RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 MAGEF1Q9HAY2 307 aa7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 DACT1Q9NYF0 836 aa7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 BCS1LQ9Y276 419 aa7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 CLIC4Q9Y696 253 aa7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 CCDC194A0A1B0GVG4 234 aa7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 WNT10BO00744 389 aa7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 CTNND1O60716 968 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 FOSP01100 380 aaPredicted RBP7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 LONP1P36776 959 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 TOB1P50616 345 aaPredicted RBP7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 CCDC173Q0VFZ6 552 aa7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 AP3B2Q13367 1082 aa7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 SNW1Q13573 536 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 SASS6Q6UVJ0 657 aa7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 RAB11FIP4Q86YS3 637 aa7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 CHURC1Q8WUH1 139 aa7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 AIFM3Q96NN9 605 aa7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 BPIFA3Q9BQP9 254 aa7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 RIC8AQ9NPQ8 531 aa7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 ANO10Q9NW15 660 aa7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 MAP3K20Q9NYL2 800 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 VPS54Q9P1Q0 977 aa7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 RABGAP1Q9Y3P9 1069 aa7.81□□□□□ -1.16
ECHDC1-210ENST00000454859 SYCE3A1L190 88 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 MPHOSPH10O00566 681 aaKnown RBP7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 CYTH3O43739 400 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 EEF2P13639 858 aaKnown RBP7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 CAP2P40123 477 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 DHX8Q14562 1220 aaKnown RBP7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 TTC38Q5R3I4 469 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 SLFN13Q68D06 897 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 WWC2Q6AWC2 1192 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 FAM173BQ6P4H8 233 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 STAG2Q8N3U4 1231 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 TRIML1Q8N9V2 468 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 DEFB129Q9H1M3 183 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 CUEDC2Q9H467 287 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 FBXO2Q9UK22 296 aaPredicted RBP7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 SCN4AP35499 1836 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 UNCXA6NJT0 531 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 USP17L5A8MUK1 530 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 LIG1P18858 919 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 SLC1A4P43007 532 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 SYKP43405 635 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 ADCY7P51828 1080 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 USP14P54578 494 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 NAPAP54920 295 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 EVX2Q03828 476 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 TCP10Q12799 353 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 NONOQ15233 471 aaKnown RBP eCLIP7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 STX1AQ16623 288 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 OTUD7BQ6GQQ9 843 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 ZFPM1Q8IX07 1006 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 CUL5Q93034 780 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 PPP1R9BQ96SB3 815 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 ZNF112Q9UJU3 913 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 ZBTB21Q9ULJ3 1066 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 KCNJ14Q9UNX9 436 aa7.8□□□□□ -1.16
ECHDC1-210ENST00000454859 F5H6K3 240 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 NR1I2O75469 434 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 BMP3P12645 472 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 PRKCSHP14314 528 aaPredicted RBP7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 TXLNAP40222 546 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 KLRC3Q07444 240 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 ZRSR1Q15695 479 aaKnown RBP7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 FOXD4L6Q3SYB3 417 aaPredicted RBP7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 PPP4R3AQ6IN85 833 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 USP17L2Q6R6M4 530 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 FOXD4L3Q6VB84 417 aaPredicted RBP7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 HEATR3Q7Z4Q2 680 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 REXO1Q8N1G1 1221 aaKnown RBP7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 FAM200AQ8TCP9 573 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 WDR18Q9BV38 432 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 RAB34Q9BZG1 259 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 JMJD4Q9H9V9 463 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 AS3MTQ9HBK9 375 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 CNOT7Q9UIV1 285 aaKnown RBP7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 FEM1BQ9UK73 627 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 RBBP6Q7Z6E9 1792 aaKnown RBP7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 SMCO2A6NFE2 343 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 PIK3CDO00329 1044 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 ZNF202O95125 648 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 XRCC6P12956 609 aaKnown RBP eCLIP7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 GMPSP49915 693 aaPredicted RBP7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 USP11P51784 963 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 KIF4BQ2VIQ3 1234 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 SUPT20HL1Q3ZLR7 823 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 ADGRF4Q8IZF3 695 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 ZC3H15Q8WU90 426 aaKnown RBP7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 SDF4Q9BRK5 362 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 AMNQ9BXJ7 453 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 ZNF341Q9BYN7 854 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 KIAA1683Q9H0B3 1180 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 VCPKMTQ9H867 229 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 EHMT1Q9H9B1 1298 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 GPRC5DQ9NZD1 345 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 DACH1Q9UI36 760 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 KCNH3Q9ULD8 1083 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 PCDHA6Q9UN73 950 aa7.79□□□□□ -1.16
ECHDC1-210ENST00000454859 PCDHA8Q9Y5H6 950 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms