RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 PALLDQ8WX93 1383 aa10.34□□□□□ -0.75
SMARCE1-206ENST00000447024 QSER1Q2KHR3 1735 aa10.33□□□□□ -0.76
SMARCE1-206ENST00000447024 CARNS1A5YM72 827 aa10.33□□□□□ -0.76
SMARCE1-206ENST00000447024 AOC2O75106 756 aa10.33□□□□□ -0.76
SMARCE1-206ENST00000447024 PAPLNO95428 1278 aa10.33□□□□□ -0.76
SMARCE1-206ENST00000447024 KIAA0319Q5VV43 1072 aa10.33□□□□□ -0.76
SMARCE1-206ENST00000447024 AEBP1Q8IUX7 1158 aa10.33□□□□□ -0.76
SMARCE1-206ENST00000447024 MTFR1LQ9H019 292 aa10.33□□□□□ -0.76
SMARCE1-206ENST00000447024 LGR6Q9HBX8 967 aa10.33□□□□□ -0.76
SMARCE1-206ENST00000447024 COL3A1P02461 1466 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-206ENST00000447024 ITPKAP23677 461 aa10.32□□□□□ -0.76
SMARCE1-206ENST00000447024 PPP2R1AP30153 589 aa10.32□□□□□ -0.76
SMARCE1-206ENST00000447024 PDE3AQ14432 1141 aa10.32□□□□□ -0.76
SMARCE1-206ENST00000447024 RALBP1Q15311 655 aa10.32□□□□□ -0.76
SMARCE1-206ENST00000447024 OGFOD3Q6PK18 319 aa10.32□□□□□ -0.76
SMARCE1-206ENST00000447024 TOGARAM1Q9Y4F4 1720 aa10.32□□□□□ -0.76
SMARCE1-206ENST00000447024 CASZ1Q86V15 1759 aa10.31□□□□□ -0.76
SMARCE1-206ENST00000447024 PLCL1Q15111 1095 aa10.31□□□□□ -0.76
SMARCE1-206ENST00000447024 CCDC82Q8N4S0 544 aa10.31□□□□□ -0.76
SMARCE1-206ENST00000447024 TFCP2L1Q9NZI6 479 aa10.31□□□□□ -0.76
SMARCE1-206ENST00000447024 PPP1R9AQ9ULJ8 1098 aa10.31□□□□□ -0.76
SMARCE1-206ENST00000447024 ZNF831Q5JPB2 1677 aa10.31□□□□□ -0.76
SMARCE1-206ENST00000447024 ZNF792Q3KQV3 632 aa10.3□□□□□ -0.76
SMARCE1-206ENST00000447024 SPRED2Q7Z698 418 aa10.3□□□□□ -0.76
SMARCE1-206ENST00000447024 STK11IPQ8N1F8 1099 aa10.3□□□□□ -0.76
SMARCE1-206ENST00000447024 EHD4Q9H223 541 aa10.3□□□□□ -0.76
SMARCE1-206ENST00000447024 U2SURPO15042 1029 aaKnown RBP10.29□□□□□ -0.76
SMARCE1-206ENST00000447024 HMOX1P09601 288 aa10.29□□□□□ -0.76
SMARCE1-206ENST00000447024 ZNF827Q17R98 1081 aa10.29□□□□□ -0.76
SMARCE1-206ENST00000447024 PNNQ9H307 717 aaKnown RBP10.29□□□□□ -0.76
SMARCE1-206ENST00000447024 NPHS2Q9NP85 383 aa10.29□□□□□ -0.76
SMARCE1-206ENST00000447024 KDM6AO15550 1401 aaPredicted RBP10.29□□□□□ -0.76
SMARCE1-206ENST00000447024 SYNGAP1Q96PV0 1343 aa10.29□□□□□ -0.76
SMARCE1-206ENST00000447024 SCN11AQ9UI33 1791 aa10.29□□□□□ -0.76
SMARCE1-206ENST00000447024 TAF1LQ8IZX4 1826 aa10.28□□□□□ -0.76
SMARCE1-206ENST00000447024 TMPRSS2O15393 492 aa10.28□□□□□ -0.76
SMARCE1-206ENST00000447024 AP3B2Q13367 1082 aa10.28□□□□□ -0.76
SMARCE1-206ENST00000447024 CYP27C1Q4G0S4 372 aa10.28□□□□□ -0.76
SMARCE1-206ENST00000447024 PPP1R1BQ9UD71 204 aaPredicted RBP10.28□□□□□ -0.76
SMARCE1-206ENST00000447024 BRPF3Q9ULD4 1205 aa10.28□□□□□ -0.76
SMARCE1-206ENST00000447024 ASAP1Q9ULH1 1129 aa10.28□□□□□ -0.76
SMARCE1-206ENST00000447024 MRC1P22897 1456 aa10.28□□□□□ -0.76
SMARCE1-206ENST00000447024 C5P01031 1676 aa10.28□□□□□ -0.76
SMARCE1-206ENST00000447024 GNAT3A8MTJ3 354 aa10.27□□□□□ -0.77
SMARCE1-206ENST00000447024 RNMTO43148 476 aaKnown RBP10.27□□□□□ -0.77
SMARCE1-206ENST00000447024 ICMTO60725 284 aa10.27□□□□□ -0.77
SMARCE1-206ENST00000447024 NEFMP07197 916 aa10.27□□□□□ -0.77
SMARCE1-206ENST00000447024 ORC1Q13415 861 aa10.27□□□□□ -0.77
SMARCE1-206ENST00000447024 MTHFSDQ2M296 383 aaKnown RBP10.27□□□□□ -0.77
SMARCE1-206ENST00000447024 SLC52A2Q9HAB3 445 aa10.27□□□□□ -0.77
SMARCE1-206ENST00000447024 EGFL7Q9UHF1 273 aa10.27□□□□□ -0.77
SMARCE1-206ENST00000447024 ADAMTS7Q9UKP4 1686 aa10.27□□□□□ -0.77
SMARCE1-206ENST00000447024 PNPLA7Q6ZV29 1317 aa10.27□□□□□ -0.77
SMARCE1-206ENST00000447024 MAP3K5Q99683 1374 aa10.26□□□□□ -0.77
SMARCE1-206ENST00000447024 HTATSF1O43719 755 aaKnown RBP10.26□□□□□ -0.77
SMARCE1-206ENST00000447024 ZBTB7AO95365 584 aa10.26□□□□□ -0.77
SMARCE1-206ENST00000447024 NEFLP07196 543 aa10.26□□□□□ -0.77
SMARCE1-206ENST00000447024 U2AF1L5P0DN76 240 aaPredicted RBP10.26□□□□□ -0.77
SMARCE1-206ENST00000447024 U2AF1Q01081 240 aaKnown RBP eCLIP10.26□□□□□ -0.77
SMARCE1-206ENST00000447024 PTPN12Q05209 780 aaKnown RBP10.26□□□□□ -0.77
SMARCE1-206ENST00000447024 BNIP3Q12983 259 aa10.26□□□□□ -0.77
SMARCE1-206ENST00000447024 CDK5R2Q13319 367 aa10.26□□□□□ -0.77
SMARCE1-206ENST00000447024 CNGB1Q14028 1251 aaPredicted RBP10.26□□□□□ -0.77
SMARCE1-206ENST00000447024 MISP3Q96FF7 219 aa10.26□□□□□ -0.77
SMARCE1-206ENST00000447024 WDR89Q96FK6 387 aaPredicted RBP10.26□□□□□ -0.77
SMARCE1-206ENST00000447024 ABCB6Q9NP58 842 aa10.26□□□□□ -0.77
SMARCE1-206ENST00000447024 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.26□□□□□ -0.77
SMARCE1-206ENST00000447024 C4BP0C0L5 1744 aa10.25□□□□□ -0.77
SMARCE1-206ENST00000447024 COL24A1Q17RW2 1714 aa10.25□□□□□ -0.77
SMARCE1-206ENST00000447024 CPNE3O75131 537 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-206ENST00000447024 FAM87AP0C7U9 286 aa10.25□□□□□ -0.77
SMARCE1-206ENST00000447024 LIG1P18858 919 aa10.25□□□□□ -0.77
SMARCE1-206ENST00000447024 POLD1P28340 1107 aa10.25□□□□□ -0.77
SMARCE1-206ENST00000447024 PRKAR2BP31323 418 aa10.25□□□□□ -0.77
SMARCE1-206ENST00000447024 DDX10Q13206 875 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-206ENST00000447024 PLD6Q8N2A8 252 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-206ENST00000447024 CCDC86Q9H6F5 360 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-206ENST00000447024 CRIM1Q9NZV1 1036 aa10.25□□□□□ -0.77
SMARCE1-206ENST00000447024 CNTNAP4Q9C0A0 1308 aa10.25□□□□□ -0.77
SMARCE1-206ENST00000447024 CICQ96RK0 1608 aaPredicted RBP10.25□□□□□ -0.77
SMARCE1-206ENST00000447024 H3BRB1 525 aa10.24□□□□□ -0.77
SMARCE1-206ENST00000447024 BIN1O00499 593 aa10.24□□□□□ -0.77
SMARCE1-206ENST00000447024 TEFQ10587 303 aa10.24□□□□□ -0.77
SMARCE1-206ENST00000447024 ECM1Q16610 540 aa10.24□□□□□ -0.77
SMARCE1-206ENST00000447024 FAM181AQ8N9Y4 354 aa10.24□□□□□ -0.77
SMARCE1-206ENST00000447024 PDGFDQ9GZP0 370 aaPredicted RBP10.24□□□□□ -0.77
SMARCE1-206ENST00000447024 TUT1Q9H6E5 874 aaKnown RBP10.24□□□□□ -0.77
SMARCE1-206ENST00000447024 MYBBP1AQ9BQG0 1328 aaKnown RBP10.24□□□□□ -0.77
SMARCE1-206ENST00000447024 CEMIPQ8WUJ3 1361 aa10.24□□□□□ -0.77
SMARCE1-206ENST00000447024 TUBGCP6Q96RT7 1819 aa10.23□□□□□ -0.77
SMARCE1-206ENST00000447024 ZNF648Q5T619 568 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-206ENST00000447024 PRPF40BQ6NWY9 871 aaKnown RBP10.23□□□□□ -0.77
SMARCE1-206ENST00000447024 COL23A1Q86Y22 540 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-206ENST00000447024 NETO1Q8TDF5 533 aa10.23□□□□□ -0.77
SMARCE1-206ENST00000447024 RTF1Q92541 710 aaKnown RBP10.23□□□□□ -0.77
SMARCE1-206ENST00000447024 FANCD2OSQ96PS1 177 aa10.23□□□□□ -0.77
SMARCE1-206ENST00000447024 FAM129BQ96TA1 746 aa10.23□□□□□ -0.77
SMARCE1-206ENST00000447024 TEX13AQ9BXU3 409 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-206ENST00000447024 ZC3H12CQ9C0D7 883 aaKnown RBP10.23□□□□□ -0.77
SMARCE1-206ENST00000447024 ATXN3LQ9H3M9 355 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms