RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 YBX2Q9Y2T7 364 aaKnown RBP8.63□□□□□ -1.03
LRRC28-203ENST00000447360 A0A0U1RQG5 324 aaPredicted RBP8.62□□□□□ -1.03
LRRC28-203ENST00000447360 ARVCFO00192 962 aa8.62□□□□□ -1.03
LRRC28-203ENST00000447360 APBB1O00213 710 aa8.62□□□□□ -1.03
LRRC28-203ENST00000447360 TLR3O15455 904 aaKnown RBP8.62□□□□□ -1.03
LRRC28-203ENST00000447360 ASGR1P07306 291 aa8.62□□□□□ -1.03
LRRC28-203ENST00000447360 COPB2P35606 906 aa8.62□□□□□ -1.03
LRRC28-203ENST00000447360 SKIV2LQ15477 1246 aaKnown RBP8.62□□□□□ -1.03
LRRC28-203ENST00000447360 PPP2R2DQ66LE6 453 aa8.62□□□□□ -1.03
LRRC28-203ENST00000447360 RIOX2Q8IUF8 465 aa8.62□□□□□ -1.03
LRRC28-203ENST00000447360 HOMEZQ8IX15 550 aa8.62□□□□□ -1.03
LRRC28-203ENST00000447360 FAM126BQ8IXS8 530 aa8.62□□□□□ -1.03
LRRC28-203ENST00000447360 LENG1Q96BZ8 264 aaPredicted RBP8.62□□□□□ -1.03
LRRC28-203ENST00000447360 ATG4CQ96DT6 458 aa8.62□□□□□ -1.03
LRRC28-203ENST00000447360 FAM212AQ96EL1 285 aa8.62□□□□□ -1.03
LRRC28-203ENST00000447360 CDCA7LQ96GN5 454 aa8.62□□□□□ -1.03
LRRC28-203ENST00000447360 SPC25Q9HBM1 224 aa8.62□□□□□ -1.03
LRRC28-203ENST00000447360 NOB1Q9ULX3 412 aaKnown RBP8.62□□□□□ -1.03
LRRC28-203ENST00000447360 ADAMTS5Q9UNA0 930 aa8.62□□□□□ -1.03
LRRC28-203ENST00000447360 CCER2I3L3R5 266 aa8.61□□□□□ -1.03
LRRC28-203ENST00000447360 MPHOSPH10O00566 681 aaKnown RBP8.61□□□□□ -1.03
LRRC28-203ENST00000447360 WDR46O15213 610 aaKnown RBP8.61□□□□□ -1.03
LRRC28-203ENST00000447360 TLL1O43897 1013 aa8.61□□□□□ -1.03
LRRC28-203ENST00000447360 CD4P01730 458 aa8.61□□□□□ -1.03
LRRC28-203ENST00000447360 CHRM1P11229 460 aaPredicted RBP8.61□□□□□ -1.03
LRRC28-203ENST00000447360 STAT3P40763 770 aa8.61□□□□□ -1.03
LRRC28-203ENST00000447360 ZAP70P43403 619 aa8.61□□□□□ -1.03
LRRC28-203ENST00000447360 KIAA1755Q5JYT7 1200 aa8.61□□□□□ -1.03
LRRC28-203ENST00000447360 MAMDC4Q6UXC1 1216 aa8.61□□□□□ -1.03
LRRC28-203ENST00000447360 TMEM179Q6ZVK1 233 aa8.61□□□□□ -1.03
LRRC28-203ENST00000447360 ALYREFQ86V81 257 aaKnown RBP8.61□□□□□ -1.03
LRRC28-203ENST00000447360 MICALL1Q8N3F8 863 aa8.61□□□□□ -1.03
LRRC28-203ENST00000447360 MIGA1Q8NAN2 632 aa8.61□□□□□ -1.03
LRRC28-203ENST00000447360 VTI1AQ96AJ9 217 aa8.61□□□□□ -1.03
LRRC28-203ENST00000447360 PPP1R12CQ9BZL4 782 aa8.61□□□□□ -1.03
LRRC28-203ENST00000447360 SH2D4AQ9H788 454 aa8.61□□□□□ -1.03
LRRC28-203ENST00000447360 VCPKMTQ9H867 229 aa8.61□□□□□ -1.03
LRRC28-203ENST00000447360 C11orf16Q9NQ32 467 aa8.61□□□□□ -1.03
LRRC28-203ENST00000447360 PIH1D3Q9NQM4 214 aaKnown RBP8.61□□□□□ -1.03
LRRC28-203ENST00000447360 TMX2Q9Y320 296 aa8.61□□□□□ -1.03
LRRC28-203ENST00000447360 PCDHA11Q9Y5I1 949 aa8.61□□□□□ -1.03
LRRC28-203ENST00000447360 MTCH2Q9Y6C9 303 aa8.61□□□□□ -1.03
LRRC28-203ENST00000447360 WDFY4Q6ZS81 3184 aa8.61□□□□□ -1.03
LRRC28-203ENST00000447360 MYADML2A6NDP7 307 aa8.6□□□□□ -1.03
LRRC28-203ENST00000447360 PI4K2BG5E9Z4 385 aa8.6□□□□□ -1.03
LRRC28-203ENST00000447360 IDH1O75874 414 aaKnown RBP8.6□□□□□ -1.03
LRRC28-203ENST00000447360 SNAI1O95863 264 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-203ENST00000447360 POLR3DP05423 398 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-203ENST00000447360 CT47B1P0C2W7 299 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-203ENST00000447360 C6orf222P0C671 652 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-203ENST00000447360 CYP2C18P33260 490 aa8.6□□□□□ -1.03
LRRC28-203ENST00000447360 GJA9P57773 515 aa8.6□□□□□ -1.03
LRRC28-203ENST00000447360 NKX3-2P78367 333 aa8.6□□□□□ -1.03
LRRC28-203ENST00000447360 TNNI3KQ59H18 835 aa8.6□□□□□ -1.03
LRRC28-203ENST00000447360 GNASQ5JWF2 1037 aa8.6□□□□□ -1.03
LRRC28-203ENST00000447360 OTOP2Q7RTS6 562 aa8.6□□□□□ -1.03
LRRC28-203ENST00000447360 ZNF467Q7Z7K2 595 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-203ENST00000447360 SIAH1Q8IUQ4 282 aa8.6□□□□□ -1.03
LRRC28-203ENST00000447360 RPUSD2Q8IZ73 545 aaKnown RBP8.6□□□□□ -1.03
LRRC28-203ENST00000447360 SPICE1Q8N0Z3 855 aa8.6□□□□□ -1.03
LRRC28-203ENST00000447360 DBNDD2Q9BQY9 259 aa8.6□□□□□ -1.03
LRRC28-203ENST00000447360 SEZ6LQ9BYH1 1024 aa8.6□□□□□ -1.03
LRRC28-203ENST00000447360 UPF3AQ9H1J1 476 aaKnown RBP8.6□□□□□ -1.03
LRRC28-203ENST00000447360 HIPK3Q9H422 1215 aa8.6□□□□□ -1.03
LRRC28-203ENST00000447360 ARHGEF10LQ9HCE6 1279 aa8.6□□□□□ -1.03
LRRC28-203ENST00000447360 SLC4A7Q9Y6M7 1214 aa8.6□□□□□ -1.03
LRRC28-203ENST00000447360 FPGT-TNNI3KV9GXZ4 949 aa8.6□□□□□ -1.03
LRRC28-203ENST00000447360 SMCHD1A6NHR9 2005 aa8.59□□□□□ -1.03
LRRC28-203ENST00000447360 SMIM22K7EJ46 135 aa8.59□□□□□ -1.03
LRRC28-203ENST00000447360 VWA5AO00534 786 aa8.59□□□□□ -1.03
LRRC28-203ENST00000447360 CABYRO75952 493 aa8.59□□□□□ -1.03
LRRC28-203ENST00000447360 GNAI2P04899 355 aa8.59□□□□□ -1.03
LRRC28-203ENST00000447360 ATP2A2P16615 1042 aaKnown RBP8.59□□□□□ -1.03
LRRC28-203ENST00000447360 RABGGTBP53611 331 aa8.59□□□□□ -1.03
LRRC28-203ENST00000447360 SLFN5Q08AF3 891 aa8.59□□□□□ -1.03
LRRC28-203ENST00000447360 ACVR2BQ13705 512 aa8.59□□□□□ -1.03
LRRC28-203ENST00000447360 TRMT2AQ8IZ69 625 aaKnown RBP8.59□□□□□ -1.03
LRRC28-203ENST00000447360 MAGEB6Q8N7X4 407 aa8.59□□□□□ -1.03
LRRC28-203ENST00000447360 SLC43A3Q8NBI5 491 aa8.59□□□□□ -1.03
LRRC28-203ENST00000447360 ARHGAP45Q92619 1136 aa8.59□□□□□ -1.03
LRRC28-203ENST00000447360 HLA-CQ95604 372 aa8.59□□□□□ -1.03
LRRC28-203ENST00000447360 RIOK1Q9BRS2 568 aaKnown RBP8.59□□□□□ -1.03
LRRC28-203ENST00000447360 ABHD16BQ9H3Z7 469 aa8.59□□□□□ -1.03
LRRC28-203ENST00000447360 SWAP70Q9UH65 585 aa8.59□□□□□ -1.03
LRRC28-203ENST00000447360 ZHX1Q9UKY1 873 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-203ENST00000447360 ZNF214Q9UL59 606 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-203ENST00000447360 PPP1R9AQ9ULJ8 1098 aa8.59□□□□□ -1.03
LRRC28-203ENST00000447360 A0A0G2JMZ2 1700 aa8.59□□□□□ -1.03
LRRC28-203ENST00000447360 FOCADQ5VW36 1801 aa8.59□□□□□ -1.03
LRRC28-203ENST00000447360 PLXNA1Q9UIW2 1896 aa8.58□□□□□ -1.04
LRRC28-203ENST00000447360 DNAJC25-GNG10A0A024R161 153 aa8.58□□□□□ -1.04
LRRC28-203ENST00000447360 PNMA6EA0A0J9YXQ4 647 aa8.58□□□□□ -1.04
LRRC28-203ENST00000447360 PRR33A8MZF0 331 aa8.58□□□□□ -1.04
LRRC28-203ENST00000447360 ICA1Q05084 483 aa8.58□□□□□ -1.04
LRRC28-203ENST00000447360 CCDC144BQ3MJ40 725 aa8.58□□□□□ -1.04
LRRC28-203ENST00000447360 TMEM67Q5HYA8 995 aa8.58□□□□□ -1.04
LRRC28-203ENST00000447360 REPS2Q8NFH8 660 aa8.58□□□□□ -1.04
LRRC28-203ENST00000447360 KHSRPQ92945 711 aaKnown RBP eCLIP8.58□□□□□ -1.04
LRRC28-203ENST00000447360 DDX11Q96FC9 970 aa8.58□□□□□ -1.04
LRRC28-203ENST00000447360 SNX27Q96L92 541 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms