458085 GOLGA6L19H0YKK7 550 aa18.65■□□□□ 0.58
CAPN13-203ENST00000458085 PPP1R11O60927 126 aaPredicted RBP18.65■□□□□ 0.58
CAPN13-203ENST00000458085 ZRSR1Q15695 479 aaKnown RBP18.65■□□□□ 0.58
CAPN13-203ENST00000458085 CCDC96Q2M329 555 aa18.65■□□□□ 0.58
CAPN13-203ENST00000458085 NIM1KQ8IY84 436 aa18.65■□□□□ 0.58
CAPN13-203ENST00000458085 TMEM60Q9H2L4 133 aa18.65■□□□□ 0.58
CAPN13-203ENST00000458085 ZNF70Q9UC06 446 aaPredicted RBP18.65■□□□□ 0.58
CAPN13-203ENST00000458085 BECN2A8MW95 431 aa18.65■□□□□ 0.58
CAPN13-203ENST00000458085 DLGAP5Q15398 846 aa18.65■□□□□ 0.58
CAPN13-203ENST00000458085 PLA2G4DQ86XP0 818 aa18.65■□□□□ 0.58
CAPN13-203ENST00000458085 DHX58Q96C10 678 aa18.65■□□□□ 0.58
CAPN13-203ENST00000458085 TRIM5Q9C035 493 aa18.65■□□□□ 0.58
CAPN13-203ENST00000458085 ZKSCAN5Q9Y2L8 839 aa18.65■□□□□ 0.58
CAPN13-203ENST00000458085 BRCA1P38398 1863 aaKnown RBP18.64■□□□□ 0.58
CAPN13-203ENST00000458085 RAD21O60216 631 aa18.64■□□□□ 0.57
CAPN13-203ENST00000458085 BMP6P22004 513 aa18.64■□□□□ 0.57
CAPN13-203ENST00000458085 ZNF75DP51815 510 aa18.64■□□□□ 0.57
CAPN13-203ENST00000458085 CXCL9Q07325 125 aa18.64■□□□□ 0.57
CAPN13-203ENST00000458085 POSTNQ15063 836 aa18.64■□□□□ 0.57
CAPN13-203ENST00000458085 CDAN1Q8IWY9 1227 aa18.64■□□□□ 0.57
CAPN13-203ENST00000458085 MTFR1LQ9H019 292 aa18.64■□□□□ 0.57
CAPN13-203ENST00000458085 KANSL2Q9H9L4 492 aa18.64■□□□□ 0.57
CAPN13-203ENST00000458085 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.64■□□□□ 0.57
CAPN13-203ENST00000458085 SHTN1A0MZ66 631 aa18.63■□□□□ 0.57
CAPN13-203ENST00000458085 CLCN1P35523 988 aa18.63■□□□□ 0.57
CAPN13-203ENST00000458085 R3HDM1Q15032 1099 aaKnown RBP18.63■□□□□ 0.57
CAPN13-203ENST00000458085 ABCB5Q2M3G0 1257 aa18.63■□□□□ 0.57
CAPN13-203ENST00000458085 DALRD3Q5D0E6 543 aaKnown RBP18.63■□□□□ 0.57
CAPN13-203ENST00000458085 CCDC12Q8WUD4 166 aaPredicted RBP18.63■□□□□ 0.57
CAPN13-203ENST00000458085 MKL1Q969V6 931 aa18.63■□□□□ 0.57
CAPN13-203ENST00000458085 C6orf50Q9HD87 102 aa18.63■□□□□ 0.57
CAPN13-203ENST00000458085 TMEM260Q9NX78 707 aa18.63■□□□□ 0.57
CAPN13-203ENST00000458085 NYAP2Q9P242 653 aa18.63■□□□□ 0.57
CAPN13-203ENST00000458085 BIN2Q9UBW5 565 aaPredicted RBP18.63■□□□□ 0.57
CAPN13-203ENST00000458085 CNTNAP1P78357 1384 aa18.63■□□□□ 0.57
CAPN13-203ENST00000458085 USP17L10C9JJH3 530 aa18.63■□□□□ 0.57
CAPN13-203ENST00000458085 POLD1P28340 1107 aa18.63■□□□□ 0.57
CAPN13-203ENST00000458085 ICA1Q05084 483 aa18.63■□□□□ 0.57
CAPN13-203ENST00000458085 SOGA3Q5TF21 947 aa18.63■□□□□ 0.57
CAPN13-203ENST00000458085 ELOA2Q8IYF1 753 aaPredicted RBP18.63■□□□□ 0.57
CAPN13-203ENST00000458085 FAM177A1Q8N128 213 aaPredicted RBP18.63■□□□□ 0.57
CAPN13-203ENST00000458085 OGFOD1Q8N543 542 aa18.63■□□□□ 0.57
CAPN13-203ENST00000458085 NAT10Q9H0A0 1025 aaKnown RBP18.63■□□□□ 0.57
CAPN13-203ENST00000458085 HDAC9Q9UKV0 1011 aa18.63■□□□□ 0.57
CAPN13-203ENST00000458085 FER1L6Q2WGJ9 1857 aa18.62■□□□□ 0.57
CAPN13-203ENST00000458085 GH2P01242 217 aa18.62■□□□□ 0.57
CAPN13-203ENST00000458085 CDC25AP30304 524 aa18.62■□□□□ 0.57
CAPN13-203ENST00000458085 GPATCH4Q5T3I0 446 aaKnown RBP18.62■□□□□ 0.57
CAPN13-203ENST00000458085 JAKMIP3Q5VZ66 844 aa18.62■□□□□ 0.57
CAPN13-203ENST00000458085 TMEM179Q6ZVK1 233 aa18.62■□□□□ 0.57
CAPN13-203ENST00000458085 TTC12Q9H892 705 aaPredicted RBP18.62■□□□□ 0.57
CAPN13-203ENST00000458085 NFKBIEO00221 500 aa18.62■□□□□ 0.57
CAPN13-203ENST00000458085 CASP1P29466 404 aa18.62■□□□□ 0.57
CAPN13-203ENST00000458085 GNA11P29992 359 aa18.62■□□□□ 0.57
CAPN13-203ENST00000458085 NCAPHQ15003 741 aa18.62■□□□□ 0.57
CAPN13-203ENST00000458085 SPDYE2Q495Y8 402 aa18.62■□□□□ 0.57
CAPN13-203ENST00000458085 CCDC125Q86Z20 511 aa18.62■□□□□ 0.57
CAPN13-203ENST00000458085 BPIFA3Q9BQP9 254 aa18.62■□□□□ 0.57
CAPN13-203ENST00000458085 VPS33BQ9H267 617 aa18.62■□□□□ 0.57
CAPN13-203ENST00000458085 TMOD2Q9NZR1 351 aa18.62■□□□□ 0.57
CAPN13-203ENST00000458085 COL2A1P02458 1487 aaPredicted RBP18.62■□□□□ 0.57
CAPN13-203ENST00000458085 PNMA6FA0A0J9YX94 578 aa18.61■□□□□ 0.57
CAPN13-203ENST00000458085 ESYT2A0FGR8 921 aa18.61■□□□□ 0.57
CAPN13-203ENST00000458085 MSNP26038 577 aaKnown RBP18.61■□□□□ 0.57
CAPN13-203ENST00000458085 SLFN13Q68D06 897 aa18.61■□□□□ 0.57
CAPN13-203ENST00000458085 TAOK3Q9H2K8 898 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms