RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 NLRC4Q9NPP4 1024 aa12.55□□□□□ -0.4
DDR1-239ENST00000452441 EXOC1Q9NV70 894 aa12.55□□□□□ -0.4
DDR1-239ENST00000452441 NARFQ9UHQ1 456 aa12.55□□□□□ -0.4
DDR1-239ENST00000452441 PARP1P09874 1014 aaKnown RBP12.55□□□□□ -0.4
DDR1-239ENST00000452441 SNAP25P60880 206 aa12.55□□□□□ -0.4
DDR1-239ENST00000452441 PLS1Q14651 629 aa12.55□□□□□ -0.4
DDR1-239ENST00000452441 PARP3Q9Y6F1 533 aa12.55□□□□□ -0.4
DDR1-239ENST00000452441 NUP188Q5SRE5 1749 aa12.55□□□□□ -0.4
DDR1-239ENST00000452441 CCDC66A2RUB6 948 aa12.55□□□□□ -0.4
DDR1-239ENST00000452441 SRGAP2O75044 1071 aa12.55□□□□□ -0.4
DDR1-239ENST00000452441 TOB1P50616 345 aaPredicted RBP12.55□□□□□ -0.4
DDR1-239ENST00000452441 CSGALNACT2Q8N6G5 542 aa12.55□□□□□ -0.4
DDR1-239ENST00000452441 NWD2Q9ULI1 1742 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 CTAGE9A4FU28 777 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 SP4Q02446 784 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 RESP18Q5W5W9 173 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 FAM107BQ9H098 131 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 DCP1AQ9NPI6 582 aaPredicted RBP12.54□□□□□ -0.4
DDR1-239ENST00000452441 LUC7L2Q9Y383 392 aaKnown RBP12.54□□□□□ -0.4
DDR1-239ENST00000452441 AFF2P51816 1311 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 MYH15Q9Y2K3 1946 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 SLURP2P0DP57 97 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 CXCR5P32302 372 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 PAK1Q13153 545 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 CTR9Q6PD62 1173 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 SLC35F6Q8N357 371 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 COA7Q96BR5 231 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 PAGE5Q96GU1 130 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 KLRF2D3W0D1 207 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 PNMA6AP0CW24 399 aaPredicted RBP12.54□□□□□ -0.4
DDR1-239ENST00000452441 LIFRP42702 1097 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 VSTM4Q8IW00 320 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 SLF2Q8IX21 1173 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 RGS22Q8NE09 1264 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 BMP2KQ9NSY1 1161 aaPredicted RBP12.54□□□□□ -0.4
DDR1-239ENST00000452441 RBM28Q9NW13 759 aaKnown RBP12.54□□□□□ -0.4
DDR1-239ENST00000452441 TRIM10Q9UDY6 481 aa12.54□□□□□ -0.4
DDR1-239ENST00000452441 LAMB4A4D0S4 1761 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 PPP6R2O75170 966 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 HLA-DOAP06340 250 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 SCG2P13521 617 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 SPA17Q15506 151 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 CCDC40Q4G0X9 1142 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 NCAPH2Q6IBW4 605 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 CLEC4GQ6UXB4 293 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 RRP36Q96EU6 259 aaKnown RBP12.53□□□□□ -0.4
DDR1-239ENST00000452441 HSD3B7Q9H2F3 369 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 TMOD2Q9NZR1 351 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 THRAP3Q9Y2W1 955 aaKnown RBP12.53□□□□□ -0.4
DDR1-239ENST00000452441 CLRN2A0PK11 232 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 WNT7AO00755 349 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 H2AFXP16104 143 aaPredicted RBP12.53□□□□□ -0.4
DDR1-239ENST00000452441 SRBD1Q8N5C6 995 aaKnown RBP12.53□□□□□ -0.4
DDR1-239ENST00000452441 RUFY1Q96T51 708 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 SUGCTQ9HAC7 445 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 USP40Q9NVE5 1235 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 ZBTB21Q9ULJ3 1066 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 B4DLN1 442 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 PSMA7O14818 248 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 PTPREP23469 700 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 TBC1D10BQ4KMP7 808 aaPredicted RBP12.53□□□□□ -0.4
DDR1-239ENST00000452441 WDR78Q5VTH9 848 aa12.53□□□□□ -0.4
DDR1-239ENST00000452441 BCL9O00512 1426 aa12.52□□□□□ -0.4
DDR1-239ENST00000452441 CTAGE15A4D2H0 777 aa12.52□□□□□ -0.4
DDR1-239ENST00000452441 CTAGE8P0CG41 777 aa12.52□□□□□ -0.4
DDR1-239ENST00000452441 CALML3P27482 149 aa12.52□□□□□ -0.4
DDR1-239ENST00000452441 OAS2P29728 719 aaKnown RBP12.52□□□□□ -0.4
DDR1-239ENST00000452441 MAEAQ7L5Y9 396 aa12.52□□□□□ -0.4
DDR1-239ENST00000452441 CTAGE6Q86UF2 777 aa12.52□□□□□ -0.4
DDR1-239ENST00000452441 CTAGE4Q8IX94 777 aa12.52□□□□□ -0.4
DDR1-239ENST00000452441 GOLGA1Q92805 767 aa12.52□□□□□ -0.4
DDR1-239ENST00000452441 TIGD1Q96MW7 591 aa12.52□□□□□ -0.4
DDR1-239ENST00000452441 FAM217BQ9NTX9 383 aaPredicted RBP12.52□□□□□ -0.4
DDR1-239ENST00000452441 TUBE1Q9UJT0 475 aa12.52□□□□□ -0.4
DDR1-239ENST00000452441 SPATA31A5Q5VU36 1347 aa12.52□□□□□ -0.4
DDR1-239ENST00000452441 SPATA31A7Q8IWB4 1347 aa12.52□□□□□ -0.4
DDR1-239ENST00000452441 SMCO2A6NFE2 343 aa12.52□□□□□ -0.41
DDR1-239ENST00000452441 VGLL3A8MV65 326 aa12.52□□□□□ -0.41
DDR1-239ENST00000452441 KCNJ18B7U540 433 aa12.52□□□□□ -0.41
DDR1-239ENST00000452441 MORC3Q14149 939 aa12.52□□□□□ -0.41
DDR1-239ENST00000452441 KCNJ12Q14500 433 aa12.52□□□□□ -0.41
DDR1-239ENST00000452441 CCDC93Q567U6 631 aa12.52□□□□□ -0.41
DDR1-239ENST00000452441 STAG1Q8WVM7 1258 aa12.52□□□□□ -0.41
DDR1-239ENST00000452441 NOC4LQ9BVI4 516 aaKnown RBP12.52□□□□□ -0.41
DDR1-239ENST00000452441 ARPP21Q9UBL0 812 aaPredicted RBP12.52□□□□□ -0.41
DDR1-239ENST00000452441 HDAC6Q9UBN7 1215 aa12.52□□□□□ -0.41
DDR1-239ENST00000452441 DCCP43146 1447 aa12.52□□□□□ -0.41
DDR1-239ENST00000452441 HSPA1LP34931 641 aa12.52□□□□□ -0.41
DDR1-239ENST00000452441 PTPAQ15257 358 aa12.52□□□□□ -0.41
DDR1-239ENST00000452441 TYW1BQ6NUM6 668 aa12.52□□□□□ -0.41
DDR1-239ENST00000452441 BLIDQ8IZY5 108 aa12.52□□□□□ -0.41
DDR1-239ENST00000452441 CALML4Q96GE6 196 aa12.52□□□□□ -0.41
DDR1-239ENST00000452441 KCND1Q9NSA2 647 aa12.52□□□□□ -0.41
DDR1-239ENST00000452441 FHOD1Q9Y613 1164 aa12.52□□□□□ -0.41
DDR1-239ENST00000452441 BMP6P22004 513 aa12.51□□□□□ -0.41
DDR1-239ENST00000452441 NOP2P46087 812 aaKnown RBP12.51□□□□□ -0.41
DDR1-239ENST00000452441 GNAQP50148 359 aa12.51□□□□□ -0.41
DDR1-239ENST00000452441 TTC19Q6DKK2 380 aaPredicted RBP12.51□□□□□ -0.41
DDR1-239ENST00000452441 TRIM65Q6PJ69 517 aa12.51□□□□□ -0.41
DDR1-239ENST00000452441 REXO1L1PQ8IX06 675 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms