RNA–Protein interactions for RNA: ENST00000455076.1

TNRC18-208, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-208ENST00000455076 NEDD4P46934 1319 aa24.09■■□□□ 1.45
TNRC18-208ENST00000455076 CACNB2Q08289 660 aaPredicted RBP24.08■■□□□ 1.45
TNRC18-208ENST00000455076 FAM160B2Q86V87 743 aa24.08■■□□□ 1.45
TNRC18-208ENST00000455076 NPLOC4Q8TAT6 608 aa24.08■■□□□ 1.45
TNRC18-208ENST00000455076 RUFY2Q8WXA3 655 aa24.08■■□□□ 1.45
TNRC18-208ENST00000455076 TTC14Q96N46 770 aa24.08■■□□□ 1.45
TNRC18-208ENST00000455076 TOMM22Q9NS69 142 aa24.08■■□□□ 1.45
TNRC18-208ENST00000455076 FLRT1Q9NZU1 646 aa24.08■■□□□ 1.45
TNRC18-208ENST00000455076 ZNFX1Q9P2E3 1918 aaKnown RBP24.08■■□□□ 1.44
TNRC18-208ENST00000455076 TOP1P11387 765 aaKnown RBP24.07■■□□□ 1.44
TNRC18-208ENST00000455076 SLC1A4P43007 532 aa24.07■■□□□ 1.44
TNRC18-208ENST00000455076 STAT2P52630 851 aa24.07■■□□□ 1.44
TNRC18-208ENST00000455076 IMMTQ16891 758 aaKnown RBP24.07■■□□□ 1.44
TNRC18-208ENST00000455076 RRP12Q5JTH9 1297 aaKnown RBP24.07■■□□□ 1.44
TNRC18-208ENST00000455076 ESR2Q92731 530 aa24.07■■□□□ 1.44
TNRC18-208ENST00000455076 FCER1AP12319 257 aa24.06■■□□□ 1.44
TNRC18-208ENST00000455076 PRPF38BQ5VTL8 546 aaKnown RBP24.06■■□□□ 1.44
TNRC18-208ENST00000455076 MFSD14CQ5VZR4 134 aa24.06■■□□□ 1.44
TNRC18-208ENST00000455076 RCSD1Q6JBY9 416 aa24.06■■□□□ 1.44
TNRC18-208ENST00000455076 SAMD1Q6SPF0 538 aaPredicted RBP24.06■■□□□ 1.44
TNRC18-208ENST00000455076 ANKLE1Q8NAG6 615 aa24.06■■□□□ 1.44
TNRC18-208ENST00000455076 CHURC1Q8WUH1 139 aa24.06■■□□□ 1.44
TNRC18-208ENST00000455076 DCAF4Q8WV16 495 aa24.06■■□□□ 1.44
TNRC18-208ENST00000455076 SLC5A4Q9NY91 659 aa24.06■■□□□ 1.44
TNRC18-208ENST00000455076 FRMPD3Q5JV73 1810 aa24.05■■□□□ 1.44
TNRC18-208ENST00000455076 TMEM232C9JQI7 657 aa24.05■■□□□ 1.44
TNRC18-208ENST00000455076 SGSM2O43147 1006 aa24.05■■□□□ 1.44
TNRC18-208ENST00000455076 COBLO75128 1261 aa24.05■■□□□ 1.44
TNRC18-208ENST00000455076 ZBED4O75132 1171 aa24.05■■□□□ 1.44
TNRC18-208ENST00000455076 DPP9Q86TI2 863 aa24.05■■□□□ 1.44
TNRC18-208ENST00000455076 KIFC2Q96AC6 838 aa24.05■■□□□ 1.44
TNRC18-208ENST00000455076 TMEM47Q9BQJ4 181 aa24.05■■□□□ 1.44
TNRC18-208ENST00000455076 OGDHLQ9ULD0 1010 aa24.05■■□□□ 1.44
TNRC18-208ENST00000455076 FARP2O94887 1054 aaPredicted RBP24.04■■□□□ 1.44
TNRC18-208ENST00000455076 MCCP23508 829 aa24.04■■□□□ 1.44
TNRC18-208ENST00000455076 SNRNP48Q6IEG0 339 aaKnown RBP24.04■■□□□ 1.44
TNRC18-208ENST00000455076 DIS3Q9Y2L1 958 aaKnown RBP24.04■■□□□ 1.44
TNRC18-208ENST00000455076 PLXNA1Q9UIW2 1896 aa24.04■■□□□ 1.44
TNRC18-208ENST00000455076 SNHG28P0DPA3 235 aa24.03■■□□□ 1.44
TNRC18-208ENST00000455076 CCDC178Q5BJE1 867 aa24.03■■□□□ 1.44
TNRC18-208ENST00000455076 BTNL9Q6UXG8 535 aa24.03■■□□□ 1.44
TNRC18-208ENST00000455076 DGKHQ86XP1 1220 aa24.03■■□□□ 1.44
TNRC18-208ENST00000455076 MMP19Q99542 508 aa24.03■■□□□ 1.44
TNRC18-208ENST00000455076 CYBAP13498 195 aa24.02■■□□□ 1.44
TNRC18-208ENST00000455076 KCTD2Q14681 263 aa24.02■■□□□ 1.44
TNRC18-208ENST00000455076 ANKS1AQ92625 1134 aa24.02■■□□□ 1.44
TNRC18-208ENST00000455076 MAML3Q96JK9 1138 aa24.02■■□□□ 1.44
TNRC18-208ENST00000455076 CNNM2Q9H8M5 875 aa24.02■■□□□ 1.44
TNRC18-208ENST00000455076 RIPK3Q9Y572 518 aa24.02■■□□□ 1.44
TNRC18-208ENST00000455076 TFRCP02786 760 aaKnown RBP24.01■■□□□ 1.43
TNRC18-208ENST00000455076 CCND3P30281 292 aaPredicted RBP24.01■■□□□ 1.43
TNRC18-208ENST00000455076 ZNF792Q3KQV3 632 aa24.01■■□□□ 1.43
TNRC18-208ENST00000455076 BMP2KLQ5H9B9 411 aa24.01■■□□□ 1.43
TNRC18-208ENST00000455076 LHX8Q68G74 356 aa24.01■■□□□ 1.43
TNRC18-208ENST00000455076 KCTD1Q719H9 257 aa24.01■■□□□ 1.43
TNRC18-208ENST00000455076 RASGRP2Q7LDG7 609 aa24.01■■□□□ 1.43
TNRC18-208ENST00000455076 IQCA1Q86XH1 822 aa24.01■■□□□ 1.43
TNRC18-208ENST00000455076 CHST13Q8NET6 341 aa24.01■■□□□ 1.43
TNRC18-208ENST00000455076 KRT23Q9C075 422 aa24.01■■□□□ 1.43
TNRC18-208ENST00000455076 FBXO40Q9UH90 709 aa24.01■■□□□ 1.43
TNRC18-208ENST00000455076 ZNF536O15090 1300 aa24.01■■□□□ 1.43
TNRC18-208ENST00000455076 DNAJC25-GNG10A0A024R161 153 aa24■■□□□ 1.43
TNRC18-208ENST00000455076 MSCO60682 206 aa24■■□□□ 1.43
TNRC18-208ENST00000455076 KDM4AO75164 1064 aa24■■□□□ 1.43
TNRC18-208ENST00000455076 PDHBP11177 359 aa24■■□□□ 1.43
TNRC18-208ENST00000455076 MNX1P50219 401 aaPredicted RBP24■■□□□ 1.43
TNRC18-208ENST00000455076 RAVER2Q9HCJ3 691 aaKnown RBP24■■□□□ 1.43
TNRC18-208ENST00000455076 NRBP1Q9UHY1 535 aa24■■□□□ 1.43
TNRC18-208ENST00000455076 PRR12Q9ULL5 1215 aa24■■□□□ 1.43
TNRC18-208ENST00000455076 CTDP1Q9Y5B0 961 aaPredicted RBP24■■□□□ 1.43
TNRC18-208ENST00000455076 B4E1Z4 1266 aa23.99■■□□□ 1.43
TNRC18-208ENST00000455076 CYP2C19P33261 490 aa23.99■■□□□ 1.43
TNRC18-208ENST00000455076 PTH1RQ03431 593 aa23.99■■□□□ 1.43
TNRC18-208ENST00000455076 CPXCR1Q8N123 301 aa23.99■■□□□ 1.43
TNRC18-208ENST00000455076 U3KPZ7 1027 aaPredicted RBP23.99■■□□□ 1.43
TNRC18-208ENST00000455076 CEP290O15078 2479 aa23.99■■□□□ 1.43
TNRC18-208ENST00000455076 TKFCQ3LXA3 575 aa23.98■■□□□ 1.43
TNRC18-208ENST00000455076 MSL3Q8N5Y2 521 aaKnown RBP23.98■■□□□ 1.43
TNRC18-208ENST00000455076 TRPV1Q8NER1 839 aa23.98■■□□□ 1.43
TNRC18-208ENST00000455076 MAP4K1Q92918 833 aa23.98■■□□□ 1.43
TNRC18-208ENST00000455076 HTATIP2Q9BUP3 242 aa23.98■■□□□ 1.43
TNRC18-208ENST00000455076 RANBP17Q9H2T7 1088 aaKnown RBP23.98■■□□□ 1.43
TNRC18-208ENST00000455076 ZSWIM5Q9P217 1185 aa23.98■■□□□ 1.43
TNRC18-208ENST00000455076 CYP21A2P08686 494 aa23.97■■□□□ 1.43
TNRC18-208ENST00000455076 ZNF543Q08ER8 600 aa23.97■■□□□ 1.43
TNRC18-208ENST00000455076 IKQ13123 557 aaPredicted RBP23.97■■□□□ 1.43
TNRC18-208ENST00000455076 CCDC96Q2M329 555 aa23.97■■□□□ 1.43
TNRC18-208ENST00000455076 ZNF467Q7Z7K2 595 aaPredicted RBP23.97■■□□□ 1.43
TNRC18-208ENST00000455076 ZSCAN10Q96SZ4 725 aaPredicted RBP23.97■■□□□ 1.43
TNRC18-208ENST00000455076 DDX20Q9UHI6 824 aaKnown RBP23.97■■□□□ 1.43
TNRC18-208ENST00000455076 PGK2P07205 417 aa23.96■■□□□ 1.43
TNRC18-208ENST00000455076 NECAB2Q7Z6G3 386 aa23.96■■□□□ 1.43
TNRC18-208ENST00000455076 ENAHQ8N8S7 591 aaPredicted RBP23.96■■□□□ 1.43
TNRC18-208ENST00000455076 ZKSCAN3Q9BRR0 538 aa23.96■■□□□ 1.43
TNRC18-208ENST00000455076 TINF2Q9BSI4 451 aa23.96■■□□□ 1.43
TNRC18-208ENST00000455076 ISY1Q9ULR0 285 aaKnown RBP23.96■■□□□ 1.43
TNRC18-208ENST00000455076 TNKSO95271 1327 aa23.95■■□□□ 1.42
TNRC18-208ENST00000455076 GPATCH4Q5T3I0 446 aaKnown RBP23.95■■□□□ 1.42
TNRC18-208ENST00000455076 SYDE2Q5VT97 1194 aa23.95■■□□□ 1.42
TNRC18-208ENST00000455076 MAMDC4Q6UXC1 1216 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms