RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 SMAD3P84022 425 aaKnown RBP20.85■□□□□ 0.93
FAM3A-216ENST00000449971 TLE2Q04725 743 aa20.85■□□□□ 0.93
FAM3A-216ENST00000449971 FAM227BQ96M60 508 aa20.85■□□□□ 0.93
FAM3A-216ENST00000449971 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.85■□□□□ 0.93
FAM3A-216ENST00000449971 OSBPL3Q9H4L5 887 aa20.85■□□□□ 0.93
FAM3A-216ENST00000449971 VCPKMTQ9H867 229 aa20.85■□□□□ 0.93
FAM3A-216ENST00000449971 HOXC10Q9NYD6 342 aa20.85■□□□□ 0.93
FAM3A-216ENST00000449971 ROBO3Q96MS0 1386 aa20.85■□□□□ 0.93
FAM3A-216ENST00000449971 STRNO43815 780 aa20.84■□□□□ 0.93
FAM3A-216ENST00000449971 MCMDC2Q4G0Z9 681 aa20.84■□□□□ 0.93
FAM3A-216ENST00000449971 PRDM6Q9NQX0 595 aa20.84■□□□□ 0.93
FAM3A-216ENST00000449971 SLC5A4Q9NY91 659 aa20.84■□□□□ 0.93
FAM3A-216ENST00000449971 PQBP1O60828 265 aaKnown RBP20.83■□□□□ 0.93
FAM3A-216ENST00000449971 PDE4BQ07343 736 aa20.83■□□□□ 0.93
FAM3A-216ENST00000449971 PPARAQ07869 468 aa20.83■□□□□ 0.93
FAM3A-216ENST00000449971 NMIQ13287 307 aaPredicted RBP20.83■□□□□ 0.93
FAM3A-216ENST00000449971 TICAM2Q86XR7 235 aa20.83■□□□□ 0.93
FAM3A-216ENST00000449971 A0A0D9SFI3 127 aa20.82■□□□□ 0.92
FAM3A-216ENST00000449971 FLOT1O75955 427 aa20.82■□□□□ 0.92
FAM3A-216ENST00000449971 PGK1P00558 417 aa20.82■□□□□ 0.92
FAM3A-216ENST00000449971 IGHA2P01877 340 aa20.82■□□□□ 0.92
FAM3A-216ENST00000449971 ITGB8P26012 769 aa20.82■□□□□ 0.92
FAM3A-216ENST00000449971 EPHB4P54760 987 aa20.82■□□□□ 0.92
FAM3A-216ENST00000449971 SNX17Q15036 470 aa20.82■□□□□ 0.92
FAM3A-216ENST00000449971 VPS53Q5VIR6 699 aa20.82■□□□□ 0.92
FAM3A-216ENST00000449971 ATG4CQ96DT6 458 aa20.82■□□□□ 0.92
FAM3A-216ENST00000449971 GOPCQ9HD26 462 aa20.82■□□□□ 0.92
FAM3A-216ENST00000449971 XPNPEP3Q9NQH7 507 aa20.82■□□□□ 0.92
FAM3A-216ENST00000449971 FOXP2O15409 715 aa20.81■□□□□ 0.92
FAM3A-216ENST00000449971 SDSP20132 328 aa20.81■□□□□ 0.92
FAM3A-216ENST00000449971 SHCBP1Q8NEM2 672 aa20.81■□□□□ 0.92
FAM3A-216ENST00000449971 MAML3Q96JK9 1138 aa20.81■□□□□ 0.92
FAM3A-216ENST00000449971 NYAP2Q9P242 653 aa20.81■□□□□ 0.92
FAM3A-216ENST00000449971 CLIP2Q9UDT6 1046 aa20.81■□□□□ 0.92
FAM3A-216ENST00000449971 TTC28Q96AY4 2481 aa20.81■□□□□ 0.92
FAM3A-216ENST00000449971 WDR46O15213 610 aaKnown RBP20.8■□□□□ 0.92
FAM3A-216ENST00000449971 CLTBP09497 229 aa20.8■□□□□ 0.92
FAM3A-216ENST00000449971 RARBP10826 455 aa20.8■□□□□ 0.92
FAM3A-216ENST00000449971 FCER1AP12319 257 aa20.8■□□□□ 0.92
FAM3A-216ENST00000449971 RAG1P15918 1043 aa20.8■□□□□ 0.92
FAM3A-216ENST00000449971 DSG3P32926 999 aa20.8■□□□□ 0.92
FAM3A-216ENST00000449971 CTDSPL2Q05D32 466 aa20.8■□□□□ 0.92
FAM3A-216ENST00000449971 LENG1Q96BZ8 264 aaPredicted RBP20.8■□□□□ 0.92
FAM3A-216ENST00000449971 TACC3Q9Y6A5 838 aa20.8■□□□□ 0.92
FAM3A-216ENST00000449971 SMCHD1A6NHR9 2005 aa20.79■□□□□ 0.92
FAM3A-216ENST00000449971 PGK2P07205 417 aa20.79■□□□□ 0.92
FAM3A-216ENST00000449971 TSPY3P0CV98 308 aa20.79■□□□□ 0.92
FAM3A-216ENST00000449971 TSPY8P0CW00 308 aa20.79■□□□□ 0.92
FAM3A-216ENST00000449971 TFAP4Q01664 338 aa20.79■□□□□ 0.92
FAM3A-216ENST00000449971 ALX1Q15699 326 aa20.79■□□□□ 0.92
FAM3A-216ENST00000449971 USP38Q8NB14 1042 aa20.79■□□□□ 0.92
FAM3A-216ENST00000449971 PPM1EQ8WY54 764 aa20.79■□□□□ 0.92
FAM3A-216ENST00000449971 SYMPKQ92797 1274 aaKnown RBP20.79■□□□□ 0.92
FAM3A-216ENST00000449971 MROH8Q9H579 483 aa20.79■□□□□ 0.92
FAM3A-216ENST00000449971 TMEM39AQ9NV64 488 aa20.79■□□□□ 0.92
FAM3A-216ENST00000449971 IGKV6D-41A0A0C4DH26 115 aa20.78■□□□□ 0.92
FAM3A-216ENST00000449971 GRIN2CQ14957 1233 aa20.78■□□□□ 0.92
FAM3A-216ENST00000449971 FAM83BQ5T0W9 1011 aa20.78■□□□□ 0.92
FAM3A-216ENST00000449971 RNF180Q86T96 592 aa20.78■□□□□ 0.92
FAM3A-216ENST00000449971 ZNF589Q86UQ0 364 aaPredicted RBP20.78■□□□□ 0.92
FAM3A-216ENST00000449971 MB21D1Q8N884 522 aa20.78■□□□□ 0.92
FAM3A-216ENST00000449971 NEDD1Q8NHV4 660 aa20.78■□□□□ 0.92
FAM3A-216ENST00000449971 MMP19Q99542 508 aa20.78■□□□□ 0.92
FAM3A-216ENST00000449971 INCENPQ9NQS7 918 aa20.78■□□□□ 0.92
FAM3A-216ENST00000449971 DIAPH3Q9NSV4 1193 aa20.78■□□□□ 0.92
FAM3A-216ENST00000449971 F5H6K3 240 aa20.77■□□□□ 0.92
FAM3A-216ENST00000449971 FGAP02671 866 aa20.77■□□□□ 0.92
FAM3A-216ENST00000449971 HSPD1P10809 573 aaKnown RBP20.77■□□□□ 0.92
FAM3A-216ENST00000449971 TAL1P17542 331 aaPredicted RBP20.77■□□□□ 0.92
FAM3A-216ENST00000449971 PDE4AP27815 886 aa20.77■□□□□ 0.92
FAM3A-216ENST00000449971 FPGSQ05932 587 aa20.77■□□□□ 0.92
FAM3A-216ENST00000449971 KLRC3Q07444 240 aa20.77■□□□□ 0.92
FAM3A-216ENST00000449971 CEP95Q96GE4 821 aa20.77■□□□□ 0.92
FAM3A-216ENST00000449971 MTMR4Q9NYA4 1195 aa20.77■□□□□ 0.92
FAM3A-216ENST00000449971 PHF24Q9UPV7 400 aa20.77■□□□□ 0.92
FAM3A-216ENST00000449971 CCDC171Q6TFL3 1326 aa20.77■□□□□ 0.91
FAM3A-216ENST00000449971 ZNF236Q9UL36 1845 aa20.76■□□□□ 0.91
FAM3A-216ENST00000449971 A0A1W2PQ45 241 aaPredicted RBP20.76■□□□□ 0.91
FAM3A-216ENST00000449971 A0A1W2PQY0 241 aa20.76■□□□□ 0.91
FAM3A-216ENST00000449971 DNAJB2P25686 324 aa20.76■□□□□ 0.91
FAM3A-216ENST00000449971 MFAP1P55081 439 aaKnown RBP20.76■□□□□ 0.91
FAM3A-216ENST00000449971 TMEM132BQ14DG7 1078 aa20.76■□□□□ 0.91
FAM3A-216ENST00000449971 CWC27Q6UX04 472 aaKnown RBP20.76■□□□□ 0.91
FAM3A-216ENST00000449971 NUP88Q99567 741 aaPredicted RBP20.76■□□□□ 0.91
FAM3A-216ENST00000449971 FBXO28Q9NVF7 368 aa20.76■□□□□ 0.91
FAM3A-216ENST00000449971 ANAPC4Q9UJX5 808 aa20.76■□□□□ 0.91
FAM3A-216ENST00000449971 MYH8P13535 1937 aa20.76■□□□□ 0.91
FAM3A-216ENST00000449971 TSPY2A6NKD2 308 aa20.75■□□□□ 0.91
FAM3A-216ENST00000449971 HIP1O00291 1037 aa20.75■□□□□ 0.91
FAM3A-216ENST00000449971 TTLL1O95922 423 aa20.75■□□□□ 0.91
FAM3A-216ENST00000449971 NDUFB10O96000 172 aa20.75■□□□□ 0.91
FAM3A-216ENST00000449971 C1orf53Q5VUE5 145 aa20.75■□□□□ 0.91
FAM3A-216ENST00000449971 ABRAQ8N0Z2 381 aa20.75■□□□□ 0.91
FAM3A-216ENST00000449971 MKL1Q969V6 931 aa20.75■□□□□ 0.91
FAM3A-216ENST00000449971 TOMM22Q9NS69 142 aa20.75■□□□□ 0.91
FAM3A-216ENST00000449971 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.75■□□□□ 0.91
FAM3A-216ENST00000449971 RANBP6O60518 1105 aaKnown RBP20.74■□□□□ 0.91
FAM3A-216ENST00000449971 TJAP1Q5JTD0 557 aa20.74■□□□□ 0.91
FAM3A-216ENST00000449971 MUC3AQ02505 3323 aa20.74■□□□□ 0.91
FAM3A-216ENST00000449971 MYO9BQ13459 2157 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms