RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 WDR18Q9BV38 432 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 TMEM39BQ9GZU3 492 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 UBA5Q9GZZ9 404 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 GLT8D2Q9H1C3 349 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 CLSTN2Q9H4D0 955 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 BRMS1Q9HCU9 246 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 DACT1Q9NYF0 836 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 FBXO2Q9UK22 296 aaPredicted RBP8.6□□□□□ -1.03
ERCC3-204ENST00000456257 CEP131Q9UPN4 1083 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 hCG_1642624A0A1W2PR95 340 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 GOLGA6L4A6NEF3 574 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 GOLGA6L3A6NEY3 463 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 FAM196BA6NMK8 535 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 ZBTB5O15062 677 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 PPP1R11O60927 126 aaPredicted RBP8.59□□□□□ -1.03
ERCC3-204ENST00000456257 NDUFB10O96000 172 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 GOLGA8HP0CJ92 632 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 XRCC6P12956 609 aaKnown RBP eCLIP8.59□□□□□ -1.03
ERCC3-204ENST00000456257 YBX3P16989 372 aaKnown RBP eCLIP8.59□□□□□ -1.03
ERCC3-204ENST00000456257 GNA11P29992 359 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 ME1P48163 572 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 CLK2P49760 499 aaKnown RBP8.59□□□□□ -1.03
ERCC3-204ENST00000456257 FOSBP53539 338 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 ATP2C1P98194 919 aaPredicted RBP8.59□□□□□ -1.03
ERCC3-204ENST00000456257 ICA1Q05084 483 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 STK38Q15208 465 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 SHROOM1Q2M3G4 852 aaPredicted RBP8.59□□□□□ -1.03
ERCC3-204ENST00000456257 L1TD1Q5T7N2 865 aaKnown RBP8.59□□□□□ -1.03
ERCC3-204ENST00000456257 MCTP2Q6DN12 878 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 TTBK2Q6IQ55 1244 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 SAMD7Q7Z3H4 446 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 APOBEC3FQ8IUX4 373 aaKnown RBP8.59□□□□□ -1.03
ERCC3-204ENST00000456257 LRRC47Q8N1G4 583 aaKnown RBP8.59□□□□□ -1.03
ERCC3-204ENST00000456257 KRI1Q8N9T8 703 aaKnown RBP8.59□□□□□ -1.03
ERCC3-204ENST00000456257 FERMT2Q96AC1 680 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 HOOK2Q96ED9 719 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 L3MBTL3Q96JM7 780 aaPredicted RBP8.59□□□□□ -1.03
ERCC3-204ENST00000456257 PIGSQ96S52 555 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 TRIM34Q9BYJ4 488 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 KIAA1683Q9H0B3 1180 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 GOLPH3LQ9H4A5 285 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 RIC8AQ9NPQ8 531 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 ZBTB21Q9ULJ3 1066 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 PCDHA6Q9UN73 950 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 PCDHB6Q9Y5E3 794 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 PCDHA8Q9Y5H6 950 aa8.59□□□□□ -1.03
ERCC3-204ENST00000456257 ZC3H4Q9UPT8 1303 aaKnown RBP8.58□□□□□ -1.04
ERCC3-204ENST00000456257 MPHOSPH10O00566 681 aaKnown RBP8.58□□□□□ -1.04
ERCC3-204ENST00000456257 PRPHP41219 470 aa8.58□□□□□ -1.04
ERCC3-204ENST00000456257 MDM2Q00987 491 aaPredicted RBP8.58□□□□□ -1.04
ERCC3-204ENST00000456257 TRAF1Q13077 416 aa8.58□□□□□ -1.04
ERCC3-204ENST00000456257 KIF4BQ2VIQ3 1234 aa8.58□□□□□ -1.04
ERCC3-204ENST00000456257 UVSSAQ2YD98 709 aa8.58□□□□□ -1.04
ERCC3-204ENST00000456257 KIAA1755Q5JYT7 1200 aa8.58□□□□□ -1.04
ERCC3-204ENST00000456257 SHC4Q6S5L8 630 aa8.58□□□□□ -1.04
ERCC3-204ENST00000456257 RASGRP2Q7LDG7 609 aa8.58□□□□□ -1.04
ERCC3-204ENST00000456257 KRT25Q7Z3Z0 450 aa8.58□□□□□ -1.04
ERCC3-204ENST00000456257 CLEC10AQ8IUN9 316 aa8.58□□□□□ -1.04
ERCC3-204ENST00000456257 CDAN1Q8IWY9 1227 aa8.58□□□□□ -1.04
ERCC3-204ENST00000456257 BICD2Q8TD16 824 aa8.58□□□□□ -1.04
ERCC3-204ENST00000456257 MRPS27Q92552 414 aaKnown RBP8.58□□□□□ -1.04
ERCC3-204ENST00000456257 VCPKMTQ9H867 229 aa8.58□□□□□ -1.04
ERCC3-204ENST00000456257 ARHGEF10LQ9HCE6 1279 aa8.58□□□□□ -1.04
ERCC3-204ENST00000456257 C6orf50Q9HD87 102 aa8.58□□□□□ -1.04
ERCC3-204ENST00000456257 HACL1Q9UJ83 578 aa8.58□□□□□ -1.04
ERCC3-204ENST00000456257 NOL7Q9UMY1 257 aaKnown RBP8.58□□□□□ -1.04
ERCC3-204ENST00000456257 DICER1Q9UPY3 1922 aaKnown RBP8.58□□□□□ -1.04
ERCC3-204ENST00000456257 BAZ2BQ9UIF8 2168 aaKnown RBP8.58□□□□□ -1.04
ERCC3-204ENST00000456257 FAM205CA6NFA0 338 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 SMCO2A6NFE2 343 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 USP17L10C9JJH3 530 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 LAD1O00515 517 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 WNT7AO00755 349 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 ZNF202O95125 648 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 CAVIN2O95810 425 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 BMP3P12645 472 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 EPS15P42566 896 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 SLC1A4P43007 532 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 NDUFA8P51970 172 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 MRPL12P52815 198 aaKnown RBP8.57□□□□□ -1.04
ERCC3-204ENST00000456257 CEBPZQ03701 1054 aaKnown RBP8.57□□□□□ -1.04
ERCC3-204ENST00000456257 GNL2Q13823 731 aaKnown RBP8.57□□□□□ -1.04
ERCC3-204ENST00000456257 TBC1D10BQ4KMP7 808 aaPredicted RBP8.57□□□□□ -1.04
ERCC3-204ENST00000456257 NOM1Q5C9Z4 860 aaKnown RBP8.57□□□□□ -1.04
ERCC3-204ENST00000456257 NOL9Q5SY16 702 aaKnown RBP8.57□□□□□ -1.04
ERCC3-204ENST00000456257 FSIP1Q8NA03 581 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 TRPM4Q8TD43 1214 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 ACER1Q8TDN7 264 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 ZC3H15Q8WU90 426 aaKnown RBP8.57□□□□□ -1.04
ERCC3-204ENST00000456257 CHURC1Q8WUH1 139 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 CRYGNQ8WXF5 182 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 LPAR1Q92633 364 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 GPKOWQ92917 476 aaPredicted RBP eCLIP8.57□□□□□ -1.04
ERCC3-204ENST00000456257 MBOAT7Q96N66 472 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 RBSNQ9H1K0 784 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 NUP62CLQ9H1M0 184 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 CPVLQ9H3G5 476 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 GRPEL1Q9HAV7 217 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 VEZTQ9HBM0 779 aa8.57□□□□□ -1.04
ERCC3-204ENST00000456257 GPCPD1Q9NPB8 672 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms