RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ATRNL1Q5VV63 1379 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 MYH4Q9Y623 1939 aa12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 BRCA1P38398 1863 aaKnown RBP12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 hCG_1642624A0A1W2PR95 340 aa12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 ZBTB7AO95365 584 aa12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 PFKFB1P16118 471 aa12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 PTPREP23469 700 aa12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 SYKP43405 635 aa12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 TOB1P50616 345 aaPredicted RBP12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 NDUFA8P51970 172 aa12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 MAP3K9P80192 1104 aa12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 HIC1Q14526 733 aa12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 DLGAP5Q15398 846 aa12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 ZRSR1Q15695 479 aaKnown RBP12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 RESP18Q5W5W9 173 aa12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 DPY19L2Q6NUT2 758 aa12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 CKAP2LQ8IYA6 745 aa12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 DAGLBQ8NCG7 672 aa12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 OXER1Q8TDS5 423 aa12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 ZNF277Q9NRM2 450 aaPredicted RBP12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 BARHL2Q9NY43 387 aa12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 PCDHA4Q9UN74 947 aa12.1□□□□□ -0.47
VIPAS39-203ENST00000448935 SIPA1L1O43166 1804 aa12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 MPHOSPH10O00566 681 aaKnown RBP12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 ZNF202O95125 648 aa12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 PDHBP11177 359 aa12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 TCP10Q12799 353 aa12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 STX1AQ16623 288 aa12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 CERKLQ49MI3 558 aaPredicted RBP12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 GPATCH4Q5T3I0 446 aaKnown RBP12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 METTL16Q86W50 562 aaKnown RBP12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 BLIDQ8IZY5 108 aa12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 TNFRSF25Q93038 417 aa12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 FERMT2Q96AC1 680 aa12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 CCDC34Q96HJ3 373 aa12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 GMLQ99445 158 aa12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 TDRD3Q9H7E2 651 aaKnown RBP12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 KANSL2Q9H9L4 492 aa12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 GOPCQ9HD26 462 aa12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 CLIP2Q9UDT6 1046 aa12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 HOOK1Q9UJC3 728 aaKnown RBP12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 MTMR7Q9Y216 660 aa12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 HPSEQ9Y251 543 aa12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 CD2APQ9Y5K6 639 aa12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 SRPRBQ9Y5M8 271 aaKnown RBP12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 MRVI1Q9Y6F6 885 aa12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 FER1L6Q2WGJ9 1857 aa12.09□□□□□ -0.47
VIPAS39-203ENST00000448935 PSMD14O00487 310 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 SNHG28P0DPA3 235 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 GNA11P29992 359 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 NPY5RQ15761 445 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 TTC38Q5R3I4 469 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 FKBP1CQ5VVH2 108 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 TATDN1Q6P1N9 297 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 TMEM179Q6ZVK1 233 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 HEATR3Q7Z4Q2 680 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 ELOA2Q8IYF1 753 aaPredicted RBP12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 MTMR14Q8NCE2 650 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 JDP2Q8WYK2 163 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 SHISA4Q96DD7 197 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 PDLIM2Q96JY6 352 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 TAOK3Q9H2K8 898 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 RIOX1Q9H6W3 641 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 C6orf50Q9HD87 102 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 ANO10Q9NW15 660 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 NYAP2Q9P242 653 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 HERC5Q9UII4 1024 aaKnown RBP12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 PCDHB6Q9Y5E3 794 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 DDTLA6NHG4 134 aaPredicted RBP12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 STXBP3O00186 592 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 CYTH3O43739 400 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 MYO1BO43795 1136 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 RAD17O75943 681 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 HS1BP3Q53T59 392 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 WWC2Q6AWC2 1192 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 USP17L2Q6R6M4 530 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 SHC4Q6S5L8 630 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 PIBF1Q8WXW3 757 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 MKL1Q969V6 931 aa12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 PRMT6Q96LA8 375 aaPredicted RBP12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 NAT10Q9H0A0 1025 aaKnown RBP12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 FBXO2Q9UK22 296 aaPredicted RBP12.08□□□□□ -0.48
VIPAS39-203ENST00000448935 BAZ2BQ9UIF8 2168 aaKnown RBP12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 CCDC194A0A1B0GVG4 234 aa12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 ESYT2A0FGR8 921 aa12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 USP17L5A8MUK1 530 aa12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 GOLGA8HP0CJ92 632 aa12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 ATP2B1P20020 1258 aa12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 OSBPP22059 807 aa12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 CACNB3P54284 484 aa12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 NAPAP54920 295 aa12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 ZNF543Q08ER8 600 aa12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 TTLL12Q14166 644 aaPredicted RBP12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 TNIP1Q15025 636 aa12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 ANO6Q4KMQ2 910 aa12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 KANK3Q6NY19 840 aa12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 PIK3AP1Q6ZUJ8 805 aa12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 ZFPM1Q8IX07 1006 aa12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 FAM151AQ8WW52 585 aa12.07□□□□□ -0.48
VIPAS39-203ENST00000448935 PYM1Q9BRP8 204 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms