RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 TMEM67Q5HYA8 995 aa14.32□□□□□ -0.12
CNOT3-205ENST00000457463 WDR78Q5VTH9 848 aa14.32□□□□□ -0.12
CNOT3-205ENST00000457463 RNF20Q5VTR2 975 aa14.32□□□□□ -0.12
CNOT3-205ENST00000457463 CPXCR1Q8N123 301 aa14.32□□□□□ -0.12
CNOT3-205ENST00000457463 UBA5Q9GZZ9 404 aa14.32□□□□□ -0.12
CNOT3-205ENST00000457463 LY9Q9HBG7 655 aa14.32□□□□□ -0.12
CNOT3-205ENST00000457463 SLC38A10Q9HBR0 1119 aa14.32□□□□□ -0.12
CNOT3-205ENST00000457463 SH2B2O14492 632 aaPredicted RBP14.31□□□□□ -0.12
CNOT3-205ENST00000457463 MCM5P33992 734 aa14.31□□□□□ -0.12
CNOT3-205ENST00000457463 STAT3P40763 770 aa14.31□□□□□ -0.12
CNOT3-205ENST00000457463 SLC4A3P48751 1232 aa14.31□□□□□ -0.12
CNOT3-205ENST00000457463 EXOSC10Q01780 885 aaKnown RBP14.31□□□□□ -0.12
CNOT3-205ENST00000457463 IKQ13123 557 aaPredicted RBP14.31□□□□□ -0.12
CNOT3-205ENST00000457463 WTAPQ15007 396 aa14.31□□□□□ -0.12
CNOT3-205ENST00000457463 ARHGEF6Q15052 776 aa14.31□□□□□ -0.12
CNOT3-205ENST00000457463 PKN2Q16513 984 aaKnown RBP14.31□□□□□ -0.12
CNOT3-205ENST00000457463 PLEKHH3Q7Z736 793 aa14.31□□□□□ -0.12
CNOT3-205ENST00000457463 NCAPG2Q86XI2 1143 aa14.31□□□□□ -0.12
CNOT3-205ENST00000457463 RAB11FIP4Q86YS3 637 aa14.31□□□□□ -0.12
CNOT3-205ENST00000457463 STAG2Q8N3U4 1231 aa14.31□□□□□ -0.12
CNOT3-205ENST00000457463 MB21D1Q8N884 522 aa14.31□□□□□ -0.12
CNOT3-205ENST00000457463 SH3TC2Q8TF17 1288 aa14.31□□□□□ -0.12
CNOT3-205ENST00000457463 COA7Q96BR5 231 aa14.31□□□□□ -0.12
CNOT3-205ENST00000457463 MYL10Q9BUA6 226 aa14.31□□□□□ -0.12
CNOT3-205ENST00000457463 ZNF536O15090 1300 aa14.31□□□□□ -0.12
CNOT3-205ENST00000457463 MGAMO43451 1857 aa14.31□□□□□ -0.12
CNOT3-205ENST00000457463 PLA2G6O60733 806 aa14.3□□□□□ -0.12
CNOT3-205ENST00000457463 ZBED4O75132 1171 aa14.3□□□□□ -0.12
CNOT3-205ENST00000457463 GNRH1P01148 92 aa14.3□□□□□ -0.12
CNOT3-205ENST00000457463 CYP2B6P20813 491 aa14.3□□□□□ -0.12
CNOT3-205ENST00000457463 HOXD10P28358 340 aa14.3□□□□□ -0.12
CNOT3-205ENST00000457463 MAPK4P31152 587 aa14.3□□□□□ -0.12
CNOT3-205ENST00000457463 CCNA1P78396 465 aa14.3□□□□□ -0.12
CNOT3-205ENST00000457463 SLC35G1Q2M3R5 365 aa14.3□□□□□ -0.12
CNOT3-205ENST00000457463 C8orf34Q49A92 452 aa14.3□□□□□ -0.12
CNOT3-205ENST00000457463 MORN1Q5T089 497 aa14.3□□□□□ -0.12
CNOT3-205ENST00000457463 SYDE2Q5VT97 1194 aa14.3□□□□□ -0.12
CNOT3-205ENST00000457463 SNRNP48Q6IEG0 339 aaKnown RBP14.3□□□□□ -0.12
CNOT3-205ENST00000457463 CCDC174Q6PII3 467 aa14.3□□□□□ -0.12
CNOT3-205ENST00000457463 BTNL9Q6UXG8 535 aa14.3□□□□□ -0.12
CNOT3-205ENST00000457463 FAM160B2Q86V87 743 aa14.3□□□□□ -0.12
CNOT3-205ENST00000457463 RIOX2Q8IUF8 465 aa14.3□□□□□ -0.12
CNOT3-205ENST00000457463 CCAR1Q8IX12 1150 aaKnown RBP14.3□□□□□ -0.12
CNOT3-205ENST00000457463 CHURC1Q8WUH1 139 aa14.3□□□□□ -0.12
CNOT3-205ENST00000457463 AGBL1Q96MI9 1066 aa14.3□□□□□ -0.12
CNOT3-205ENST00000457463 JAKMIP1Q96N16 626 aaKnown RBP14.3□□□□□ -0.12
CNOT3-205ENST00000457463 DOCK3Q8IZD9 2030 aa14.3□□□□□ -0.12
CNOT3-205ENST00000457463 COL11A1P12107 1806 aaPredicted RBP14.29□□□□□ -0.12
CNOT3-205ENST00000457463 ERICH2A1L162 156 aa14.29□□□□□ -0.12
CNOT3-205ENST00000457463 MYCP01106 439 aaPredicted RBP14.29□□□□□ -0.12
CNOT3-205ENST00000457463 ELNP15502 786 aa14.29□□□□□ -0.12
CNOT3-205ENST00000457463 ZKSCAN1P17029 563 aaPredicted RBP14.29□□□□□ -0.12
CNOT3-205ENST00000457463 RXRAP19793 462 aa14.29□□□□□ -0.12
CNOT3-205ENST00000457463 PTPREP23469 700 aa14.29□□□□□ -0.12
CNOT3-205ENST00000457463 TROAPQ12815 778 aa14.29□□□□□ -0.12
CNOT3-205ENST00000457463 DHX32Q7L7V1 743 aaKnown RBP14.29□□□□□ -0.12
CNOT3-205ENST00000457463 RAET1EQ8TD07 263 aa14.29□□□□□ -0.12
CNOT3-205ENST00000457463 USP6NLQ92738 828 aa14.29□□□□□ -0.12
CNOT3-205ENST00000457463 MAD2L2Q9UI95 211 aa14.29□□□□□ -0.12
CNOT3-205ENST00000457463 PLXNB2O15031 1838 aa14.29□□□□□ -0.12
CNOT3-205ENST00000457463 ATP2A1O14983 1001 aa14.28□□□□□ -0.12
CNOT3-205ENST00000457463 PARP1P09874 1014 aaKnown RBP14.28□□□□□ -0.12
CNOT3-205ENST00000457463 TRIM32Q13049 653 aa14.28□□□□□ -0.12
CNOT3-205ENST00000457463 GRB14Q14449 540 aa14.28□□□□□ -0.12
CNOT3-205ENST00000457463 SART3Q15020 963 aaKnown RBP14.28□□□□□ -0.12
CNOT3-205ENST00000457463 CCL14Q16627 93 aa14.28□□□□□ -0.12
CNOT3-205ENST00000457463 NBPF11Q86T75 865 aa14.28□□□□□ -0.12
CNOT3-205ENST00000457463 SHCBP1Q8NEM2 672 aa14.28□□□□□ -0.12
CNOT3-205ENST00000457463 NPLOC4Q8TAT6 608 aa14.28□□□□□ -0.12
CNOT3-205ENST00000457463 NUP133Q8WUM0 1156 aa14.28□□□□□ -0.12
CNOT3-205ENST00000457463 TMEM87BQ96K49 555 aa14.28□□□□□ -0.12
CNOT3-205ENST00000457463 NUDT12Q9BQG2 462 aa14.28□□□□□ -0.12
CNOT3-205ENST00000457463 TEX13BQ9BXU2 312 aa14.28□□□□□ -0.12
CNOT3-205ENST00000457463 RANBP17Q9H2T7 1088 aaKnown RBP14.28□□□□□ -0.12
CNOT3-205ENST00000457463 CWC22Q9HCG8 908 aaKnown RBP14.28□□□□□ -0.12
CNOT3-205ENST00000457463 VAT1LQ9HCJ6 419 aa14.28□□□□□ -0.12
CNOT3-205ENST00000457463 BRCA2P51587 3418 aa14.27□□□□□ -0.12
CNOT3-205ENST00000457463 PALM3A6NDB9 673 aaPredicted RBP14.27□□□□□ -0.13
CNOT3-205ENST00000457463 EPB41L2O43491 1005 aaKnown RBP14.27□□□□□ -0.13
CNOT3-205ENST00000457463 ADCY3O60266 1144 aa14.27□□□□□ -0.13
CNOT3-205ENST00000457463 COBLO75128 1261 aa14.27□□□□□ -0.13
CNOT3-205ENST00000457463 CAPN15O75808 1086 aa14.27□□□□□ -0.13
CNOT3-205ENST00000457463 PRMT2P55345 433 aa14.27□□□□□ -0.13
CNOT3-205ENST00000457463 IRF5Q13568 498 aa14.27□□□□□ -0.13
CNOT3-205ENST00000457463 KRT32Q14532 448 aa14.27□□□□□ -0.13
CNOT3-205ENST00000457463 GRM4Q14833 912 aa14.27□□□□□ -0.13
CNOT3-205ENST00000457463 CCDC144CPQ8IYA2 1237 aa14.27□□□□□ -0.13
CNOT3-205ENST00000457463 ZNF654Q8IZM8 581 aa14.27□□□□□ -0.13
CNOT3-205ENST00000457463 MROH8Q9H579 483 aa14.27□□□□□ -0.13
CNOT3-205ENST00000457463 HOMER2Q9NSB8 354 aa14.27□□□□□ -0.13
CNOT3-205ENST00000457463 FLRT1Q9NZU1 646 aa14.27□□□□□ -0.13
CNOT3-205ENST00000457463 BRPF3Q9ULD4 1205 aa14.27□□□□□ -0.13
CNOT3-205ENST00000457463 CTDP1Q9Y5B0 961 aaPredicted RBP14.27□□□□□ -0.13
CNOT3-205ENST00000457463 CCDC85CA6NKD9 419 aa14.26□□□□□ -0.13
CNOT3-205ENST00000457463 SLC25A27O95847 323 aa14.26□□□□□ -0.13
CNOT3-205ENST00000457463 PGK2P07205 417 aa14.26□□□□□ -0.13
CNOT3-205ENST00000457463 ADORA2AP29274 412 aa14.26□□□□□ -0.13
CNOT3-205ENST00000457463 GRK4P32298 578 aa14.26□□□□□ -0.13
CNOT3-205ENST00000457463 LIFRP42702 1097 aa14.26□□□□□ -0.13
CNOT3-205ENST00000457463 MAP2K5Q13163 448 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms