RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 MAN1A1P33908 653 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 EIF4A1P60842 406 aaKnown RBP8.55□□□□□ -1.04
NEDD9-204ENST00000448183 GUCY2DQ02846 1103 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 SNCBQ16143 134 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 CCDC125Q86Z20 511 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 JDP2Q8WYK2 163 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 RBM17Q96I25 401 aaKnown RBP8.55□□□□□ -1.04
NEDD9-204ENST00000448183 SLC52A2Q9HAB3 445 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 FAN1Q9Y2M0 1017 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 RRP15Q9Y3B9 282 aaKnown RBP8.55□□□□□ -1.04
NEDD9-204ENST00000448183 CA8P35219 290 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 COPB1P53618 953 aaKnown RBP8.55□□□□□ -1.04
NEDD9-204ENST00000448183 RBM26Q5T8P6 1007 aaKnown RBP8.55□□□□□ -1.04
NEDD9-204ENST00000448183 GPBP1Q86WP2 473 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 SLC35F6Q8N357 371 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 PPP4R1Q8TF05 950 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 RABGAP1Q9Y3P9 1069 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 IKBKBO14920 756 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 THAP12O43422 761 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 SLC12A2P55011 1212 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 CNBD1Q8NA66 436 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 RDH13Q8NBN7 331 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 CACTINQ8WUQ7 758 aaKnown RBP8.55□□□□□ -1.04
NEDD9-204ENST00000448183 RSAD2Q8WXG1 361 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 CHAMP1Q96JM3 812 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 C19orf44Q9H6X5 657 aa8.55□□□□□ -1.04
NEDD9-204ENST00000448183 METTL14Q9HCE5 456 aaKnown RBP8.55□□□□□ -1.04
NEDD9-204ENST00000448183 ARPP21Q9UBL0 812 aaPredicted RBP8.55□□□□□ -1.04
NEDD9-204ENST00000448183 CCDC151A5D8V7 595 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 NEURL1BA8MQ27 555 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 DDX39AO00148 427 aaKnown RBP8.54□□□□□ -1.04
NEDD9-204ENST00000448183 SUN1O94901 812 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 RPN1P04843 607 aaKnown RBP8.54□□□□□ -1.04
NEDD9-204ENST00000448183 CASP14P31944 242 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 VPS41P49754 854 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 POLR2FP61218 127 aaKnown RBP8.54□□□□□ -1.04
NEDD9-204ENST00000448183 EFCAB13Q8IY85 973 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 RUNDC3BQ96NL0 473 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 CLIC6Q96NY7 704 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 GSDMAQ96QA5 445 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 AFG3L2Q9Y4W6 797 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 PHLPP2Q6ZVD8 1323 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 OR52Z1P0C646 297 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 MYCLP12524 364 aaPredicted RBP8.54□□□□□ -1.04
NEDD9-204ENST00000448183 BBOF1Q8ND07 529 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 CFAP61Q8NHU2 1237 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 GGA1Q9UJY5 639 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 N4BP1O75113 896 aaKnown RBP8.54□□□□□ -1.04
NEDD9-204ENST00000448183 CFBP00751 764 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 TNNI1P19237 187 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 SLC39A14Q15043 492 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 FAM47AQ5JRC9 791 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 ANKRD13CQ8N6S4 541 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 Q9H521 79 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 RAB20Q9NX57 234 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 PARP3Q9Y6F1 533 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 USP17L12C9JPN9 530 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 USP17L21D6R901 530 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 OPHN1O60890 802 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 TRIM37O94972 964 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 SEC31AO94979 1220 aaKnown RBP8.54□□□□□ -1.04
NEDD9-204ENST00000448183 BAG2O95816 211 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 PDIA3P30101 505 aaKnown RBP8.54□□□□□ -1.04
NEDD9-204ENST00000448183 CYP2J2P51589 502 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 EPHB4P54760 987 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 YWHAEP62258 255 aaKnown RBP8.54□□□□□ -1.04
NEDD9-204ENST00000448183 KCTD16Q68DU8 428 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 MAPKAPK5Q8IW41 473 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 TPH2Q8IWU9 490 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 IFNL3Q8IZI9 196 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 CCDC197Q8NCU1 140 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 UHMK1Q8TAS1 419 aaKnown RBP8.54□□□□□ -1.04
NEDD9-204ENST00000448183 GSDMBQ8TAX9 411 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 MAP4K1Q92918 833 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 INTS9Q9NV88 658 aaKnown RBP8.54□□□□□ -1.04
NEDD9-204ENST00000448183 BIN2Q9UBW5 565 aaPredicted RBP8.54□□□□□ -1.04
NEDD9-204ENST00000448183 STAP2Q9UGK3 403 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 CLIC4Q9Y696 253 aa8.54□□□□□ -1.04
NEDD9-204ENST00000448183 TECP42680 631 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 ARHGAP4P98171 946 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 EHHADHQ08426 723 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 PDE1CQ14123 709 aaPredicted RBP8.53□□□□□ -1.04
NEDD9-204ENST00000448183 FAM26FQ5R3K3 315 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 GALNT17Q6IS24 598 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 ZNF496Q96IT1 587 aaPredicted RBP8.53□□□□□ -1.04
NEDD9-204ENST00000448183 UIMC1Q96RL1 719 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 ZSCAN10Q96SZ4 725 aaPredicted RBP8.53□□□□□ -1.04
NEDD9-204ENST00000448183 LSG1Q9H089 658 aaKnown RBP8.53□□□□□ -1.04
NEDD9-204ENST00000448183 LARSQ9P2J5 1176 aaKnown RBP8.53□□□□□ -1.04
NEDD9-204ENST00000448183 PCDHA12Q9UN75 941 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 DISP1Q96F81 1524 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 TNKSO95271 1327 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 PASKQ96RG2 1323 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 A0A087WUV0 522 aaPredicted RBP8.53□□□□□ -1.04
NEDD9-204ENST00000448183 GNPATO15228 680 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 SCG2P13521 617 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 LONP1P36776 959 aaKnown RBP8.53□□□□□ -1.04
NEDD9-204ENST00000448183 IFT88Q13099 833 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 CUL4AQ13619 759 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 USH1GQ495M9 461 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms