RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 FAM43AQ8N2R8 423 aa20.93■□□□□ 0.94
TRAPPC4-203ENST00000447216 SRBD1Q8N5C6 995 aaKnown RBP20.93■□□□□ 0.94
TRAPPC4-203ENST00000447216 RBM28Q9NW13 759 aaKnown RBP20.93■□□□□ 0.94
TRAPPC4-203ENST00000447216 FEM1BQ9UK73 627 aa20.93■□□□□ 0.94
TRAPPC4-203ENST00000447216 K7ELQ4 463 aaPredicted RBP20.92■□□□□ 0.94
TRAPPC4-203ENST00000447216 PDHXO00330 501 aa20.92■□□□□ 0.94
TRAPPC4-203ENST00000447216 IGF2BP3O00425 579 aaKnown RBP eCLIP20.92■□□□□ 0.94
TRAPPC4-203ENST00000447216 STAT2P52630 851 aa20.92■□□□□ 0.94
TRAPPC4-203ENST00000447216 SNAP25P60880 206 aa20.92■□□□□ 0.94
TRAPPC4-203ENST00000447216 SYDE2Q5VT97 1194 aa20.92■□□□□ 0.94
TRAPPC4-203ENST00000447216 ANKRD23Q86SG2 305 aa20.92■□□□□ 0.94
TRAPPC4-203ENST00000447216 PIBF1Q8WXW3 757 aa20.92■□□□□ 0.94
TRAPPC4-203ENST00000447216 KIFC2Q96AC6 838 aa20.92■□□□□ 0.94
TRAPPC4-203ENST00000447216 VAT1LQ9HCJ6 419 aa20.92■□□□□ 0.94
TRAPPC4-203ENST00000447216 HOXA7P31268 230 aaPredicted RBP20.91■□□□□ 0.94
TRAPPC4-203ENST00000447216 GNAQP50148 359 aa20.91■□□□□ 0.94
TRAPPC4-203ENST00000447216 IRX3P78415 501 aaPredicted RBP20.91■□□□□ 0.94
TRAPPC4-203ENST00000447216 BTNL9Q6UXG8 535 aa20.91■□□□□ 0.94
TRAPPC4-203ENST00000447216 FAM160B2Q86V87 743 aa20.91■□□□□ 0.94
TRAPPC4-203ENST00000447216 CHURC1Q8WUH1 139 aa20.91■□□□□ 0.94
TRAPPC4-203ENST00000447216 SLF1Q9BQI6 1058 aa20.91■□□□□ 0.94
TRAPPC4-203ENST00000447216 ASCC2Q9H1I8 757 aaPredicted RBP20.91■□□□□ 0.94
TRAPPC4-203ENST00000447216 THSD7BQ9C0I4 1608 aa20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 CNTNAP5Q8WYK1 1306 aa20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 CCDC196A0A1B0GTZ2 297 aa20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 CPLX1O14810 134 aa20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 CYTH3O43739 400 aa20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 DHX16O60231 1041 aaKnown RBP20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 CTDNEP1O95476 244 aa20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 FUT2Q10981 343 aa20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 SREBF2Q12772 1141 aa20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 PABPC4Q13310 644 aaKnown RBP eCLIP20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 PPP2R5BQ15173 497 aa20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 NTRK3Q16288 839 aa20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 IFNL1Q8IU54 200 aa20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 ADGRF4Q8IZF3 695 aa20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 PHKBQ93100 1093 aa20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 ATG4CQ96DT6 458 aa20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 P2RX7Q99572 595 aaKnown RBP20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 PPP1R9AQ9ULJ8 1098 aa20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 PRR12Q9ULL5 1215 aa20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 A0A0G2JMZ2 1700 aa20.9■□□□□ 0.94
TRAPPC4-203ENST00000447216 hCG_1642624A0A1W2PR95 340 aa20.89■□□□□ 0.93
TRAPPC4-203ENST00000447216 PLA2G6O60733 806 aa20.89■□□□□ 0.93
TRAPPC4-203ENST00000447216 OSBPP22059 807 aa20.89■□□□□ 0.93
TRAPPC4-203ENST00000447216 DSG3P32926 999 aa20.89■□□□□ 0.93
TRAPPC4-203ENST00000447216 COG2Q14746 738 aa20.89■□□□□ 0.93
TRAPPC4-203ENST00000447216 LZTS2Q9BRK4 669 aa20.89■□□□□ 0.93
TRAPPC4-203ENST00000447216 JMJD4Q9H9V9 463 aa20.89■□□□□ 0.93
TRAPPC4-203ENST00000447216 SPDYE16A6NNV3 312 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC4-203ENST00000447216 JAK2O60674 1132 aa20.88■□□□□ 0.93
TRAPPC4-203ENST00000447216 CYP2C8P10632 490 aa20.88■□□□□ 0.93
TRAPPC4-203ENST00000447216 ANP32AP39687 249 aaKnown RBP20.88■□□□□ 0.93
TRAPPC4-203ENST00000447216 TM4SF4P48230 202 aa20.88■□□□□ 0.93
TRAPPC4-203ENST00000447216 INHBEP58166 350 aa20.88■□□□□ 0.93
TRAPPC4-203ENST00000447216 PRPF38AQ8NAV1 312 aaKnown RBP20.88■□□□□ 0.93
TRAPPC4-203ENST00000447216 SPZ1Q9BXG8 430 aa20.88■□□□□ 0.93
TRAPPC4-203ENST00000447216 RIOX1Q9H6W3 641 aa20.88■□□□□ 0.93
TRAPPC4-203ENST00000447216 PEX10O60683 326 aa20.87■□□□□ 0.93
TRAPPC4-203ENST00000447216 IFNAR1P17181 557 aa20.87■□□□□ 0.93
TRAPPC4-203ENST00000447216 CUL4AQ13619 759 aa20.87■□□□□ 0.93
TRAPPC4-203ENST00000447216 CPLX2Q6PUV4 134 aaKnown RBP20.87■□□□□ 0.93
TRAPPC4-203ENST00000447216 HOMER1Q86YM7 354 aa20.87■□□□□ 0.93
TRAPPC4-203ENST00000447216 NSUN7Q8NE18 718 aaKnown RBP20.87■□□□□ 0.93
TRAPPC4-203ENST00000447216 PIGSQ96S52 555 aa20.87■□□□□ 0.93
TRAPPC4-203ENST00000447216 SLC26A6Q9BXS9 759 aa20.87■□□□□ 0.93
TRAPPC4-203ENST00000447216 FOXD4L1Q9NU39 408 aa20.87■□□□□ 0.93
TRAPPC4-203ENST00000447216 PNMA3Q9UL41 463 aa20.87■□□□□ 0.93
TRAPPC4-203ENST00000447216 SLC45A1Q9Y2W3 748 aa20.87■□□□□ 0.93
TRAPPC4-203ENST00000447216 HERVK_113P62684 666 aa20.86■□□□□ 0.93
TRAPPC4-203ENST00000447216 CCDC174Q6PII3 467 aa20.86■□□□□ 0.93
TRAPPC4-203ENST00000447216 POTEEQ6S8J3 1075 aa20.86■□□□□ 0.93
TRAPPC4-203ENST00000447216 DDX11Q96FC9 970 aa20.86■□□□□ 0.93
TRAPPC4-203ENST00000447216 HOXC10Q9NYD6 342 aa20.86■□□□□ 0.93
TRAPPC4-203ENST00000447216 V9GY48 417 aaPredicted RBP20.86■□□□□ 0.93
TRAPPC4-203ENST00000447216 PTPDC1A2A3K4 754 aa20.85■□□□□ 0.93
TRAPPC4-203ENST00000447216 TAL1P17542 331 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC4-203ENST00000447216 SMARCA1P28370 1054 aa20.85■□□□□ 0.93
TRAPPC4-203ENST00000447216 MAP2K2P36507 400 aa20.85■□□□□ 0.93
TRAPPC4-203ENST00000447216 SSRP1Q08945 709 aaKnown RBP20.85■□□□□ 0.93
TRAPPC4-203ENST00000447216 BECN1Q14457 450 aa20.85■□□□□ 0.93
TRAPPC4-203ENST00000447216 TAF1CQ15572 869 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC4-203ENST00000447216 CDC37Q16543 378 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC4-203ENST00000447216 SPRYD3Q8NCJ5 442 aa20.85■□□□□ 0.93
TRAPPC4-203ENST00000447216 MTMR8Q96EF0 704 aa20.85■□□□□ 0.93
TRAPPC4-203ENST00000447216 RANBP17Q9H2T7 1088 aaKnown RBP20.85■□□□□ 0.93
TRAPPC4-203ENST00000447216 MYPNQ86TC9 1320 aa20.84■□□□□ 0.93
TRAPPC4-203ENST00000447216 VWA5AO00534 786 aa20.84■□□□□ 0.93
TRAPPC4-203ENST00000447216 ZBED4O75132 1171 aa20.84■□□□□ 0.93
TRAPPC4-203ENST00000447216 CDKL5O76039 1030 aa20.84■□□□□ 0.93
TRAPPC4-203ENST00000447216 FMNL1O95466 1100 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC4-203ENST00000447216 SLC4A3P48751 1232 aa20.84■□□□□ 0.93
TRAPPC4-203ENST00000447216 QRICH1Q2TAL8 776 aa20.84■□□□□ 0.93
TRAPPC4-203ENST00000447216 OTUD7BQ6GQQ9 843 aa20.84■□□□□ 0.93
TRAPPC4-203ENST00000447216 RRP36Q96EU6 259 aaKnown RBP20.84■□□□□ 0.93
TRAPPC4-203ENST00000447216 PARK7Q99497 189 aaKnown RBP20.84■□□□□ 0.93
TRAPPC4-203ENST00000447216 PAGR1Q9BTK6 254 aa20.84■□□□□ 0.93
TRAPPC4-203ENST00000447216 SLC38A10Q9HBR0 1119 aa20.84■□□□□ 0.93
TRAPPC4-203ENST00000447216 ZCCHC17Q9NP64 241 aaKnown RBP20.84■□□□□ 0.93
TRAPPC4-203ENST00000447216 ADAMTS5Q9UNA0 930 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms