RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 ZEB2O60315 1214 aa17.72■□□□□ 0.43
CHRD-205ENST00000448472 PKN1Q16512 942 aa17.72■□□□□ 0.43
CHRD-205ENST00000448472 TYW1BQ6NUM6 668 aa17.72■□□□□ 0.43
CHRD-205ENST00000448472 KRT26Q7Z3Y9 468 aa17.72■□□□□ 0.43
CHRD-205ENST00000448472 RIC1Q4ADV7 1423 aa17.72■□□□□ 0.43
CHRD-205ENST00000448472 H7C1D1 291 aa17.71■□□□□ 0.43
CHRD-205ENST00000448472 HSPA2P54652 639 aa17.71■□□□□ 0.43
CHRD-205ENST00000448472 RNASE9P60153 205 aaKnown RBP17.71■□□□□ 0.43
CHRD-205ENST00000448472 ASIC1P78348 528 aa17.71■□□□□ 0.43
CHRD-205ENST00000448472 EHBP1Q8NDI1 1231 aa17.71■□□□□ 0.43
CHRD-205ENST00000448472 SELENOOQ9BVL4 669 aa17.71■□□□□ 0.43
CHRD-205ENST00000448472 FAM207AQ9NSI2 230 aaPredicted RBP17.71■□□□□ 0.43
CHRD-205ENST00000448472 EBAG9O00559 213 aa17.71■□□□□ 0.43
CHRD-205ENST00000448472 VEGFAP15692 232 aaPredicted RBP17.71■□□□□ 0.43
CHRD-205ENST00000448472 C1orf167Q5SNV9 1468 aa17.71■□□□□ 0.43
CHRD-205ENST00000448472 IQCEQ6IPM2 695 aa17.71■□□□□ 0.43
CHRD-205ENST00000448472 NOC4LQ9BVI4 516 aaKnown RBP17.71■□□□□ 0.43
CHRD-205ENST00000448472 LACRTQ9GZZ8 138 aa17.71■□□□□ 0.43
CHRD-205ENST00000448472 FAM107BQ9H098 131 aa17.71■□□□□ 0.43
CHRD-205ENST00000448472 SHTN1A0MZ66 631 aa17.71■□□□□ 0.42
CHRD-205ENST00000448472 E2F4Q16254 413 aa17.71■□□□□ 0.42
CHRD-205ENST00000448472 BCAS4Q8TDM0 211 aa17.71■□□□□ 0.42
CHRD-205ENST00000448472 PPM1EQ8WY54 764 aa17.71■□□□□ 0.42
CHRD-205ENST00000448472 SECISBP2LQ93073 1101 aaKnown RBP17.71■□□□□ 0.42
CHRD-205ENST00000448472 TUBGCP2Q9BSJ2 902 aa17.71■□□□□ 0.42
CHRD-205ENST00000448472 SAMM50Q9Y512 469 aa17.71■□□□□ 0.42
CHRD-205ENST00000448472 RGPD5Q99666 1765 aa17.7■□□□□ 0.42
CHRD-205ENST00000448472 PRPF3O43395 683 aaKnown RBP17.7■□□□□ 0.42
CHRD-205ENST00000448472 USO1O60763 962 aaKnown RBP17.7■□□□□ 0.42
CHRD-205ENST00000448472 MAGEA9P43362 315 aa17.7■□□□□ 0.42
CHRD-205ENST00000448472 SLC20A2Q08357 652 aa17.7■□□□□ 0.42
CHRD-205ENST00000448472 HEATR3Q7Z4Q2 680 aa17.7■□□□□ 0.42
CHRD-205ENST00000448472 VGLL2Q8N8G2 317 aa17.7■□□□□ 0.42
CHRD-205ENST00000448472 GPATCH11Q8N954 259 aa17.7■□□□□ 0.42
CHRD-205ENST00000448472 PLA2G12BQ9BX93 195 aa17.7■□□□□ 0.42
CHRD-205ENST00000448472 SMARCAL1Q9NZC9 954 aa17.7■□□□□ 0.42
CHRD-205ENST00000448472 IBSPP21815 317 aaPredicted RBP17.7■□□□□ 0.42
CHRD-205ENST00000448472 PDE4DQ08499 809 aa17.7■□□□□ 0.42
CHRD-205ENST00000448472 NHEJ1Q9H9Q4 299 aaPredicted RBP17.7■□□□□ 0.42
CHRD-205ENST00000448472 LRWD1Q9UFC0 647 aa17.7■□□□□ 0.42
CHRD-205ENST00000448472 HPCAL4Q9UM19 191 aa17.7■□□□□ 0.42
CHRD-205ENST00000448472 ARFGEF2Q9Y6D5 1785 aa17.7■□□□□ 0.42
CHRD-205ENST00000448472 SCG2P13521 617 aa17.69■□□□□ 0.42
CHRD-205ENST00000448472 PMS1P54277 932 aaKnown RBP17.69■□□□□ 0.42
CHRD-205ENST00000448472 TDRD12Q587J7 1177 aaKnown RBP17.69■□□□□ 0.42
CHRD-205ENST00000448472 KCTD16Q68DU8 428 aa17.69■□□□□ 0.42
CHRD-205ENST00000448472 BICDL1Q6ZP65 573 aa17.69■□□□□ 0.42
CHRD-205ENST00000448472 ADGRA1Q86SQ6 560 aa17.69■□□□□ 0.42
CHRD-205ENST00000448472 COG1Q8WTW3 980 aa17.69■□□□□ 0.42
CHRD-205ENST00000448472 SHISA4Q96DD7 197 aa17.69■□□□□ 0.42
CHRD-205ENST00000448472 RBM28Q9NW13 759 aaKnown RBP17.69■□□□□ 0.42
CHRD-205ENST00000448472 REXO2Q9Y3B8 237 aaKnown RBP17.69■□□□□ 0.42
CHRD-205ENST00000448472 ITIH6Q6UXX5 1313 aa17.69■□□□□ 0.42
CHRD-205ENST00000448472 WDR17Q8IZU2 1322 aa17.69■□□□□ 0.42
CHRD-205ENST00000448472 PPFIA4O75335 1185 aa17.69■□□□□ 0.42
CHRD-205ENST00000448472 ATP1A2P50993 1020 aa17.69■□□□□ 0.42
CHRD-205ENST00000448472 ATP2C1P98194 919 aaPredicted RBP17.69■□□□□ 0.42
CHRD-205ENST00000448472 SH3RF1Q7Z6J0 888 aa17.69■□□□□ 0.42
CHRD-205ENST00000448472 C2CD5Q86YS7 1000 aa17.69■□□□□ 0.42
CHRD-205ENST00000448472 JRKLQ9Y4A0 524 aa17.69■□□□□ 0.42
CHRD-205ENST00000448472 GNGT1P63211 74 aa17.69■□□□□ 0.42
CHRD-205ENST00000448472 INF2Q27J81 1249 aa17.69■□□□□ 0.42
CHRD-205ENST00000448472 CT47A1Q5JQC4 288 aaPredicted RBP17.69■□□□□ 0.42
CHRD-205ENST00000448472 SRBD1Q8N5C6 995 aaKnown RBP17.69■□□□□ 0.42
CHRD-205ENST00000448472 IFT81Q8WYA0 676 aa17.69■□□□□ 0.42
CHRD-205ENST00000448472 EHD4Q9H223 541 aa17.69■□□□□ 0.42
CHRD-205ENST00000448472 EXOC1Q9NV70 894 aa17.69■□□□□ 0.42
CHRD-205ENST00000448472 TACC1O75410 805 aa17.68■□□□□ 0.42
CHRD-205ENST00000448472 MYBL2P10244 700 aa17.68■□□□□ 0.42
CHRD-205ENST00000448472 TRAPPC11Q7Z392 1133 aa17.68■□□□□ 0.42
CHRD-205ENST00000448472 PAFAH1B1P43034 410 aa17.68■□□□□ 0.42
CHRD-205ENST00000448472 HERVK_113P62684 666 aa17.68■□□□□ 0.42
CHRD-205ENST00000448472 ATP2B2Q01814 1243 aa17.68■□□□□ 0.42
CHRD-205ENST00000448472 PACS2Q86VP3 889 aa17.68■□□□□ 0.42
CHRD-205ENST00000448472 ANKRD18AQ8IVF6 992 aa17.68■□□□□ 0.42
CHRD-205ENST00000448472 MTRQ99707 1265 aa17.68■□□□□ 0.42
CHRD-205ENST00000448472 NWD2Q9ULI1 1742 aa17.68■□□□□ 0.42
CHRD-205ENST00000448472 EZH2Q15910 746 aaKnown RBP17.68■□□□□ 0.42
CHRD-205ENST00000448472 KAT14Q9H8E8 782 aa17.68■□□□□ 0.42
CHRD-205ENST00000448472 VAT1LQ9HCJ6 419 aa17.68■□□□□ 0.42
CHRD-205ENST00000448472 WTIPA6NIX2 430 aaPredicted RBP17.67■□□□□ 0.42
CHRD-205ENST00000448472 LGALS16A8MUM7 142 aa17.67■□□□□ 0.42
CHRD-205ENST00000448472 TULP1O00294 542 aaPredicted RBP17.67■□□□□ 0.42
CHRD-205ENST00000448472 CALM1P0DP23 149 aa17.67■□□□□ 0.42
CHRD-205ENST00000448472 CALM2P0DP24 149 aa17.67■□□□□ 0.42
CHRD-205ENST00000448472 CALM3P0DP25 149 aa17.67■□□□□ 0.42
CHRD-205ENST00000448472 DNM2P50570 870 aa17.67■□□□□ 0.42
CHRD-205ENST00000448472 EVX2Q03828 476 aa17.67■□□□□ 0.42
CHRD-205ENST00000448472 CCDC152Q4G0S7 254 aa17.67■□□□□ 0.42
CHRD-205ENST00000448472 ZNF512BQ96KM6 892 aaPredicted RBP17.67■□□□□ 0.42
CHRD-205ENST00000448472 PYM1Q9BRP8 204 aaKnown RBP17.67■□□□□ 0.42
CHRD-205ENST00000448472 IFIH1Q9BYX4 1025 aaKnown RBP17.67■□□□□ 0.42
CHRD-205ENST00000448472 EHD2Q9NZN4 543 aa17.67■□□□□ 0.42
CHRD-205ENST00000448472 STX8Q9UNK0 236 aa17.67■□□□□ 0.42
CHRD-205ENST00000448472 SYF2O95926 243 aaKnown RBP17.67■□□□□ 0.42
CHRD-205ENST00000448472 MNAT1P51948 309 aa17.67■□□□□ 0.42
CHRD-205ENST00000448472 AMPD2Q01433 879 aa17.67■□□□□ 0.42
CHRD-205ENST00000448472 CHRNDQ07001 517 aa17.67■□□□□ 0.42
CHRD-205ENST00000448472 CACNA2D4Q7Z3S7 1137 aa17.67■□□□□ 0.42
CHRD-205ENST00000448472 HPS3Q969F9 1004 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms