RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 ARMT1Q9H993 441 aa11.96□□□□□ -0.49
CLCN4-204ENST00000454850 TBX21Q9UL17 535 aa11.96□□□□□ -0.49
CLCN4-204ENST00000454850 PRRC2BQ5JSZ5 2229 aaKnown RBP11.96□□□□□ -0.49
CLCN4-204ENST00000454850 MOXD2PA6NHM9 499 aa11.95□□□□□ -0.5
CLCN4-204ENST00000454850 GOLIM4O00461 696 aa11.95□□□□□ -0.5
CLCN4-204ENST00000454850 VWA5AO00534 786 aa11.95□□□□□ -0.5
CLCN4-204ENST00000454850 PRKAB2O43741 272 aa11.95□□□□□ -0.5
CLCN4-204ENST00000454850 C6orf222P0C671 652 aaPredicted RBP11.95□□□□□ -0.5
CLCN4-204ENST00000454850 EEF2P13639 858 aaKnown RBP11.95□□□□□ -0.5
CLCN4-204ENST00000454850 TTF1Q15361 905 aaPredicted RBP11.95□□□□□ -0.5
CLCN4-204ENST00000454850 FAM83BQ5T0W9 1011 aa11.95□□□□□ -0.5
CLCN4-204ENST00000454850 CCDC174Q6PII3 467 aa11.95□□□□□ -0.5
CLCN4-204ENST00000454850 C16orf59Q7L2K0 433 aa11.95□□□□□ -0.5
CLCN4-204ENST00000454850 GLT1D1Q96MS3 346 aa11.95□□□□□ -0.5
CLCN4-204ENST00000454850 IL1RAPL2Q9NP60 686 aa11.95□□□□□ -0.5
CLCN4-204ENST00000454850 ZNF214Q9UL59 606 aaPredicted RBP11.95□□□□□ -0.5
CLCN4-204ENST00000454850 FAM184BQ9ULE4 1060 aa11.95□□□□□ -0.5
CLCN4-204ENST00000454850 PPP1R9AQ9ULJ8 1098 aa11.95□□□□□ -0.5
CLCN4-204ENST00000454850 DIS3Q9Y2L1 958 aaKnown RBP11.95□□□□□ -0.5
CLCN4-204ENST00000454850 GREB1LQ9C091 1923 aaPredicted RBP11.95□□□□□ -0.5
CLCN4-204ENST00000454850 MROH7Q68CQ1 1323 aa11.94□□□□□ -0.5
CLCN4-204ENST00000454850 TCRBV5S4A2TA0A5A2 114 aa11.94□□□□□ -0.5
CLCN4-204ENST00000454850 MBD4O95243 580 aa11.94□□□□□ -0.5
CLCN4-204ENST00000454850 CDK8P49336 464 aa11.94□□□□□ -0.5
CLCN4-204ENST00000454850 MRPS5P82675 430 aaKnown RBP11.94□□□□□ -0.5
CLCN4-204ENST00000454850 ADGRE1Q14246 886 aa11.94□□□□□ -0.5
CLCN4-204ENST00000454850 SLFNL1Q499Z3 407 aa11.94□□□□□ -0.5
CLCN4-204ENST00000454850 AKNAD1Q5T1N1 836 aa11.94□□□□□ -0.5
CLCN4-204ENST00000454850 SNRNP48Q6IEG0 339 aaKnown RBP11.94□□□□□ -0.5
CLCN4-204ENST00000454850 ZNF365Q70YC5 407 aa11.94□□□□□ -0.5
CLCN4-204ENST00000454850 FTSJ3Q8IY81 847 aaKnown RBP11.94□□□□□ -0.5
CLCN4-204ENST00000454850 MICALL1Q8N3F8 863 aa11.94□□□□□ -0.5
CLCN4-204ENST00000454850 TMEM199Q8N511 208 aa11.94□□□□□ -0.5
CLCN4-204ENST00000454850 KLHDC9Q8NEP7 349 aa11.94□□□□□ -0.5
CLCN4-204ENST00000454850 DDX11Q96FC9 970 aa11.94□□□□□ -0.5
CLCN4-204ENST00000454850 NUP88Q99567 741 aaPredicted RBP11.94□□□□□ -0.5
CLCN4-204ENST00000454850 NKX2-4Q9H2Z4 354 aa11.94□□□□□ -0.5
CLCN4-204ENST00000454850 GOPCQ9HD26 462 aa11.94□□□□□ -0.5
CLCN4-204ENST00000454850 ADAMTS5Q9UNA0 930 aa11.94□□□□□ -0.5
CLCN4-204ENST00000454850 SYNGAP1Q96PV0 1343 aa11.93□□□□□ -0.5
CLCN4-204ENST00000454850 SCN5AQ14524 2016 aa11.93□□□□□ -0.5
CLCN4-204ENST00000454850 ADCY6O43306 1168 aa11.93□□□□□ -0.5
CLCN4-204ENST00000454850 SNAI1O95863 264 aaPredicted RBP11.93□□□□□ -0.5
CLCN4-204ENST00000454850 ASGR1P07306 291 aa11.93□□□□□ -0.5
CLCN4-204ENST00000454850 CYP2C18P33260 490 aa11.93□□□□□ -0.5
CLCN4-204ENST00000454850 COPB2P35606 906 aa11.93□□□□□ -0.5
CLCN4-204ENST00000454850 PLA2G5P39877 138 aa11.93□□□□□ -0.5
CLCN4-204ENST00000454850 CCSAPQ6IQ19 270 aaPredicted RBP11.93□□□□□ -0.5
CLCN4-204ENST00000454850 PSRC1Q6PGN9 363 aaPredicted RBP11.93□□□□□ -0.5
CLCN4-204ENST00000454850 ERC1Q8IUD2 1116 aa11.93□□□□□ -0.5
CLCN4-204ENST00000454850 REPS2Q8NFH8 660 aa11.93□□□□□ -0.5
CLCN4-204ENST00000454850 FAM122AQ96E09 287 aa11.93□□□□□ -0.5
CLCN4-204ENST00000454850 NECAB3Q96P71 396 aaPredicted RBP11.93□□□□□ -0.5
CLCN4-204ENST00000454850 MSRAQ9UJ68 235 aa11.93□□□□□ -0.5
CLCN4-204ENST00000454850 BRWD1Q9NSI6 2320 aa11.93□□□□□ -0.5
CLCN4-204ENST00000454850 ELP1O95163 1332 aa11.92□□□□□ -0.5
CLCN4-204ENST00000454850 LRRC37A2A6NM11 1700 aa11.92□□□□□ -0.5
CLCN4-204ENST00000454850 A0A0U1RQG5 324 aaPredicted RBP11.92□□□□□ -0.5
CLCN4-204ENST00000454850 TLR3O15455 904 aaKnown RBP11.92□□□□□ -0.5
CLCN4-204ENST00000454850 DUSP11O75319 330 aaKnown RBP11.92□□□□□ -0.5
CLCN4-204ENST00000454850 RAB30Q15771 203 aa11.92□□□□□ -0.5
CLCN4-204ENST00000454850 GNASQ5JWF2 1037 aa11.92□□□□□ -0.5
CLCN4-204ENST00000454850 RASIP1Q5U651 963 aa11.92□□□□□ -0.5
CLCN4-204ENST00000454850 CEP85Q6P2H3 762 aa11.92□□□□□ -0.5
CLCN4-204ENST00000454850 AMOTL1Q8IY63 956 aa11.92□□□□□ -0.5
CLCN4-204ENST00000454850 PCSK9Q8NBP7 692 aaKnown RBP11.92□□□□□ -0.5
CLCN4-204ENST00000454850 CCDC17Q96LX7 622 aa11.92□□□□□ -0.5
CLCN4-204ENST00000454850 TEX13BQ9BXU2 312 aa11.92□□□□□ -0.5
CLCN4-204ENST00000454850 SPC25Q9HBM1 224 aa11.92□□□□□ -0.5
CLCN4-204ENST00000454850 CXXC1Q9P0U4 656 aaPredicted RBP11.92□□□□□ -0.5
CLCN4-204ENST00000454850 RIPK3Q9Y572 518 aa11.92□□□□□ -0.5
CLCN4-204ENST00000454850 USP17L12C9JPN9 530 aa11.91□□□□□ -0.5
CLCN4-204ENST00000454850 USP17L21D6R901 530 aa11.91□□□□□ -0.5
CLCN4-204ENST00000454850 ARVCFO00192 962 aa11.91□□□□□ -0.5
CLCN4-204ENST00000454850 RLBP1P12271 317 aa11.91□□□□□ -0.5
CLCN4-204ENST00000454850 CST5P28325 142 aaPredicted RBP11.91□□□□□ -0.5
CLCN4-204ENST00000454850 CDK7P50613 346 aa11.91□□□□□ -0.5
CLCN4-204ENST00000454850 ACVR2BQ13705 512 aa11.91□□□□□ -0.5
CLCN4-204ENST00000454850 CCDC144BQ3MJ40 725 aa11.91□□□□□ -0.5
CLCN4-204ENST00000454850 C12orf60Q5U649 245 aa11.91□□□□□ -0.5
CLCN4-204ENST00000454850 C16orf86Q6ZW13 317 aa11.91□□□□□ -0.5
CLCN4-204ENST00000454850 FAM126BQ8IXS8 530 aa11.91□□□□□ -0.5
CLCN4-204ENST00000454850 CPXCR1Q8N123 301 aa11.91□□□□□ -0.5
CLCN4-204ENST00000454850 STK11IPQ8N1F8 1099 aa11.91□□□□□ -0.5
CLCN4-204ENST00000454850 MSL3Q8N5Y2 521 aaKnown RBP11.91□□□□□ -0.5
CLCN4-204ENST00000454850 SLF1Q9BQI6 1058 aa11.91□□□□□ -0.5
CLCN4-204ENST00000454850 KANSL2Q9H9L4 492 aa11.91□□□□□ -0.5
CLCN4-204ENST00000454850 SLC28A3Q9HAS3 691 aa11.91□□□□□ -0.5
CLCN4-204ENST00000454850 IL23AQ9NPF7 189 aa11.91□□□□□ -0.5
CLCN4-204ENST00000454850 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.91□□□□□ -0.5
CLCN4-204ENST00000454850 YBX2Q9Y2T7 364 aaKnown RBP11.91□□□□□ -0.5
CLCN4-204ENST00000454850 CTDP1Q9Y5B0 961 aaPredicted RBP11.91□□□□□ -0.5
CLCN4-204ENST00000454850 UMODL1Q5DID0 1318 aa11.9□□□□□ -0.5
CLCN4-204ENST00000454850 CHGBP05060 677 aa11.9□□□□□ -0.5
CLCN4-204ENST00000454850 RABGGTBP53611 331 aa11.9□□□□□ -0.5
CLCN4-204ENST00000454850 BEX3Q00994 111 aa11.9□□□□□ -0.5
CLCN4-204ENST00000454850 MAMDC4Q6UXC1 1216 aa11.9□□□□□ -0.5
CLCN4-204ENST00000454850 NOL8Q76FK4 1167 aaKnown RBP11.9□□□□□ -0.5
CLCN4-204ENST00000454850 OTOP2Q7RTS6 562 aa11.9□□□□□ -0.5
CLCN4-204ENST00000454850 ANKRD35Q8N283 1001 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms