RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 FLRT1Q9NZU1 646 aa18.98■□□□□ 0.63
SGCE-208ENST00000450385 DDX20Q9UHI6 824 aaKnown RBP18.98■□□□□ 0.63
SGCE-208ENST00000450385 CCDC171Q6TFL3 1326 aa18.98■□□□□ 0.63
SGCE-208ENST00000450385 PLXNA1Q9UIW2 1896 aa18.97■□□□□ 0.63
SGCE-208ENST00000450385 COBLO75128 1261 aa18.97■□□□□ 0.63
SGCE-208ENST00000450385 CCND3P30281 292 aaPredicted RBP18.97■□□□□ 0.63
SGCE-208ENST00000450385 STAT2P52630 851 aa18.97■□□□□ 0.63
SGCE-208ENST00000450385 FAM47AQ5JRC9 791 aa18.97■□□□□ 0.63
SGCE-208ENST00000450385 HABP4Q5JVS0 413 aaKnown RBP18.97■□□□□ 0.63
SGCE-208ENST00000450385 ARRDC4Q8NCT1 418 aa18.97■□□□□ 0.63
SGCE-208ENST00000450385 MAML3Q96JK9 1138 aa18.97■□□□□ 0.63
SGCE-208ENST00000450385 FAM227BQ96M60 508 aa18.97■□□□□ 0.63
SGCE-208ENST00000450385 TTC14Q96N46 770 aa18.97■□□□□ 0.63
SGCE-208ENST00000450385 RNF41Q9H4P4 317 aaPredicted RBP18.97■□□□□ 0.63
SGCE-208ENST00000450385 DNAH12Q6ZR08 3092 aa18.97■□□□□ 0.63
SGCE-208ENST00000450385 A0A0D9SFI3 127 aa18.96■□□□□ 0.63
SGCE-208ENST00000450385 SEPT4O43236 478 aa18.96■□□□□ 0.63
SGCE-208ENST00000450385 COL6A1P12109 1028 aa18.96■□□□□ 0.63
SGCE-208ENST00000450385 CYBAP13498 195 aa18.96■□□□□ 0.63
SGCE-208ENST00000450385 MNX1P50219 401 aaPredicted RBP18.96■□□□□ 0.63
SGCE-208ENST00000450385 VPS53Q5VIR6 699 aa18.96■□□□□ 0.63
SGCE-208ENST00000450385 CHST13Q8NET6 341 aa18.96■□□□□ 0.63
SGCE-208ENST00000450385 STAG1Q8WVM7 1258 aa18.96■□□□□ 0.63
SGCE-208ENST00000450385 FRMPD3Q5JV73 1810 aa18.95■□□□□ 0.62
SGCE-208ENST00000450385 A0A1W2PPC1 479 aa18.95■□□□□ 0.62
SGCE-208ENST00000450385 RANBP6O60518 1105 aaKnown RBP18.95■□□□□ 0.62
SGCE-208ENST00000450385 CYP2C19P33261 490 aa18.95■□□□□ 0.62
SGCE-208ENST00000450385 SLC1A4P43007 532 aa18.95■□□□□ 0.62
SGCE-208ENST00000450385 NMIQ13287 307 aaPredicted RBP18.95■□□□□ 0.62
SGCE-208ENST00000450385 ZNF792Q3KQV3 632 aa18.95■□□□□ 0.62
SGCE-208ENST00000450385 CCDC178Q5BJE1 867 aa18.95■□□□□ 0.62
SGCE-208ENST00000450385 SAMD1Q6SPF0 538 aaPredicted RBP18.95■□□□□ 0.62
SGCE-208ENST00000450385 ZNF467Q7Z7K2 595 aaPredicted RBP18.95■□□□□ 0.62
SGCE-208ENST00000450385 STX8Q9UNK0 236 aa18.95■□□□□ 0.62
SGCE-208ENST00000450385 CNGA1P29973 690 aa18.94■□□□□ 0.62
SGCE-208ENST00000450385 CTDSPL2Q05D32 466 aa18.94■□□□□ 0.62
SGCE-208ENST00000450385 TKFCQ3LXA3 575 aa18.94■□□□□ 0.62
SGCE-208ENST00000450385 AKNAD1Q5T1N1 836 aa18.94■□□□□ 0.62
SGCE-208ENST00000450385 SNRNP48Q6IEG0 339 aaKnown RBP18.94■□□□□ 0.62
SGCE-208ENST00000450385 MFSD6Q6ZSS7 791 aa18.94■□□□□ 0.62
SGCE-208ENST00000450385 KIFC2Q96AC6 838 aa18.94■□□□□ 0.62
SGCE-208ENST00000450385 NUP88Q99567 741 aaPredicted RBP18.94■□□□□ 0.62
SGCE-208ENST00000450385 TINF2Q9BSI4 451 aa18.94■□□□□ 0.62
SGCE-208ENST00000450385 IL17RBQ9NRM6 502 aa18.94■□□□□ 0.62
SGCE-208ENST00000450385 DIAPH3Q9NSV4 1193 aa18.94■□□□□ 0.62
SGCE-208ENST00000450385 PNMA2Q9UL42 364 aa18.94■□□□□ 0.62
SGCE-208ENST00000450385 SMCHD1A6NHR9 2005 aa18.94■□□□□ 0.62
SGCE-208ENST00000450385 DNM1LO00429 736 aa18.93■□□□□ 0.62
SGCE-208ENST00000450385 MAMDC4Q6UXC1 1216 aa18.93■□□□□ 0.62
SGCE-208ENST00000450385 DIS3LQ8TF46 1054 aaKnown RBP18.93■□□□□ 0.62
SGCE-208ENST00000450385 DCAF4Q8WV16 495 aa18.93■□□□□ 0.62
SGCE-208ENST00000450385 DDX11Q96FC9 970 aa18.93■□□□□ 0.62
SGCE-208ENST00000450385 CTNNA3Q9UI47 895 aa18.93■□□□□ 0.62
SGCE-208ENST00000450385 COLQQ9Y215 455 aaPredicted RBP18.93■□□□□ 0.62
SGCE-208ENST00000450385 ALPK3Q96L96 1907 aa18.93■□□□□ 0.62
SGCE-208ENST00000450385 SYNGAP1Q96PV0 1343 aa18.93■□□□□ 0.62
SGCE-208ENST00000450385 RANBP2P49792 3224 aaKnown RBP18.93■□□□□ 0.62
SGCE-208ENST00000450385 DNAJC25-GNG10A0A024R161 153 aa18.92■□□□□ 0.62
SGCE-208ENST00000450385 TMEM232C9JQI7 657 aa18.92■□□□□ 0.62
SGCE-208ENST00000450385 ZNF213O14771 459 aa18.92■□□□□ 0.62
SGCE-208ENST00000450385 TOP1P11387 765 aaKnown RBP18.92■□□□□ 0.62
SGCE-208ENST00000450385 ZNF589Q86UQ0 364 aaPredicted RBP18.92■□□□□ 0.62
SGCE-208ENST00000450385 LRRC47Q8N1G4 583 aaKnown RBP18.92■□□□□ 0.62
SGCE-208ENST00000450385 DSCC1Q9BVC3 393 aa18.92■□□□□ 0.62
SGCE-208ENST00000450385 PCDH10Q9P2E7 1040 aa18.92■□□□□ 0.62
SGCE-208ENST00000450385 MCCP23508 829 aa18.91■□□□□ 0.62
SGCE-208ENST00000450385 TRPV1Q8NER1 839 aa18.91■□□□□ 0.62
SGCE-208ENST00000450385 ESR2Q92731 530 aa18.91■□□□□ 0.62
SGCE-208ENST00000450385 BMP8BP34820 402 aa18.9■□□□□ 0.62
SGCE-208ENST00000450385 CWC27Q6UX04 472 aaKnown RBP18.9■□□□□ 0.62
SGCE-208ENST00000450385 BTNL9Q6UXG8 535 aa18.9■□□□□ 0.62
SGCE-208ENST00000450385 CPXCR1Q8N123 301 aa18.9■□□□□ 0.62
SGCE-208ENST00000450385 PRO3102Q9H379 93 aa18.9■□□□□ 0.62
SGCE-208ENST00000450385 TOMM22Q9NS69 142 aa18.9■□□□□ 0.62
SGCE-208ENST00000450385 CNPY2Q9Y2B0 182 aa18.9■□□□□ 0.62
SGCE-208ENST00000450385 PFASO15067 1338 aa18.9■□□□□ 0.62
SGCE-208ENST00000450385 KBTBD13C9JR72 458 aa18.89■□□□□ 0.61
SGCE-208ENST00000450385 IKQ13123 557 aaPredicted RBP18.89■□□□□ 0.61
SGCE-208ENST00000450385 DGKHQ86XP1 1220 aa18.89■□□□□ 0.61
SGCE-208ENST00000450385 ANKRD35Q8N283 1001 aa18.89■□□□□ 0.61
SGCE-208ENST00000450385 RUFY2Q8WXA3 655 aa18.89■□□□□ 0.61
SGCE-208ENST00000450385 MAF1Q9H063 256 aa18.89■□□□□ 0.61
SGCE-208ENST00000450385 INCENPQ9NQS7 918 aa18.89■□□□□ 0.61
SGCE-208ENST00000450385 RIPK3Q9Y572 518 aa18.89■□□□□ 0.61
SGCE-208ENST00000450385 LAMA4Q16363 1823 aa18.88■□□□□ 0.61
SGCE-208ENST00000450385 PGK2P07205 417 aa18.88■□□□□ 0.61
SGCE-208ENST00000450385 RARBP10826 455 aa18.88■□□□□ 0.61
SGCE-208ENST00000450385 IMMTQ16891 758 aaKnown RBP18.88■□□□□ 0.61
SGCE-208ENST00000450385 IQCA1Q86XH1 822 aa18.88■□□□□ 0.61
SGCE-208ENST00000450385 TMEM47Q9BQJ4 181 aa18.88■□□□□ 0.61
SGCE-208ENST00000450385 ACAD9Q9H845 621 aa18.88■□□□□ 0.61
SGCE-208ENST00000450385 RAVER2Q9HCJ3 691 aaKnown RBP18.88■□□□□ 0.61
SGCE-208ENST00000450385 LOC102724159A0A0B4J2E5 919 aa18.87■□□□□ 0.61
SGCE-208ENST00000450385 AKR1A1P14550 325 aa18.87■□□□□ 0.61
SGCE-208ENST00000450385 PWP2Q15269 919 aaKnown RBP18.87■□□□□ 0.61
SGCE-208ENST00000450385 RRP12Q5JTH9 1297 aaKnown RBP18.87■□□□□ 0.61
SGCE-208ENST00000450385 C1orf53Q5VUE5 145 aa18.87■□□□□ 0.61
SGCE-208ENST00000450385 CHRDL2Q6WN34 429 aa18.87■□□□□ 0.61
SGCE-208ENST00000450385 RAD50Q92878 1312 aa18.87■□□□□ 0.61
SGCE-208ENST00000450385 SENP6Q9GZR1 1112 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms