RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 IGKV5-2P06315 115 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 VEGFBP49765 207 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 NBPF12Q5TAG4 269 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 FBXW10Q5XX13 1052 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 THNSL1Q8IYQ7 743 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 SH3TC2Q8TF17 1288 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 LPAR1Q92633 364 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 OSBPL5Q9H0X9 879 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 LTBP4Q8N2S1 1624 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 MED23Q9ULK4 1368 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 PCP11498 1178 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 IDEP14735 1019 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 GBP1P32455 592 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 YARSP54577 528 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 AKNAD1Q5T1N1 836 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 TTC30BQ8N4P2 665 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 SOCS4Q8WXH5 440 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 ACAD9Q9H845 621 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 CHMP5Q9NZZ3 219 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 TYW5A2RUC4 315 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 PDHXO00330 501 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 RABEP1Q15276 862 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 TEX13BQ9BXU2 312 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 PCDHB12Q9Y5F1 795 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 WNT10BO00744 389 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 RIOK3O14730 519 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 TPM3P06753 285 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 CCT2P78371 535 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 HOOK3Q86VS8 718 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 SHCBP1Q8NEM2 672 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 MCOLN1Q9GZU1 580 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 RPAP3Q9H6T3 665 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 RNF146Q9NTX7 359 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 LRP6O75581 1613 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 B4E1Z4 1266 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 ADCY7P51828 1080 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 DYNLL1P63167 89 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 PRMT6Q96LA8 375 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 MXD3Q9BW11 206 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 IMPG2Q9BZV3 1241 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 LRRC27Q9C0I9 530 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 PARP2Q9UGN5 583 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 KCNG1Q9UIX4 513 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 FAM184BQ9ULE4 1060 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 SLC8A2Q9UPR5 921 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 SEPT2Q15019 361 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 CCDC181Q5TID7 509 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 LARP1BQ659C4 914 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 TMEM87BQ96K49 555 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 PLA2G12BQ9BX93 195 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 CERS4Q9HA82 394 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 AHDC1Q5TGY3 1603 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 PPATQ06203 517 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 ZNF569Q5MCW4 686 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 MAGEC2Q9UBF1 373 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 CHMP2AO43633 222 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 CETN1Q12798 172 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 LIN9Q5TKA1 542 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 PRR23BQ6ZRT6 265 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 IFNL3Q8IZI9 196 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 SLAIN1Q8ND83 568 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 FEM1BQ9UK73 627 aa6.36□□□□□ -1.39
CDC42BPA-209ENST00000448940 YBX3P16989 372 aaKnown RBP eCLIP6.35□□□□□ -1.392e-6■■□□□ 12
CDC42BPA-209ENST00000448940 NOLC1Q14978 699 aaKnown RBP eCLIP6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 IQCEQ6IPM2 695 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 FAM83AQ86UY5 434 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 PNMA1Q8ND90 353 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 BRF1Q92994 677 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 KATNAL1Q9BW62 490 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 POLR1AO95602 1720 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 XPAP23025 273 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 RNF207Q6ZRF8 634 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 PNMA5Q96PV4 448 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 DYNC1LI2O43237 492 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 KRT79Q5XKE5 535 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 CEP57L1Q8IYX8 460 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 SSH3Q8TE77 659 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 ARNTL2Q8WYA1 636 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 PNMA6EA0A0J9YXQ4 647 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 FOSP01100 380 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 MARK3P27448 753 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 AMPD3Q01432 767 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 CHD4Q14839 1912 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 STXBP2Q15833 593 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 DCTPP1Q9H773 170 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 DBR1Q9UK59 544 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 STX6O43752 255 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 STAG3L1P0CL83 205 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 NT5C2P49902 561 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 ANAPC15P60006 121 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 PTPN12Q05209 780 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 ASPRV1Q53RT3 343 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 EPHA10Q5JZY3 1008 aa6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 NOP9Q86U38 636 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 EAF2Q96CJ1 260 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-209ENST00000448940 WDR46O15213 610 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 PDIA4P13667 645 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 SDSP20132 328 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 CEBPZQ03701 1054 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms