RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 CCDC171Q6TFL3 1326 aa16.73■□□□□ 0.27
RFTN1-207ENST00000453536 STAT3P40763 770 aa16.73■□□□□ 0.27
RFTN1-207ENST00000453536 IRX5P78411 483 aaPredicted RBP16.73■□□□□ 0.27
RFTN1-207ENST00000453536 MCMDC2Q4G0Z9 681 aa16.73■□□□□ 0.27
RFTN1-207ENST00000453536 SLFN13Q68D06 897 aa16.73■□□□□ 0.27
RFTN1-207ENST00000453536 SNRNP48Q6IEG0 339 aaKnown RBP16.73■□□□□ 0.27
RFTN1-207ENST00000453536 KCTD1Q719H9 257 aa16.73■□□□□ 0.27
RFTN1-207ENST00000453536 RIOX2Q8IUF8 465 aa16.73■□□□□ 0.27
RFTN1-207ENST00000453536 MAML3Q96JK9 1138 aa16.73■□□□□ 0.27
RFTN1-207ENST00000453536 RANBP6O60518 1105 aaKnown RBP16.72■□□□□ 0.27
RFTN1-207ENST00000453536 TTLL1O95922 423 aa16.72■□□□□ 0.27
RFTN1-207ENST00000453536 PTGS1P23219 599 aa16.72■□□□□ 0.27
RFTN1-207ENST00000453536 MCCP23508 829 aa16.72■□□□□ 0.27
RFTN1-207ENST00000453536 PDE4BQ07343 736 aa16.72■□□□□ 0.27
RFTN1-207ENST00000453536 LRRC26Q2I0M4 334 aa16.72■□□□□ 0.27
RFTN1-207ENST00000453536 LRRFIP1Q32MZ4 808 aaKnown RBP16.72■□□□□ 0.27
RFTN1-207ENST00000453536 GJC2Q5T442 439 aaPredicted RBP16.72■□□□□ 0.27
RFTN1-207ENST00000453536 TTBK2Q6IQ55 1244 aa16.72■□□□□ 0.27
RFTN1-207ENST00000453536 CWC27Q6UX04 472 aaKnown RBP16.72■□□□□ 0.27
RFTN1-207ENST00000453536 NECAB2Q7Z6G3 386 aa16.72■□□□□ 0.27
RFTN1-207ENST00000453536 MB21D1Q8N884 522 aa16.72■□□□□ 0.27
RFTN1-207ENST00000453536 MKL1Q969V6 931 aa16.72■□□□□ 0.27
RFTN1-207ENST00000453536 FGD4Q96M96 766 aa16.72■□□□□ 0.27
RFTN1-207ENST00000453536 MMP19Q99542 508 aa16.72■□□□□ 0.27
RFTN1-207ENST00000453536 C11orf49Q9H6J7 331 aa16.72■□□□□ 0.27
RFTN1-207ENST00000453536 TOMM22Q9NS69 142 aa16.72■□□□□ 0.27
RFTN1-207ENST00000453536 HOMER2Q9NSB8 354 aa16.72■□□□□ 0.27
RFTN1-207ENST00000453536 STX8Q9UNK0 236 aa16.72■□□□□ 0.27
RFTN1-207ENST00000453536 TSPY2A6NKD2 308 aa16.71■□□□□ 0.27
RFTN1-207ENST00000453536 TMEM232C9JQI7 657 aa16.71■□□□□ 0.27
RFTN1-207ENST00000453536 EVI5O60447 810 aa16.71■□□□□ 0.27
RFTN1-207ENST00000453536 COL6A1P12109 1028 aa16.71■□□□□ 0.27
RFTN1-207ENST00000453536 FXR1P51114 621 aaKnown RBP eCLIP16.71■□□□□ 0.27
RFTN1-207ENST00000453536 MFSD14CQ5VZR4 134 aa16.71■□□□□ 0.27
RFTN1-207ENST00000453536 ZKSCAN3Q9BRR0 538 aa16.71■□□□□ 0.27
RFTN1-207ENST00000453536 HTATIP2Q9BUP3 242 aa16.71■□□□□ 0.27
RFTN1-207ENST00000453536 MROH8Q9H579 483 aa16.71■□□□□ 0.27
RFTN1-207ENST00000453536 DDX20Q9UHI6 824 aaKnown RBP16.71■□□□□ 0.27
RFTN1-207ENST00000453536 ANAPC4Q9UJX5 808 aa16.71■□□□□ 0.27
RFTN1-207ENST00000453536 FRMPD2Q68DX3 1309 aaPredicted RBP16.7■□□□□ 0.26
RFTN1-207ENST00000453536 LTBP2Q14767 1821 aa16.7■□□□□ 0.26
RFTN1-207ENST00000453536 MYCNP04198 464 aaPredicted RBP16.7■□□□□ 0.26
RFTN1-207ENST00000453536 FCER1AP12319 257 aa16.7■□□□□ 0.26
RFTN1-207ENST00000453536 BMP3P12645 472 aa16.7■□□□□ 0.26
RFTN1-207ENST00000453536 ATN1P54259 1190 aaPredicted RBP16.7■□□□□ 0.26
RFTN1-207ENST00000453536 ZNF792Q3KQV3 632 aa16.7■□□□□ 0.26
RFTN1-207ENST00000453536 GMCL1P1Q8NEA9 526 aa16.7■□□□□ 0.26
RFTN1-207ENST00000453536 AGBL1Q96MI9 1066 aa16.7■□□□□ 0.26
RFTN1-207ENST00000453536 PURBQ96QR8 312 aaKnown RBP16.7■□□□□ 0.26
RFTN1-207ENST00000453536 PRO3102Q9H379 93 aa16.7■□□□□ 0.26
RFTN1-207ENST00000453536 OSBPL3Q9H4L5 887 aa16.7■□□□□ 0.26
RFTN1-207ENST00000453536 ZNF536O15090 1300 aa16.7■□□□□ 0.26
RFTN1-207ENST00000453536 ADCY6O43306 1168 aa16.69■□□□□ 0.26
RFTN1-207ENST00000453536 SLC16A2P36021 539 aa16.69■□□□□ 0.26
RFTN1-207ENST00000453536 ALX1Q15699 326 aa16.69■□□□□ 0.26
RFTN1-207ENST00000453536 OLFML2BQ68BL8 750 aa16.69■□□□□ 0.26
RFTN1-207ENST00000453536 CCDC174Q6PII3 467 aa16.69■□□□□ 0.26
RFTN1-207ENST00000453536 TRMT44Q8IYL2 757 aaKnown RBP16.69■□□□□ 0.26
RFTN1-207ENST00000453536 CPVLQ9H3G5 476 aa16.69■□□□□ 0.26
RFTN1-207ENST00000453536 SLC38A10Q9HBR0 1119 aa16.69■□□□□ 0.26
RFTN1-207ENST00000453536 ORC4O43929 436 aa16.68■□□□□ 0.26
RFTN1-207ENST00000453536 FGRP09769 529 aa16.68■□□□□ 0.26
RFTN1-207ENST00000453536 RCSD1Q6JBY9 416 aa16.68■□□□□ 0.26
RFTN1-207ENST00000453536 ANKLE1Q8NAG6 615 aa16.68■□□□□ 0.26
RFTN1-207ENST00000453536 PRPF38AQ8NAV1 312 aaKnown RBP16.68■□□□□ 0.26
RFTN1-207ENST00000453536 SENP6Q9GZR1 1112 aaPredicted RBP16.68■□□□□ 0.26
RFTN1-207ENST00000453536 TAF6LQ9Y6J9 622 aa16.68■□□□□ 0.26
RFTN1-207ENST00000453536 LAMA2P24043 3122 aaKnown RBP16.68■□□□□ 0.26
RFTN1-207ENST00000453536 ASTN1O14525 1302 aa16.68■□□□□ 0.26
RFTN1-207ENST00000453536 SOX1O00570 391 aaPredicted RBP16.67■□□□□ 0.26
RFTN1-207ENST00000453536 STRNO43815 780 aa16.67■□□□□ 0.26
RFTN1-207ENST00000453536 SLC25A27O95847 323 aa16.67■□□□□ 0.26
RFTN1-207ENST00000453536 SLC3A2P08195 630 aaKnown RBP16.67■□□□□ 0.26
RFTN1-207ENST00000453536 SLC1A4P43007 532 aa16.67■□□□□ 0.26
RFTN1-207ENST00000453536 CNTN2Q02246 1040 aa16.67■□□□□ 0.26
RFTN1-207ENST00000453536 MUM1L1Q5H9M0 696 aa16.67■□□□□ 0.26
RFTN1-207ENST00000453536 TMEM47Q9BQJ4 181 aa16.67■□□□□ 0.26
RFTN1-207ENST00000453536 TEX13BQ9BXU2 312 aa16.67■□□□□ 0.26
RFTN1-207ENST00000453536 MYH6P13533 1939 aa16.66■□□□□ 0.26
RFTN1-207ENST00000453536 RBAK-RBAKDNI3L0D1 243 aa16.66■□□□□ 0.26
RFTN1-207ENST00000453536 SNAI1O95863 264 aaPredicted RBP16.66■□□□□ 0.26
RFTN1-207ENST00000453536 ZNF865P0CJ78 1059 aaPredicted RBP16.66■□□□□ 0.26
RFTN1-207ENST00000453536 NOVP48745 357 aa16.66■□□□□ 0.26
RFTN1-207ENST00000453536 IKQ13123 557 aaPredicted RBP16.66■□□□□ 0.26
RFTN1-207ENST00000453536 AAMPQ13685 434 aa16.66■□□□□ 0.26
RFTN1-207ENST00000453536 KCTD2Q14681 263 aa16.66■□□□□ 0.26
RFTN1-207ENST00000453536 CCDC96Q2M329 555 aa16.66■□□□□ 0.26
RFTN1-207ENST00000453536 TTC22Q5TAA0 569 aa16.66■□□□□ 0.26
RFTN1-207ENST00000453536 ABRAQ8N0Z2 381 aa16.66■□□□□ 0.26
RFTN1-207ENST00000453536 FERMT2Q96AC1 680 aa16.66■□□□□ 0.26
RFTN1-207ENST00000453536 ZNF287Q9HBT7 754 aa16.66■□□□□ 0.26
RFTN1-207ENST00000453536 GPCPD1Q9NPB8 672 aa16.66■□□□□ 0.26
RFTN1-207ENST00000453536 DIAPH3Q9NSV4 1193 aa16.66■□□□□ 0.26
RFTN1-207ENST00000453536 FEM1BQ9UK73 627 aa16.66■□□□□ 0.26
RFTN1-207ENST00000453536 PRR12Q9ULL5 1215 aa16.66■□□□□ 0.26
RFTN1-207ENST00000453536 DNAJC25-GNG10A0A024R161 153 aa16.65■□□□□ 0.26
RFTN1-207ENST00000453536 MYADML2A6NDP7 307 aa16.65■□□□□ 0.26
RFTN1-207ENST00000453536 PGK1P00558 417 aa16.65■□□□□ 0.26
RFTN1-207ENST00000453536 TMEM63BQ5T3F8 832 aa16.65■□□□□ 0.26
RFTN1-207ENST00000453536 GMCL1Q96IK5 515 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms