RNA–Protein interactions for RNA: ENST00000447872.5

VSTM1-206, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene VSTM1, Length 1,041 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-206ENST00000447872 FERMT2Q96AC1 680 aa12.37□□□□□ -0.43
VSTM1-206ENST00000447872 NUP88Q99567 741 aaPredicted RBP12.37□□□□□ -0.43
VSTM1-206ENST00000447872 TEX13BQ9BXU2 312 aa12.37□□□□□ -0.43
VSTM1-206ENST00000447872 XPNPEP3Q9NQH7 507 aa12.37□□□□□ -0.43
VSTM1-206ENST00000447872 PRDM5Q9NQX1 630 aaPredicted RBP12.37□□□□□ -0.43
VSTM1-206ENST00000447872 CLIP2Q9UDT6 1046 aa12.37□□□□□ -0.43
VSTM1-206ENST00000447872 ZNF214Q9UL59 606 aaPredicted RBP12.37□□□□□ -0.43
VSTM1-206ENST00000447872 CTDP1Q9Y5B0 961 aaPredicted RBP12.37□□□□□ -0.43
VSTM1-206ENST00000447872 EYSQ5T1H1 3165 aa12.36□□□□□ -0.43
VSTM1-206ENST00000447872 TDO2P48775 406 aa12.36□□□□□ -0.43
VSTM1-206ENST00000447872 ZNF792Q3KQV3 632 aa12.36□□□□□ -0.43
VSTM1-206ENST00000447872 TRIM60Q495X7 471 aa12.36□□□□□ -0.43
VSTM1-206ENST00000447872 FAM47AQ5JRC9 791 aa12.36□□□□□ -0.43
VSTM1-206ENST00000447872 TSHZ3Q63HK5 1081 aa12.36□□□□□ -0.43
VSTM1-206ENST00000447872 RNF180Q86T96 592 aa12.36□□□□□ -0.43
VSTM1-206ENST00000447872 REPS2Q8NFH8 660 aa12.36□□□□□ -0.43
VSTM1-206ENST00000447872 SYMPKQ92797 1274 aaKnown RBP12.36□□□□□ -0.43
VSTM1-206ENST00000447872 DDX11Q96FC9 970 aa12.36□□□□□ -0.43
VSTM1-206ENST00000447872 NACAP1Q9BZK3 213 aa12.36□□□□□ -0.43
VSTM1-206ENST00000447872 CNPY2Q9Y2B0 182 aa12.36□□□□□ -0.43
VSTM1-206ENST00000447872 PATL2C9JE40 543 aaKnown RBP12.35□□□□□ -0.43
VSTM1-206ENST00000447872 GPAA1O43292 621 aa12.35□□□□□ -0.43
VSTM1-206ENST00000447872 ZBED4O75132 1171 aa12.35□□□□□ -0.43
VSTM1-206ENST00000447872 NDUFB10O96000 172 aa12.35□□□□□ -0.43
VSTM1-206ENST00000447872 PGK1P00558 417 aa12.35□□□□□ -0.43
VSTM1-206ENST00000447872 TAL1P17542 331 aaPredicted RBP12.35□□□□□ -0.43
VSTM1-206ENST00000447872 SLC4A3P48751 1232 aa12.35□□□□□ -0.43
VSTM1-206ENST00000447872 SNX17Q15036 470 aa12.35□□□□□ -0.43
VSTM1-206ENST00000447872 C1orf53Q5VUE5 145 aa12.35□□□□□ -0.43
VSTM1-206ENST00000447872 FAM109BQ6ICB4 259 aaPredicted RBP12.35□□□□□ -0.43
VSTM1-206ENST00000447872 SNRNP48Q6IEG0 339 aaKnown RBP12.35□□□□□ -0.43
VSTM1-206ENST00000447872 MSL3Q8N5Y2 521 aaKnown RBP12.35□□□□□ -0.43
VSTM1-206ENST00000447872 PHF24Q9UPV7 400 aa12.35□□□□□ -0.43
VSTM1-206ENST00000447872 POTEB2H3BUK9 544 aa12.34□□□□□ -0.43
VSTM1-206ENST00000447872 ATP2A1O14983 1001 aa12.34□□□□□ -0.43
VSTM1-206ENST00000447872 ERC2O15083 957 aa12.34□□□□□ -0.43
VSTM1-206ENST00000447872 SLC3A2P08195 630 aaKnown RBP12.34□□□□□ -0.43
VSTM1-206ENST00000447872 AKR1A1P14550 325 aa12.34□□□□□ -0.43
VSTM1-206ENST00000447872 TLE2Q04725 743 aa12.34□□□□□ -0.43
VSTM1-206ENST00000447872 CPXCR1Q8N123 301 aa12.34□□□□□ -0.43
VSTM1-206ENST00000447872 BADQ92934 168 aa12.34□□□□□ -0.43
VSTM1-206ENST00000447872 MKL1Q969V6 931 aa12.34□□□□□ -0.43
VSTM1-206ENST00000447872 MTMR4Q9NYA4 1195 aa12.34□□□□□ -0.43
VSTM1-206ENST00000447872 SYNPO2Q9UMS6 1093 aa12.34□□□□□ -0.43
VSTM1-206ENST00000447872 TACC3Q9Y6A5 838 aa12.34□□□□□ -0.43
VSTM1-206ENST00000447872 NAV1Q8NEY1 1877 aa12.34□□□□□ -0.43
VSTM1-206ENST00000447872 ROBO3Q96MS0 1386 aa12.33□□□□□ -0.44
VSTM1-206ENST00000447872 IGKV6D-41A0A0C4DH26 115 aa12.33□□□□□ -0.44
VSTM1-206ENST00000447872 M0R2C6 588 aa12.33□□□□□ -0.44
VSTM1-206ENST00000447872 PRDM1O75626 825 aa12.33□□□□□ -0.44
VSTM1-206ENST00000447872 SEC24BO95487 1268 aa12.33□□□□□ -0.44
VSTM1-206ENST00000447872 TTLL1O95922 423 aa12.33□□□□□ -0.44
VSTM1-206ENST00000447872 ZNF865P0CJ78 1059 aaPredicted RBP12.33□□□□□ -0.44
VSTM1-206ENST00000447872 NUCB1Q02818 461 aa12.33□□□□□ -0.44
VSTM1-206ENST00000447872 PDE4BQ07343 736 aa12.33□□□□□ -0.44
VSTM1-206ENST00000447872 SHHQ15465 462 aa12.33□□□□□ -0.44
VSTM1-206ENST00000447872 IFNL3Q8IZI9 196 aa12.33□□□□□ -0.44
VSTM1-206ENST00000447872 KIFC2Q96AC6 838 aa12.33□□□□□ -0.44
VSTM1-206ENST00000447872 CEP95Q96GE4 821 aa12.33□□□□□ -0.44
VSTM1-206ENST00000447872 EPB41L4AQ9HCS5 686 aaPredicted RBP12.33□□□□□ -0.44
VSTM1-206ENST00000447872 PDLIM7Q9NR12 457 aa12.33□□□□□ -0.44
VSTM1-206ENST00000447872 FEM1BQ9UK73 627 aa12.33□□□□□ -0.44
VSTM1-206ENST00000447872 FAM184BQ9ULE4 1060 aa12.33□□□□□ -0.44
VSTM1-206ENST00000447872 RIPK3Q9Y572 518 aa12.33□□□□□ -0.44
VSTM1-206ENST00000447872 TTC41PQ6P2S7 1318 aa12.33□□□□□ -0.44
VSTM1-206ENST00000447872 SYNGAP1Q96PV0 1343 aa12.33□□□□□ -0.44
VSTM1-206ENST00000447872 DNAJC25-GNG10A0A024R161 153 aa12.32□□□□□ -0.44
VSTM1-206ENST00000447872 TRIM43BA6NCK2 446 aa12.32□□□□□ -0.44
VSTM1-206ENST00000447872 TSPY3P0CV98 308 aa12.32□□□□□ -0.44
VSTM1-206ENST00000447872 TSPY8P0CW00 308 aa12.32□□□□□ -0.44
VSTM1-206ENST00000447872 NBR1Q14596 966 aa12.32□□□□□ -0.44
VSTM1-206ENST00000447872 MAMDC4Q6UXC1 1216 aa12.32□□□□□ -0.44
VSTM1-206ENST00000447872 SH3RF1Q7Z6J0 888 aa12.32□□□□□ -0.44
VSTM1-206ENST00000447872 ANKRD35Q8N283 1001 aa12.32□□□□□ -0.44
VSTM1-206ENST00000447872 GMCL1P1Q8NEA9 526 aa12.32□□□□□ -0.44
VSTM1-206ENST00000447872 NUP133Q8WUM0 1156 aa12.32□□□□□ -0.44
VSTM1-206ENST00000447872 TRIM43Q96BQ3 446 aaPredicted RBP12.32□□□□□ -0.44
VSTM1-206ENST00000447872 TSEN34Q9BSV6 310 aaKnown RBP12.32□□□□□ -0.44
VSTM1-206ENST00000447872 FSD1Q9BTV5 496 aa12.32□□□□□ -0.44
VSTM1-206ENST00000447872 SLC38A10Q9HBR0 1119 aa12.32□□□□□ -0.44
VSTM1-206ENST00000447872 RAVER2Q9HCJ3 691 aaKnown RBP12.32□□□□□ -0.44
VSTM1-206ENST00000447872 FBXO40Q9UH90 709 aa12.32□□□□□ -0.44
VSTM1-206ENST00000447872 ALPK3Q96L96 1907 aa12.32□□□□□ -0.44
VSTM1-206ENST00000447872 CACNA1AO00555 2505 aa12.32□□□□□ -0.44
VSTM1-206ENST00000447872 PRUNE2Q8WUY3 3088 aa12.31□□□□□ -0.44
VSTM1-206ENST00000447872 A0A1W2PQ45 241 aaPredicted RBP12.31□□□□□ -0.44
VSTM1-206ENST00000447872 A0A1W2PQY0 241 aa12.31□□□□□ -0.44
VSTM1-206ENST00000447872 PQBP1O60828 265 aaKnown RBP12.31□□□□□ -0.44
VSTM1-206ENST00000447872 SNAI1O95863 264 aaPredicted RBP12.31□□□□□ -0.44
VSTM1-206ENST00000447872 CLTBP09497 229 aa12.31□□□□□ -0.44
VSTM1-206ENST00000447872 FDX1P10109 184 aa12.31□□□□□ -0.44
VSTM1-206ENST00000447872 BMP3P12645 472 aa12.31□□□□□ -0.44
VSTM1-206ENST00000447872 ACLYP53396 1101 aa12.31□□□□□ -0.44
VSTM1-206ENST00000447872 OAZ1P54368 228 aa12.31□□□□□ -0.44
VSTM1-206ENST00000447872 TFAP4Q01664 338 aa12.31□□□□□ -0.44
VSTM1-206ENST00000447872 ZNF697Q5TEC3 545 aa12.31□□□□□ -0.44
VSTM1-206ENST00000447872 SLFN13Q68D06 897 aa12.31□□□□□ -0.44
VSTM1-206ENST00000447872 ZNF467Q7Z7K2 595 aaPredicted RBP12.31□□□□□ -0.44
VSTM1-206ENST00000447872 LRRC47Q8N1G4 583 aaKnown RBP12.31□□□□□ -0.44
VSTM1-206ENST00000447872 CHST13Q8NET6 341 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms