RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 FDX1P10109 184 aa20.55■□□□□ 0.88
CLTCL1-203ENST00000449918 HSPD1P10809 573 aaKnown RBP20.55■□□□□ 0.88
CLTCL1-203ENST00000449918 COL6A1P12109 1028 aa20.55■□□□□ 0.88
CLTCL1-203ENST00000449918 SDSP20132 328 aa20.55■□□□□ 0.88
CLTCL1-203ENST00000449918 C7orf61Q8IZ16 206 aa20.55■□□□□ 0.88
CLTCL1-203ENST00000449918 CPXCR1Q8N123 301 aa20.55■□□□□ 0.88
CLTCL1-203ENST00000449918 CHURC1Q8WUH1 139 aa20.55■□□□□ 0.88
CLTCL1-203ENST00000449918 GMCL1Q96IK5 515 aa20.55■□□□□ 0.88
CLTCL1-203ENST00000449918 SLC38A10Q9HBR0 1119 aa20.55■□□□□ 0.88
CLTCL1-203ENST00000449918 INCENPQ9NQS7 918 aa20.55■□□□□ 0.88
CLTCL1-203ENST00000449918 ISY1Q9ULR0 285 aaKnown RBP20.55■□□□□ 0.88
CLTCL1-203ENST00000449918 CCDC171Q6TFL3 1326 aa20.54■□□□□ 0.88
CLTCL1-203ENST00000449918 SEPT4O43236 478 aa20.54■□□□□ 0.88
CLTCL1-203ENST00000449918 PGK2P07205 417 aa20.54■□□□□ 0.88
CLTCL1-203ENST00000449918 FGRP09769 529 aa20.54■□□□□ 0.88
CLTCL1-203ENST00000449918 SLC1A4P43007 532 aa20.54■□□□□ 0.88
CLTCL1-203ENST00000449918 SLC4A3P48751 1232 aa20.54■□□□□ 0.88
CLTCL1-203ENST00000449918 OAZ1P54368 228 aa20.54■□□□□ 0.88
CLTCL1-203ENST00000449918 ZNF792Q3KQV3 632 aa20.54■□□□□ 0.88
CLTCL1-203ENST00000449918 FAM160B2Q86V87 743 aa20.54■□□□□ 0.88
CLTCL1-203ENST00000449918 ARRDC4Q8NCT1 418 aa20.54■□□□□ 0.88
CLTCL1-203ENST00000449918 DDX11Q96FC9 970 aa20.54■□□□□ 0.88
CLTCL1-203ENST00000449918 IL17RBQ9NRM6 502 aa20.54■□□□□ 0.88
CLTCL1-203ENST00000449918 TOMM22Q9NS69 142 aa20.54■□□□□ 0.88
CLTCL1-203ENST00000449918 RBM27Q9P2N5 1060 aaKnown RBP20.54■□□□□ 0.88
CLTCL1-203ENST00000449918 NRBP1Q9UHY1 535 aa20.54■□□□□ 0.88
CLTCL1-203ENST00000449918 PFASO15067 1338 aa20.53■□□□□ 0.88
CLTCL1-203ENST00000449918 CEP290O15078 2479 aa20.53■□□□□ 0.88
CLTCL1-203ENST00000449918 TMEM232C9JQI7 657 aa20.53■□□□□ 0.88
CLTCL1-203ENST00000449918 DNM1LO00429 736 aa20.53■□□□□ 0.88
CLTCL1-203ENST00000449918 MCCP23508 829 aa20.53■□□□□ 0.88
CLTCL1-203ENST00000449918 STAT2P52630 851 aa20.53■□□□□ 0.88
CLTCL1-203ENST00000449918 ZNF589Q86UQ0 364 aaPredicted RBP20.53■□□□□ 0.88
CLTCL1-203ENST00000449918 STAG1Q8WVM7 1258 aa20.53■□□□□ 0.88
CLTCL1-203ENST00000449918 RAVER2Q9HCJ3 691 aaKnown RBP20.53■□□□□ 0.88
CLTCL1-203ENST00000449918 RIPK3Q9Y572 518 aa20.53■□□□□ 0.88
CLTCL1-203ENST00000449918 PARP14Q460N5 1801 aa20.53■□□□□ 0.88
CLTCL1-203ENST00000449918 ZMYM6O95789 1325 aa20.53■□□□□ 0.88
CLTCL1-203ENST00000449918 HIP1O00291 1037 aa20.52■□□□□ 0.88
CLTCL1-203ENST00000449918 PCP11498 1178 aaKnown RBP20.52■□□□□ 0.88
CLTCL1-203ENST00000449918 IKQ13123 557 aaPredicted RBP20.52■□□□□ 0.88
CLTCL1-203ENST00000449918 RRP12Q5JTH9 1297 aaKnown RBP20.52■□□□□ 0.88
CLTCL1-203ENST00000449918 PRAMEF19Q5SWL8 479 aa20.52■□□□□ 0.88
CLTCL1-203ENST00000449918 TINF2Q9BSI4 451 aa20.52■□□□□ 0.88
CLTCL1-203ENST00000449918 DIAPH3Q9NSV4 1193 aa20.52■□□□□ 0.88
CLTCL1-203ENST00000449918 FBXO40Q9UH90 709 aa20.52■□□□□ 0.88
CLTCL1-203ENST00000449918 NMT2O60551 498 aa20.51■□□□□ 0.87
CLTCL1-203ENST00000449918 PLA2G6O60733 806 aa20.51■□□□□ 0.87
CLTCL1-203ENST00000449918 NOVP48745 357 aa20.51■□□□□ 0.87
CLTCL1-203ENST00000449918 FXR1P51114 621 aaKnown RBP eCLIP20.51■□□□□ 0.87
CLTCL1-203ENST00000449918 RCSD1Q6JBY9 416 aa20.51■□□□□ 0.87
CLTCL1-203ENST00000449918 MSL3Q8N5Y2 521 aaKnown RBP20.51■□□□□ 0.87
CLTCL1-203ENST00000449918 CHST13Q8NET6 341 aa20.51■□□□□ 0.87
CLTCL1-203ENST00000449918 SENP6Q9GZR1 1112 aaPredicted RBP20.51■□□□□ 0.87
CLTCL1-203ENST00000449918 CWC27Q6UX04 472 aaKnown RBP20.5■□□□□ 0.87
CLTCL1-203ENST00000449918 MFSD6Q6ZSS7 791 aa20.5■□□□□ 0.87
CLTCL1-203ENST00000449918 PRO3102Q9H379 93 aa20.5■□□□□ 0.87
CLTCL1-203ENST00000449918 RNF41Q9H4P4 317 aaPredicted RBP20.5■□□□□ 0.87
CLTCL1-203ENST00000449918 TCP11L1Q9NUJ3 509 aa20.5■□□□□ 0.87
CLTCL1-203ENST00000449918 CNPY2Q9Y2B0 182 aa20.5■□□□□ 0.87
CLTCL1-203ENST00000449918 TACC3Q9Y6A5 838 aa20.5■□□□□ 0.87
CLTCL1-203ENST00000449918 MYH4Q9Y623 1939 aa20.49■□□□□ 0.87
CLTCL1-203ENST00000449918 COL11A1P12107 1806 aaPredicted RBP20.49■□□□□ 0.87
CLTCL1-203ENST00000449918 KBTBD13C9JR72 458 aa20.49■□□□□ 0.87
CLTCL1-203ENST00000449918 HAND2P61296 217 aa20.49■□□□□ 0.87
CLTCL1-203ENST00000449918 AKNAD1Q5T1N1 836 aa20.49■□□□□ 0.87
CLTCL1-203ENST00000449918 ANO1Q5XXA6 986 aa20.49■□□□□ 0.87
CLTCL1-203ENST00000449918 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.49■□□□□ 0.87
CLTCL1-203ENST00000449918 ANKRD35Q8N283 1001 aa20.49■□□□□ 0.87
CLTCL1-203ENST00000449918 CHMP4CQ96CF2 233 aa20.49■□□□□ 0.87
CLTCL1-203ENST00000449918 ZMYND8Q9ULU4 1186 aaPredicted RBP20.49■□□□□ 0.87
CLTCL1-203ENST00000449918 DNAJC25-GNG10A0A024R161 153 aa20.48■□□□□ 0.87
CLTCL1-203ENST00000449918 A0A1W2PPC1 479 aa20.48■□□□□ 0.87
CLTCL1-203ENST00000449918 ZNF213O14771 459 aa20.48■□□□□ 0.87
CLTCL1-203ENST00000449918 MYCNP04198 464 aaPredicted RBP20.48■□□□□ 0.87
CLTCL1-203ENST00000449918 RARBP10826 455 aa20.48■□□□□ 0.87
CLTCL1-203ENST00000449918 TOP1P11387 765 aaKnown RBP20.48■□□□□ 0.87
CLTCL1-203ENST00000449918 LRRC26Q2I0M4 334 aa20.48■□□□□ 0.87
CLTCL1-203ENST00000449918 GJC2Q5T442 439 aaPredicted RBP20.48■□□□□ 0.87
CLTCL1-203ENST00000449918 KCTD1Q719H9 257 aa20.48■□□□□ 0.87
CLTCL1-203ENST00000449918 ZNF467Q7Z7K2 595 aaPredicted RBP20.48■□□□□ 0.87
CLTCL1-203ENST00000449918 DCAF4Q8WV16 495 aa20.48■□□□□ 0.87
CLTCL1-203ENST00000449918 NT5C2P49902 561 aa20.47■□□□□ 0.87
CLTCL1-203ENST00000449918 TKFCQ3LXA3 575 aa20.47■□□□□ 0.87
CLTCL1-203ENST00000449918 MAMDC4Q6UXC1 1216 aa20.47■□□□□ 0.87
CLTCL1-203ENST00000449918 TTC14Q96N46 770 aa20.47■□□□□ 0.87
CLTCL1-203ENST00000449918 PCDH10Q9P2E7 1040 aa20.47■□□□□ 0.87
CLTCL1-203ENST00000449918 MTMR7Q9Y216 660 aa20.47■□□□□ 0.87
CLTCL1-203ENST00000449918 SYNGAP1Q96PV0 1343 aa20.47■□□□□ 0.87
CLTCL1-203ENST00000449918 AKR1A1P14550 325 aa20.46■□□□□ 0.87
CLTCL1-203ENST00000449918 SYN1P17600 705 aa20.46■□□□□ 0.87
CLTCL1-203ENST00000449918 BMP8BP34820 402 aa20.46■□□□□ 0.87
CLTCL1-203ENST00000449918 CCDC96Q2M329 555 aa20.46■□□□□ 0.87
CLTCL1-203ENST00000449918 TMEM47Q9BQJ4 181 aa20.46■□□□□ 0.87
CLTCL1-203ENST00000449918 ACAD9Q9H845 621 aa20.46■□□□□ 0.87
CLTCL1-203ENST00000449918 XPNPEP3Q9NQH7 507 aa20.46■□□□□ 0.87
CLTCL1-203ENST00000449918 HOMER2Q9NSB8 354 aa20.46■□□□□ 0.87
CLTCL1-203ENST00000449918 ZNF865P0CJ78 1059 aaPredicted RBP20.45■□□□□ 0.86
CLTCL1-203ENST00000449918 TAL1P17542 331 aaPredicted RBP20.45■□□□□ 0.86
CLTCL1-203ENST00000449918 ATN1P54259 1190 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms