RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 SNRNP48Q6IEG0 339 aaKnown RBP19.16■□□□□ 0.66
GPC1-206ENST00000455111 NEDD1Q8NHV4 660 aa19.16■□□□□ 0.66
GPC1-206ENST00000455111 DIS3Q9Y2L1 958 aaKnown RBP19.16■□□□□ 0.66
GPC1-206ENST00000455111 APPP05067 770 aa19.15■□□□□ 0.66
GPC1-206ENST00000455111 ADCYAP1R1P41586 468 aa19.15■□□□□ 0.66
GPC1-206ENST00000455111 PPARAQ07869 468 aa19.15■□□□□ 0.66
GPC1-206ENST00000455111 TRIM60Q495X7 471 aa19.15■□□□□ 0.66
GPC1-206ENST00000455111 FERMT2Q96AC1 680 aa19.15■□□□□ 0.66
GPC1-206ENST00000455111 FSD1Q9BTV5 496 aa19.15■□□□□ 0.66
GPC1-206ENST00000455111 SLC38A10Q9HBR0 1119 aa19.15■□□□□ 0.66
GPC1-206ENST00000455111 RAVER2Q9HCJ3 691 aaKnown RBP19.15■□□□□ 0.66
GPC1-206ENST00000455111 IL17RBQ9NRM6 502 aa19.15■□□□□ 0.66
GPC1-206ENST00000455111 TRIM43BA6NCK2 446 aa19.14■□□□□ 0.65
GPC1-206ENST00000455111 ATP2A1O14983 1001 aa19.14■□□□□ 0.65
GPC1-206ENST00000455111 ADAMTS4O75173 837 aa19.14■□□□□ 0.65
GPC1-206ENST00000455111 PGK1P00558 417 aa19.14■□□□□ 0.65
GPC1-206ENST00000455111 ITGB8P26012 769 aa19.14■□□□□ 0.65
GPC1-206ENST00000455111 CTDSPL2Q05D32 466 aa19.14■□□□□ 0.65
GPC1-206ENST00000455111 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.14■□□□□ 0.65
GPC1-206ENST00000455111 GMCL1P1Q8NEA9 526 aa19.14■□□□□ 0.65
GPC1-206ENST00000455111 TRIM43Q96BQ3 446 aaPredicted RBP19.14■□□□□ 0.65
GPC1-206ENST00000455111 TEX13BQ9BXU2 312 aa19.14■□□□□ 0.65
GPC1-206ENST00000455111 ATP11BQ9Y2G3 1177 aa19.14■□□□□ 0.65
GPC1-206ENST00000455111 ZNF536O15090 1300 aa19.14■□□□□ 0.65
GPC1-206ENST00000455111 NMT2O60551 498 aa19.13■□□□□ 0.65
GPC1-206ENST00000455111 TFAP4Q01664 338 aa19.13■□□□□ 0.65
GPC1-206ENST00000455111 KCTD2Q14681 263 aa19.13■□□□□ 0.65
GPC1-206ENST00000455111 ZNF444Q8N0Y2 327 aaPredicted RBP19.13■□□□□ 0.65
GPC1-206ENST00000455111 CPXCR1Q8N123 301 aa19.13■□□□□ 0.65
GPC1-206ENST00000455111 PRPF38AQ8NAV1 312 aaKnown RBP19.13■□□□□ 0.65
GPC1-206ENST00000455111 ARRDC4Q8NCT1 418 aa19.13■□□□□ 0.65
GPC1-206ENST00000455111 KIFC2Q96AC6 838 aa19.13■□□□□ 0.65
GPC1-206ENST00000455111 CHMP4CQ96CF2 233 aa19.13■□□□□ 0.65
GPC1-206ENST00000455111 PDLIM7Q9NR12 457 aa19.13■□□□□ 0.65
GPC1-206ENST00000455111 SLC5A4Q9NY91 659 aa19.13■□□□□ 0.65
GPC1-206ENST00000455111 NRBP1Q9UHY1 535 aa19.13■□□□□ 0.65
GPC1-206ENST00000455111 PHF24Q9UPV7 400 aa19.13■□□□□ 0.65
GPC1-206ENST00000455111 MYADML2A6NDP7 307 aa19.12■□□□□ 0.65
GPC1-206ENST00000455111 TTLL1O95922 423 aa19.12■□□□□ 0.65
GPC1-206ENST00000455111 SLFN13Q68D06 897 aa19.12■□□□□ 0.65
GPC1-206ENST00000455111 CCSAPQ6IQ19 270 aaPredicted RBP19.12■□□□□ 0.65
GPC1-206ENST00000455111 MAMDC4Q6UXC1 1216 aa19.12■□□□□ 0.65
GPC1-206ENST00000455111 KATNBL1Q9H079 304 aa19.12■□□□□ 0.65
GPC1-206ENST00000455111 XPNPEP3Q9NQH7 507 aa19.12■□□□□ 0.65
GPC1-206ENST00000455111 ASTN1O14525 1302 aa19.11■□□□□ 0.65
GPC1-206ENST00000455111 KBTBD13C9JR72 458 aa19.11■□□□□ 0.65
GPC1-206ENST00000455111 ERC2O15083 957 aa19.11■□□□□ 0.65
GPC1-206ENST00000455111 MYCNP04198 464 aaPredicted RBP19.11■□□□□ 0.65
GPC1-206ENST00000455111 NOVP48745 357 aa19.11■□□□□ 0.65
GPC1-206ENST00000455111 C9orf50Q5SZB4 431 aa19.11■□□□□ 0.65
GPC1-206ENST00000455111 ANKRD45Q5TZF3 282 aa19.11■□□□□ 0.65
GPC1-206ENST00000455111 C1orf53Q5VUE5 145 aa19.11■□□□□ 0.65
GPC1-206ENST00000455111 GPR153Q6NV75 609 aa19.11■□□□□ 0.65
GPC1-206ENST00000455111 NAPBQ9H115 298 aa19.11■□□□□ 0.65
GPC1-206ENST00000455111 MTMR10Q9NXD2 777 aa19.11■□□□□ 0.65
GPC1-206ENST00000455111 DDX49Q9Y6V7 483 aaKnown RBP19.11■□□□□ 0.65
GPC1-206ENST00000455111 SYNRGQ9UMZ2 1314 aa19.1■□□□□ 0.65
GPC1-206ENST00000455111 A0A0D9SFI3 127 aa19.1■□□□□ 0.65
GPC1-206ENST00000455111 BMP3P12645 472 aa19.1■□□□□ 0.65
GPC1-206ENST00000455111 SLC4A3P48751 1232 aa19.1■□□□□ 0.65
GPC1-206ENST00000455111 PDE1AP54750 535 aa19.1■□□□□ 0.65
GPC1-206ENST00000455111 DEFB123Q8N688 67 aa19.1■□□□□ 0.65
GPC1-206ENST00000455111 KLHDC9Q8NEP7 349 aa19.1■□□□□ 0.65
GPC1-206ENST00000455111 FAM227BQ96M60 508 aa19.1■□□□□ 0.65
GPC1-206ENST00000455111 FEM1BQ9UK73 627 aa19.1■□□□□ 0.65
GPC1-206ENST00000455111 SYNPO2Q9UMS6 1093 aa19.1■□□□□ 0.65
GPC1-206ENST00000455111 SYNGAP1Q96PV0 1343 aa19.09■□□□□ 0.65
GPC1-206ENST00000455111 A0A1W2PQ45 241 aaPredicted RBP19.09■□□□□ 0.65
GPC1-206ENST00000455111 A0A1W2PQY0 241 aa19.09■□□□□ 0.65
GPC1-206ENST00000455111 FGRP09769 529 aa19.09■□□□□ 0.65
GPC1-206ENST00000455111 TSPY3P0CV98 308 aa19.09■□□□□ 0.65
GPC1-206ENST00000455111 TSPY8P0CW00 308 aa19.09■□□□□ 0.65
GPC1-206ENST00000455111 PTGS1P23219 599 aa19.09■□□□□ 0.65
GPC1-206ENST00000455111 COPB2P35606 906 aa19.09■□□□□ 0.65
GPC1-206ENST00000455111 EPHB4P54760 987 aa19.09■□□□□ 0.65
GPC1-206ENST00000455111 SNAP25P60880 206 aa19.09■□□□□ 0.65
GPC1-206ENST00000455111 CNTN2Q02246 1040 aa19.09■□□□□ 0.65
GPC1-206ENST00000455111 TLE2Q04725 743 aa19.09■□□□□ 0.65
GPC1-206ENST00000455111 HDAC1Q13547 482 aaPredicted RBP19.09■□□□□ 0.65
GPC1-206ENST00000455111 SHHQ15465 462 aa19.09■□□□□ 0.65
GPC1-206ENST00000455111 BADQ92934 168 aa19.09■□□□□ 0.65
GPC1-206ENST00000455111 AGBL1Q96MI9 1066 aa19.09■□□□□ 0.65
GPC1-206ENST00000455111 ANAPC4Q9UJX5 808 aa19.09■□□□□ 0.65
GPC1-206ENST00000455111 EYSQ5T1H1 3165 aa19.08■□□□□ 0.65
GPC1-206ENST00000455111 TMEM232C9JQI7 657 aa19.08■□□□□ 0.64
GPC1-206ENST00000455111 POTEB2H3BUK9 544 aa19.08■□□□□ 0.64
GPC1-206ENST00000455111 CTAGE5O15320 804 aa19.08■□□□□ 0.64
GPC1-206ENST00000455111 RARBP10826 455 aa19.08■□□□□ 0.64
GPC1-206ENST00000455111 AKR1A1P14550 325 aa19.08■□□□□ 0.64
GPC1-206ENST00000455111 ZNF589Q86UQ0 364 aaPredicted RBP19.08■□□□□ 0.64
GPC1-206ENST00000455111 GMCL1Q96IK5 515 aa19.08■□□□□ 0.64
GPC1-206ENST00000455111 SOWAHBA6NEL2 793 aa19.07■□□□□ 0.64
GPC1-206ENST00000455111 ZBED4O75132 1171 aa19.07■□□□□ 0.64
GPC1-206ENST00000455111 MCCP23508 829 aa19.07■□□□□ 0.64
GPC1-206ENST00000455111 PDE4BQ07343 736 aa19.07■□□□□ 0.64
GPC1-206ENST00000455111 KCTD1Q719H9 257 aa19.07■□□□□ 0.64
GPC1-206ENST00000455111 ZNF467Q7Z7K2 595 aaPredicted RBP19.07■□□□□ 0.64
GPC1-206ENST00000455111 FAM133AQ8N9E0 248 aa19.07■□□□□ 0.64
GPC1-206ENST00000455111 GUCD1Q96NT3 240 aa19.07■□□□□ 0.64
GPC1-206ENST00000455111 NACAP1Q9BZK3 213 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms