RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 BECN2A8MW95 431 aa6.77□□□□□ -1.33
PROM1-201ENST00000447510 USP17L10C9JJH3 530 aa6.77□□□□□ -1.33
PROM1-201ENST00000447510 SHMT1P34896 483 aa6.77□□□□□ -1.33
PROM1-201ENST00000447510 USP14P54578 494 aa6.77□□□□□ -1.33
PROM1-201ENST00000447510 ARHGAP29Q52LW3 1261 aa6.77□□□□□ -1.33
PROM1-201ENST00000447510 SH3BP5LQ7L8J4 393 aa6.77□□□□□ -1.33
PROM1-201ENST00000447510 SCYL3Q8IZE3 742 aa6.77□□□□□ -1.33
PROM1-201ENST00000447510 ZNF654Q8IZM8 581 aa6.77□□□□□ -1.33
PROM1-201ENST00000447510 GPHNQ9NQX3 736 aaPredicted RBP6.77□□□□□ -1.33
PROM1-201ENST00000447510 SH2B1Q9NRF2 756 aaPredicted RBP6.77□□□□□ -1.33
PROM1-201ENST00000447510 ARGLU1Q9NWB6 273 aaPredicted RBP6.77□□□□□ -1.33
PROM1-201ENST00000447510 MYO1CO00159 1063 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 SLU7O95391 586 aaKnown RBP6.76□□□□□ -1.33
PROM1-201ENST00000447510 GOLGA8HP0CJ92 632 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 IBSPP21815 317 aaPredicted RBP6.76□□□□□ -1.33
PROM1-201ENST00000447510 FMR1Q06787 632 aaKnown RBP eCLIP6.76□□□□□ -1.33
PROM1-201ENST00000447510 ZSCAN26Q16670 478 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 CNPY4Q8N129 248 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 SMCR8Q8TEV9 937 aaPredicted RBP6.76□□□□□ -1.33
PROM1-201ENST00000447510 BEGAINQ9BUH8 593 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 COL4A5P29400 1685 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 FRMPD2Q68DX3 1309 aaPredicted RBP6.76□□□□□ -1.33
PROM1-201ENST00000447510 LRRC37AA6NMS7 1700 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 UBE2HP62256 183 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 DNM1Q05193 864 aaKnown RBP6.76□□□□□ -1.33
PROM1-201ENST00000447510 ARID5BQ14865 1188 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 SAFBQ15424 915 aaKnown RBP eCLIP6.76□□□□□ -1.33
PROM1-201ENST00000447510 ANO6Q4KMQ2 910 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 NOM1Q5C9Z4 860 aaKnown RBP6.76□□□□□ -1.33
PROM1-201ENST00000447510 DGKHQ86XP1 1220 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 ZNF784Q8NCA9 323 aaPredicted RBP6.76□□□□□ -1.33
PROM1-201ENST00000447510 BICD2Q8TD16 824 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 UBXN4Q92575 508 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 SLC26A6Q9BXS9 759 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 TNMDQ9H2S6 317 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 KIF13BQ9NQT8 1826 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 TMEM232C9JQI7 657 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 FLOT1O75955 427 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 SKILP12757 684 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 NT5C2P49902 561 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 HMGCS2P54868 508 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 SSRP1Q08945 709 aaKnown RBP6.76□□□□□ -1.33
PROM1-201ENST00000447510 PABPC4Q13310 644 aaKnown RBP eCLIP6.76□□□□□ -1.33
PROM1-201ENST00000447510 MB21D2Q8IYB1 491 aaPredicted RBP6.76□□□□□ -1.33
PROM1-201ENST00000447510 TXLNBQ8N3L3 684 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 ZNF280CQ8ND82 737 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 KIFC2Q96AC6 838 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 ZBED3Q96IU2 234 aaPredicted RBP6.76□□□□□ -1.33
PROM1-201ENST00000447510 TTC14Q96N46 770 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 TMEM47Q9BQJ4 181 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 NUP62CLQ9H1M0 184 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 MYH2Q9UKX2 1941 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 MYH13Q9UKX3 1938 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 USP27XA6NNY8 438 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 MTMR2Q13614 643 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 MAP3K11Q16584 847 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 OTUD7BQ6GQQ9 843 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 KCTD1Q719H9 257 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 ENAHQ8N8S7 591 aaPredicted RBP6.76□□□□□ -1.33
PROM1-201ENST00000447510 CHURC1Q8WUH1 139 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 NCOA5Q9HCD5 579 aaKnown RBP6.76□□□□□ -1.33
PROM1-201ENST00000447510 MTMR4Q9NYA4 1195 aa6.76□□□□□ -1.33
PROM1-201ENST00000447510 SH2B2O14492 632 aaPredicted RBP6.75□□□□□ -1.33
PROM1-201ENST00000447510 SEC31AO94979 1220 aaKnown RBP6.75□□□□□ -1.33
PROM1-201ENST00000447510 BMP3P12645 472 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 CYP2C19P33261 490 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 VGLL4Q14135 290 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 FAM173BQ6P4H8 233 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 LEKR1Q6ZMV7 388 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 ERO1BQ86YB8 467 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 CPXCR1Q8N123 301 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 FAM200AQ8TCP9 573 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 CACTINQ8WUQ7 758 aaKnown RBP6.75□□□□□ -1.33
PROM1-201ENST00000447510 MYCBPQ99417 103 aaPredicted RBP6.75□□□□□ -1.33
PROM1-201ENST00000447510 PAGR1Q9BTK6 254 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 BRMS1Q9HCU9 246 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.75□□□□□ -1.33
PROM1-201ENST00000447510 LCMT1Q9UIC8 334 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 ATP6V1DQ9Y5K8 247 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 F5H6K3 240 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 CASQ1P31415 396 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 KLRC3Q07444 240 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 TSGA10IPQ3SY00 556 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 USP17L2Q6R6M4 530 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 KLRG1Q96E93 195 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 UBA5Q9GZZ9 404 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 DNAJC25Q9H1X3 360 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 RBM28Q9NW13 759 aaKnown RBP6.75□□□□□ -1.33
PROM1-201ENST00000447510 ORC3Q9UBD5 711 aaPredicted RBP6.75□□□□□ -1.33
PROM1-201ENST00000447510 MKRN1Q9UHC7 482 aaKnown RBP6.75□□□□□ -1.33
PROM1-201ENST00000447510 CNTNAP1P78357 1384 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 FER1L6Q2WGJ9 1857 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 SCN9AQ15858 1988 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 POTECB2RU33 542 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 FOXP2O15409 715 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 TBC1D12O60347 775 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 ZBED4O75132 1171 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 USP2O75604 605 aaPredicted RBP6.75□□□□□ -1.33
PROM1-201ENST00000447510 SLC20A2Q08357 652 aa6.75□□□□□ -1.33
PROM1-201ENST00000447510 TTC31Q49AM3 519 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms