RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 NUDT12Q9BQG2 462 aa16.65■□□□□ 0.26
HDAC4-205ENST00000454542 MTA3Q9BTC8 594 aa16.65■□□□□ 0.26
HDAC4-205ENST00000454542 TEX13BQ9BXU2 312 aa16.65■□□□□ 0.26
HDAC4-205ENST00000454542 MROH8Q9H579 483 aa16.65■□□□□ 0.26
HDAC4-205ENST00000454542 SLC15A5A6NIM6 579 aa16.64■□□□□ 0.25
HDAC4-205ENST00000454542 IGHA2P01877 340 aa16.64■□□□□ 0.25
HDAC4-205ENST00000454542 HOXC6P09630 235 aa16.64■□□□□ 0.25
HDAC4-205ENST00000454542 ZNF543Q08ER8 600 aa16.64■□□□□ 0.25
HDAC4-205ENST00000454542 TSGA10IPQ3SY00 556 aa16.64■□□□□ 0.25
HDAC4-205ENST00000454542 RALYLQ86SE5 291 aaKnown RBP16.64■□□□□ 0.25
HDAC4-205ENST00000454542 ABRAQ8N0Z2 381 aa16.64■□□□□ 0.25
HDAC4-205ENST00000454542 PNMA1Q8ND90 353 aa16.64■□□□□ 0.25
HDAC4-205ENST00000454542 KCNB2Q92953 911 aa16.64■□□□□ 0.25
HDAC4-205ENST00000454542 KIFC2Q96AC6 838 aa16.64■□□□□ 0.25
HDAC4-205ENST00000454542 APBA2Q99767 749 aa16.64■□□□□ 0.25
HDAC4-205ENST00000454542 UBAC1Q9BSL1 405 aa16.64■□□□□ 0.25
HDAC4-205ENST00000454542 ZNF536O15090 1300 aa16.64■□□□□ 0.25
HDAC4-205ENST00000454542 CCDC85CA6NKD9 419 aa16.63■□□□□ 0.25
HDAC4-205ENST00000454542 EPB41L2O43491 1005 aaKnown RBP16.63■□□□□ 0.25
HDAC4-205ENST00000454542 ADCY3O60266 1144 aa16.63■□□□□ 0.25
HDAC4-205ENST00000454542 STAT3P40763 770 aa16.63■□□□□ 0.25
HDAC4-205ENST00000454542 MAP2K5Q13163 448 aa16.63■□□□□ 0.25
HDAC4-205ENST00000454542 COL9A3Q14050 684 aaPredicted RBP16.63■□□□□ 0.25
HDAC4-205ENST00000454542 CCDC96Q2M329 555 aa16.63■□□□□ 0.25
HDAC4-205ENST00000454542 CHURC1Q8WUH1 139 aa16.63■□□□□ 0.25
HDAC4-205ENST00000454542 RANBP17Q9H2T7 1088 aaKnown RBP16.63■□□□□ 0.25
HDAC4-205ENST00000454542 PRR12Q9ULL5 1215 aa16.63■□□□□ 0.25
HDAC4-205ENST00000454542 PLXNA1Q9UIW2 1896 aa16.63■□□□□ 0.25
HDAC4-205ENST00000454542 ELNP15502 786 aa16.62■□□□□ 0.25
HDAC4-205ENST00000454542 RGS2P41220 211 aa16.62■□□□□ 0.25
HDAC4-205ENST00000454542 GPATCH4Q5T3I0 446 aaKnown RBP16.62■□□□□ 0.25
HDAC4-205ENST00000454542 IFIT1BQ5T764 474 aaKnown RBP16.62■□□□□ 0.25
HDAC4-205ENST00000454542 TTBK2Q6IQ55 1244 aa16.62■□□□□ 0.25
HDAC4-205ENST00000454542 SAMD1Q6SPF0 538 aaPredicted RBP16.62■□□□□ 0.25
HDAC4-205ENST00000454542 NBPF11Q86T75 865 aa16.62■□□□□ 0.25
HDAC4-205ENST00000454542 TRIB2Q92519 343 aa16.62■□□□□ 0.25
HDAC4-205ENST00000454542 KAT14Q9H8E8 782 aa16.62■□□□□ 0.25
HDAC4-205ENST00000454542 LCTP09848 1927 aa16.61■□□□□ 0.25
HDAC4-205ENST00000454542 STRNO43815 780 aa16.61■□□□□ 0.25
HDAC4-205ENST00000454542 ZBED4O75132 1171 aa16.61■□□□□ 0.25
HDAC4-205ENST00000454542 HMGCRP04035 888 aa16.61■□□□□ 0.25
HDAC4-205ENST00000454542 INHAP05111 366 aa16.61■□□□□ 0.25
HDAC4-205ENST00000454542 PLS1Q14651 629 aa16.61■□□□□ 0.25
HDAC4-205ENST00000454542 ASPRV1Q53RT3 343 aa16.61■□□□□ 0.25
HDAC4-205ENST00000454542 MAP3K21Q5TCX8 1036 aa16.61■□□□□ 0.25
HDAC4-205ENST00000454542 SYDE2Q5VT97 1194 aa16.61■□□□□ 0.25
HDAC4-205ENST00000454542 RNF20Q5VTR2 975 aa16.61■□□□□ 0.25
HDAC4-205ENST00000454542 SNRNP48Q6IEG0 339 aaKnown RBP16.61■□□□□ 0.25
HDAC4-205ENST00000454542 CCAR1Q8IX12 1150 aaKnown RBP16.61■□□□□ 0.25
HDAC4-205ENST00000454542 TRMT44Q8IYL2 757 aaKnown RBP16.61■□□□□ 0.25
HDAC4-205ENST00000454542 IVNS1ABPQ9Y6Y0 642 aa16.61■□□□□ 0.25
HDAC4-205ENST00000454542 FRMPD2Q68DX3 1309 aaPredicted RBP16.61■□□□□ 0.25
HDAC4-205ENST00000454542 FRMPD3Q5JV73 1810 aa16.61■□□□□ 0.25
HDAC4-205ENST00000454542 ZNFX1Q9P2E3 1918 aaKnown RBP16.6■□□□□ 0.25
HDAC4-205ENST00000454542 REC8O95072 547 aa16.6■□□□□ 0.25
HDAC4-205ENST00000454542 CYP2B6P20813 491 aa16.6■□□□□ 0.25
HDAC4-205ENST00000454542 ADORA2AP29274 412 aa16.6■□□□□ 0.25
HDAC4-205ENST00000454542 HSPA4P34932 840 aa16.6■□□□□ 0.25
HDAC4-205ENST00000454542 WDR78Q5VTH9 848 aa16.6■□□□□ 0.25
HDAC4-205ENST00000454542 NCAPG2Q86XI2 1143 aa16.6■□□□□ 0.25
HDAC4-205ENST00000454542 RASEFQ8IZ41 740 aa16.6■□□□□ 0.25
HDAC4-205ENST00000454542 IGDCC4Q8TDY8 1250 aa16.6■□□□□ 0.25
HDAC4-205ENST00000454542 SENP2Q9HC62 589 aa16.6■□□□□ 0.25
HDAC4-205ENST00000454542 RAVER2Q9HCJ3 691 aaKnown RBP16.6■□□□□ 0.25
HDAC4-205ENST00000454542 MTMR7Q9Y216 660 aa16.6■□□□□ 0.25
HDAC4-205ENST00000454542 RIPK3Q9Y572 518 aa16.6■□□□□ 0.25
HDAC4-205ENST00000454542 WDR19Q8NEZ3 1342 aa16.6■□□□□ 0.25
HDAC4-205ENST00000454542 LRRC37A2A6NM11 1700 aa16.59■□□□□ 0.25
HDAC4-205ENST00000454542 SH2B2O14492 632 aaPredicted RBP16.59■□□□□ 0.25
HDAC4-205ENST00000454542 IFIT3O14879 490 aaKnown RBP16.59■□□□□ 0.25
HDAC4-205ENST00000454542 CAPN15O75808 1086 aa16.59■□□□□ 0.25
HDAC4-205ENST00000454542 RGS19P49795 217 aa16.59■□□□□ 0.25
HDAC4-205ENST00000454542 UBXN2AP68543 259 aa16.59■□□□□ 0.25
HDAC4-205ENST00000454542 WTAPQ15007 396 aa16.59■□□□□ 0.25
HDAC4-205ENST00000454542 SART3Q15020 963 aaKnown RBP16.59■□□□□ 0.25
HDAC4-205ENST00000454542 MTFR1Q15390 333 aa16.59■□□□□ 0.25
HDAC4-205ENST00000454542 NPLOC4Q8TAT6 608 aa16.59■□□□□ 0.25
HDAC4-205ENST00000454542 CHMP4CQ96CF2 233 aa16.59■□□□□ 0.25
HDAC4-205ENST00000454542 LY9Q9HBG7 655 aa16.59■□□□□ 0.25
HDAC4-205ENST00000454542 CWC22Q9HCG8 908 aaKnown RBP16.59■□□□□ 0.25
HDAC4-205ENST00000454542 ISY1Q9ULR0 285 aaKnown RBP16.59■□□□□ 0.25
HDAC4-205ENST00000454542 PRC1O43663 620 aa16.58■□□□□ 0.24
HDAC4-205ENST00000454542 COBLO75128 1261 aa16.58■□□□□ 0.24
HDAC4-205ENST00000454542 ICAM1P05362 532 aa16.58■□□□□ 0.24
HDAC4-205ENST00000454542 ZKSCAN1P17029 563 aaPredicted RBP16.58■□□□□ 0.24
HDAC4-205ENST00000454542 MCM5P33992 734 aa16.58■□□□□ 0.24
HDAC4-205ENST00000454542 SLC16A2P36021 539 aa16.58■□□□□ 0.24
HDAC4-205ENST00000454542 SOX10P56693 466 aa16.58■□□□□ 0.24
HDAC4-205ENST00000454542 TROAPQ12815 778 aa16.58■□□□□ 0.24
HDAC4-205ENST00000454542 IKQ13123 557 aaPredicted RBP16.58■□□□□ 0.24
HDAC4-205ENST00000454542 CCL14Q16627 93 aa16.58■□□□□ 0.24
HDAC4-205ENST00000454542 TKFCQ3LXA3 575 aa16.58■□□□□ 0.24
HDAC4-205ENST00000454542 CHST3Q7LGC8 479 aa16.58■□□□□ 0.24
HDAC4-205ENST00000454542 CHST13Q8NET6 341 aa16.58■□□□□ 0.24
HDAC4-205ENST00000454542 TMEM87BQ96K49 555 aa16.58■□□□□ 0.24
HDAC4-205ENST00000454542 GPCPD1Q9NPB8 672 aa16.58■□□□□ 0.24
HDAC4-205ENST00000454542 PAK6Q9NQU5 681 aaPredicted RBP16.58■□□□□ 0.24
HDAC4-205ENST00000454542 FLRT1Q9NZU1 646 aa16.58■□□□□ 0.24
HDAC4-205ENST00000454542 DNAJC25-GNG10A0A024R161 153 aa16.57■□□□□ 0.24
HDAC4-205ENST00000454542 ERICH2A1L162 156 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms