RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 KLHL30Q0D2K2 578 aa19.74■□□□□ 0.75
ATG9A-215ENST00000446716 ARHGAP44Q17R89 818 aa19.74■□□□□ 0.75
ATG9A-215ENST00000446716 MKRN3Q13064 507 aaKnown RBP19.74■□□□□ 0.75
ATG9A-215ENST00000446716 SLC27A3Q5K4L6 730 aa19.74■□□□□ 0.75
ATG9A-215ENST00000446716 ADALQ6DHV7 355 aa19.74■□□□□ 0.75
ATG9A-215ENST00000446716 SYT10Q6XYQ8 523 aa19.74■□□□□ 0.75
ATG9A-215ENST00000446716 CDC42BPGQ6DT37 1551 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 M0R2C6 588 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 UBXN2AP68543 259 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 SHROOM2Q13796 1616 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 H7C1W4 665 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 GNA14O95837 355 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 SLC16A2P36021 539 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 LRMPQ12912 555 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 RASGRF1Q13972 1273 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 CCDC125Q86Z20 511 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 TRMT44Q8IYL2 757 aaKnown RBP19.73■□□□□ 0.75
ATG9A-215ENST00000446716 USTQ9Y2C2 406 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 COL4A3BPQ9Y5P4 624 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 XRCC5P13010 732 aaKnown RBP19.73■□□□□ 0.75
ATG9A-215ENST00000446716 TXNRD1Q16881 649 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 UBL4BQ8N7F7 174 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 RIOK1Q9BRS2 568 aaKnown RBP19.73■□□□□ 0.75
ATG9A-215ENST00000446716 JCADQ9P266 1359 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 MECOMQ03112 1051 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 GPIHBP1Q8IV16 184 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 GOLGA5Q8TBA6 731 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 ST7Q9NRC1 585 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 RTEL1Q9NZ71 1219 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 OVOS2A0A0G2JMS6 1433 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 OVOS2A0A0J9YW53 1432 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 OVOS2Q6IE36 1432 aa19.73■□□□□ 0.75
ATG9A-215ENST00000446716 TLDC2A0PJX2 215 aa19.72■□□□□ 0.75
ATG9A-215ENST00000446716 LRCH2Q5VUJ6 765 aa19.72■□□□□ 0.75
ATG9A-215ENST00000446716 FOXP4Q8IVH2 680 aaPredicted RBP19.72■□□□□ 0.75
ATG9A-215ENST00000446716 IPO4Q8TEX9 1081 aaKnown RBP19.72■□□□□ 0.75
ATG9A-215ENST00000446716 USP28Q96RU2 1077 aa19.72■□□□□ 0.75
ATG9A-215ENST00000446716 COL15A1P39059 1388 aa19.72■□□□□ 0.75
ATG9A-215ENST00000446716 STK10O94804 968 aaKnown RBP19.72■□□□□ 0.75
ATG9A-215ENST00000446716 TNNC2P02585 160 aa19.72■□□□□ 0.75
ATG9A-215ENST00000446716 STAT2P52630 851 aa19.72■□□□□ 0.75
ATG9A-215ENST00000446716 DMP1Q13316 513 aaPredicted RBP19.72■□□□□ 0.75
ATG9A-215ENST00000446716 CCDC26Q8TAB7 109 aa19.72■□□□□ 0.75
ATG9A-215ENST00000446716 ATP6V0A1Q93050 837 aa19.72■□□□□ 0.75
ATG9A-215ENST00000446716 OPA1O60313 960 aa19.72■□□□□ 0.75
ATG9A-215ENST00000446716 PFKFB1P16118 471 aa19.72■□□□□ 0.75
ATG9A-215ENST00000446716 TUBB4BP68371 445 aa19.72■□□□□ 0.75
ATG9A-215ENST00000446716 PNOCQ13519 176 aa19.72■□□□□ 0.75
ATG9A-215ENST00000446716 CFAP58Q5T655 872 aa19.72■□□□□ 0.75
ATG9A-215ENST00000446716 APOA5Q6Q788 366 aa19.72■□□□□ 0.75
ATG9A-215ENST00000446716 MAGEA1P43355 309 aa19.72■□□□□ 0.75
ATG9A-215ENST00000446716 RAB3IL1Q8TBN0 382 aa19.72■□□□□ 0.75
ATG9A-215ENST00000446716 SMIM23A6NLE4 172 aa19.71■□□□□ 0.75
ATG9A-215ENST00000446716 CYP21A2P08686 494 aa19.71■□□□□ 0.75
ATG9A-215ENST00000446716 ZNF365Q70YC5 407 aa19.71■□□□□ 0.75
ATG9A-215ENST00000446716 ARHGEF1Q92888 912 aaKnown RBP19.71■□□□□ 0.75
ATG9A-215ENST00000446716 SEPT14Q6ZU15 432 aa19.71■□□□□ 0.75
ATG9A-215ENST00000446716 PLA2R1Q13018 1463 aa19.71■□□□□ 0.75
ATG9A-215ENST00000446716 NCAPD2Q15021 1401 aa19.71■□□□□ 0.75
ATG9A-215ENST00000446716 RSPH3Q86UC2 560 aa19.71■□□□□ 0.75
ATG9A-215ENST00000446716 RNF26Q9BY78 433 aaPredicted RBP19.71■□□□□ 0.75
ATG9A-215ENST00000446716 FAM207AQ9NSI2 230 aaPredicted RBP19.71■□□□□ 0.75
ATG9A-215ENST00000446716 STIM2Q9P246 746 aa19.71■□□□□ 0.75
ATG9A-215ENST00000446716 C6orf163Q5TEZ5 329 aa19.71■□□□□ 0.75
ATG9A-215ENST00000446716 NSMCE1Q8WV22 266 aa19.71■□□□□ 0.75
ATG9A-215ENST00000446716 LSG1Q9H089 658 aaKnown RBP19.71■□□□□ 0.75
ATG9A-215ENST00000446716 ATF7P17544 494 aaPredicted RBP19.7■□□□□ 0.74
ATG9A-215ENST00000446716 PTGDRQ13258 359 aa19.7■□□□□ 0.74
ATG9A-215ENST00000446716 DYNLL2Q96FJ2 89 aa19.7■□□□□ 0.74
ATG9A-215ENST00000446716 NLRC4Q9NPP4 1024 aa19.7■□□□□ 0.74
ATG9A-215ENST00000446716 PANK4Q9NVE7 773 aa19.7■□□□□ 0.74
ATG9A-215ENST00000446716 ZHX1Q9UKY1 873 aaPredicted RBP19.7■□□□□ 0.74
ATG9A-215ENST00000446716 SFMBT2Q5VUG0 894 aa19.7■□□□□ 0.74
ATG9A-215ENST00000446716 PUS7LQ9H0K6 701 aaKnown RBP19.7■□□□□ 0.74
ATG9A-215ENST00000446716 CBX8Q9HC52 389 aa19.7■□□□□ 0.74
ATG9A-215ENST00000446716 MMS19Q96T76 1030 aa19.7■□□□□ 0.74
ATG9A-215ENST00000446716 NSRP1Q9H0G5 558 aaKnown RBP19.7■□□□□ 0.74
ATG9A-215ENST00000446716 GADD45BO75293 160 aaPredicted RBP19.7■□□□□ 0.74
ATG9A-215ENST00000446716 RHOXF2BP0C7M4 288 aa19.7■□□□□ 0.74
ATG9A-215ENST00000446716 EN1Q05925 392 aaPredicted RBP19.7■□□□□ 0.74
ATG9A-215ENST00000446716 ZNF589Q86UQ0 364 aaPredicted RBP19.7■□□□□ 0.74
ATG9A-215ENST00000446716 RHOXF2Q9BQY4 288 aa19.7■□□□□ 0.74
ATG9A-215ENST00000446716 ZNF577Q9BSK1 485 aa19.7■□□□□ 0.74
ATG9A-215ENST00000446716 RABGAP1Q9Y3P9 1069 aa19.7■□□□□ 0.74
ATG9A-215ENST00000446716 TMEM191BP0C7N4 346 aa19.69■□□□□ 0.74
ATG9A-215ENST00000446716 TFDP1Q14186 410 aa19.69■□□□□ 0.74
ATG9A-215ENST00000446716 PPP1R21Q6ZMI0 780 aa19.69■□□□□ 0.74
ATG9A-215ENST00000446716 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.69■□□□□ 0.74
ATG9A-215ENST00000446716 GPR161Q8N6U8 529 aaKnown RBP19.69■□□□□ 0.74
ATG9A-215ENST00000446716 ARMCX3Q9UH62 379 aaPredicted RBP19.69■□□□□ 0.74
ATG9A-215ENST00000446716 ZBTB24O43167 697 aaPredicted RBP19.69■□□□□ 0.74
ATG9A-215ENST00000446716 OSBP2Q969R2 916 aa19.69■□□□□ 0.74
ATG9A-215ENST00000446716 JPH2Q9BR39 696 aaPredicted RBP19.69■□□□□ 0.74
ATG9A-215ENST00000446716 MED10Q9BTT4 135 aa19.69■□□□□ 0.74
ATG9A-215ENST00000446716 KCNQ2O43526 872 aa19.69■□□□□ 0.74
ATG9A-215ENST00000446716 BRD1O95696 1058 aa19.69■□□□□ 0.74
ATG9A-215ENST00000446716 ARMCX5Q6P1M9 558 aa19.69■□□□□ 0.74
ATG9A-215ENST00000446716 SLC7A3Q8WY07 619 aa19.69■□□□□ 0.74
ATG9A-215ENST00000446716 SEPT9Q9UHD8 586 aaPredicted RBP19.69■□□□□ 0.74
ATG9A-215ENST00000446716 CARMIL3Q8ND23 1372 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms