RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 CATIPQ7Z7H3 387 aa20.11■□□□□ 0.81
LIME1-202ENST00000444951 CCDC144CPQ8IYA2 1237 aa20.11■□□□□ 0.81
LIME1-202ENST00000444951 ZNF654Q8IZM8 581 aa20.11■□□□□ 0.81
LIME1-202ENST00000444951 TMTC2Q8N394 836 aa20.11■□□□□ 0.81
LIME1-202ENST00000444951 KIAA1683Q9H0B3 1180 aa20.11■□□□□ 0.81
LIME1-202ENST00000444951 TMOD4Q9NZQ9 345 aa20.11■□□□□ 0.81
LIME1-202ENST00000444951 SLC12A7Q9Y666 1083 aa20.11■□□□□ 0.81
LIME1-202ENST00000444951 F5H6K3 240 aa20.1■□□□□ 0.81
LIME1-202ENST00000444951 H0YGN5 161 aa20.1■□□□□ 0.81
LIME1-202ENST00000444951 RXRAP19793 462 aa20.1■□□□□ 0.81
LIME1-202ENST00000444951 USP14P54578 494 aa20.1■□□□□ 0.81
LIME1-202ENST00000444951 KLRC3Q07444 240 aa20.1■□□□□ 0.81
LIME1-202ENST00000444951 CCDC96Q2M329 555 aa20.1■□□□□ 0.81
LIME1-202ENST00000444951 SH3D19Q5HYK7 790 aa20.1■□□□□ 0.81
LIME1-202ENST00000444951 USP17L2Q6R6M4 530 aa20.1■□□□□ 0.81
LIME1-202ENST00000444951 NUP88Q99567 741 aaPredicted RBP20.1■□□□□ 0.81
LIME1-202ENST00000444951 ASCC2Q9H1I8 757 aaPredicted RBP20.1■□□□□ 0.81
LIME1-202ENST00000444951 VCPKMTQ9H867 229 aa20.1■□□□□ 0.81
LIME1-202ENST00000444951 EMILIN3Q9NT22 766 aa20.1■□□□□ 0.81
LIME1-202ENST00000444951 RANBP2P49792 3224 aaKnown RBP20.1■□□□□ 0.81
LIME1-202ENST00000444951 TRIOBPQ9H2D6 2365 aa20.09■□□□□ 0.81
LIME1-202ENST00000444951 PLXNB2O15031 1838 aa20.09■□□□□ 0.81
LIME1-202ENST00000444951 GOLGA8BA8MQT2 603 aa20.09■□□□□ 0.81
LIME1-202ENST00000444951 C19orf81C9J6K1 198 aa20.09■□□□□ 0.81
LIME1-202ENST00000444951 PEX10O60683 326 aa20.09■□□□□ 0.81
LIME1-202ENST00000444951 NDUFB10O96000 172 aa20.09■□□□□ 0.81
LIME1-202ENST00000444951 INHAP05111 366 aa20.09■□□□□ 0.81
LIME1-202ENST00000444951 UBXN2AP68543 259 aa20.09■□□□□ 0.81
LIME1-202ENST00000444951 STK3Q13188 491 aa20.09■□□□□ 0.81
LIME1-202ENST00000444951 ANKRD1Q15327 319 aa20.09■□□□□ 0.81
LIME1-202ENST00000444951 FAM110CQ1W6H9 321 aa20.09■□□□□ 0.81
LIME1-202ENST00000444951 SAMD1Q6SPF0 538 aaPredicted RBP20.09■□□□□ 0.81
LIME1-202ENST00000444951 MICU3Q86XE3 530 aa20.09■□□□□ 0.81
LIME1-202ENST00000444951 PNMA3Q9UL41 463 aa20.09■□□□□ 0.81
LIME1-202ENST00000444951 COLQQ9Y215 455 aaPredicted RBP20.09■□□□□ 0.81
LIME1-202ENST00000444951 FRMPD2Q68DX3 1309 aaPredicted RBP20.08■□□□□ 0.81
LIME1-202ENST00000444951 IRF5Q13568 498 aa20.08■□□□□ 0.81
LIME1-202ENST00000444951 APOA5Q6Q788 366 aa20.08■□□□□ 0.81
LIME1-202ENST00000444951 SGMS1Q86VZ5 419 aa20.08■□□□□ 0.81
LIME1-202ENST00000444951 GMCL1P1Q8NEA9 526 aa20.08■□□□□ 0.81
LIME1-202ENST00000444951 U2AF1L4Q8WU68 220 aaKnown RBP20.08■□□□□ 0.81
LIME1-202ENST00000444951 AGXT2Q9BYV1 514 aa20.08■□□□□ 0.81
LIME1-202ENST00000444951 ALDH8A1Q9H2A2 487 aaPredicted RBP20.08■□□□□ 0.81
LIME1-202ENST00000444951 GPCPD1Q9NPB8 672 aa20.08■□□□□ 0.81
LIME1-202ENST00000444951 ZBTB43O43298 467 aa20.07■□□□□ 0.8
LIME1-202ENST00000444951 CD2BP2O95400 341 aaKnown RBP20.07■□□□□ 0.8
LIME1-202ENST00000444951 GOLGA8HP0CJ92 632 aa20.07■□□□□ 0.8
LIME1-202ENST00000444951 SLC1A4P43007 532 aa20.07■□□□□ 0.8
LIME1-202ENST00000444951 FAM83BQ5T0W9 1011 aa20.07■□□□□ 0.8
LIME1-202ENST00000444951 KCTD1Q719H9 257 aa20.07■□□□□ 0.8
LIME1-202ENST00000444951 PCDH10Q9P2E7 1040 aa20.07■□□□□ 0.8
LIME1-202ENST00000444951 TPCN1Q9ULQ1 816 aa20.07■□□□□ 0.8
LIME1-202ENST00000444951 GOLGA8AA7E2F4 631 aa20.06■□□□□ 0.8
LIME1-202ENST00000444951 PDHBP11177 359 aa20.06■□□□□ 0.8
LIME1-202ENST00000444951 VCAM1P19320 739 aa20.06■□□□□ 0.8
LIME1-202ENST00000444951 CCT2P78371 535 aaKnown RBP20.06■□□□□ 0.8
LIME1-202ENST00000444951 IKQ13123 557 aaPredicted RBP20.06■□□□□ 0.8
LIME1-202ENST00000444951 FBXL16Q8N461 479 aa20.06■□□□□ 0.8
LIME1-202ENST00000444951 PXYLP1Q8TE99 480 aa20.06■□□□□ 0.8
LIME1-202ENST00000444951 TANGO6Q9C0B7 1094 aa20.06■□□□□ 0.8
LIME1-202ENST00000444951 RPAP3Q9H6T3 665 aaPredicted RBP20.06■□□□□ 0.8
LIME1-202ENST00000444951 SYNPO2Q9UMS6 1093 aa20.06■□□□□ 0.8
LIME1-202ENST00000444951 SZT2Q5T011 3432 aa20.06■□□□□ 0.8
LIME1-202ENST00000444951 DDAH1O94760 285 aa20.05■□□□□ 0.8
LIME1-202ENST00000444951 PARP1P09874 1014 aaKnown RBP20.05■□□□□ 0.8
LIME1-202ENST00000444951 BMP3P12645 472 aa20.05■□□□□ 0.8
LIME1-202ENST00000444951 GCLCP48506 637 aaPredicted RBP20.05■□□□□ 0.8
LIME1-202ENST00000444951 METAP2P50579 478 aaKnown RBP eCLIP20.05■□□□□ 0.8
LIME1-202ENST00000444951 FXR1P51114 621 aaKnown RBP eCLIP20.05■□□□□ 0.8
LIME1-202ENST00000444951 TROAPQ12815 778 aa20.05■□□□□ 0.8
LIME1-202ENST00000444951 CTCFLQ8NI51 663 aaPredicted RBP20.05■□□□□ 0.8
LIME1-202ENST00000444951 DCAF4Q8WV16 495 aa20.05■□□□□ 0.8
LIME1-202ENST00000444951 LPAR1Q92633 364 aa20.05■□□□□ 0.8
LIME1-202ENST00000444951 COA7Q96BR5 231 aa20.05■□□□□ 0.8
LIME1-202ENST00000444951 P2RX7Q99572 595 aaKnown RBP20.05■□□□□ 0.8
LIME1-202ENST00000444951 TXNRD2Q9NNW7 524 aa20.05■□□□□ 0.8
LIME1-202ENST00000444951 GJD2Q9UKL4 321 aa20.05■□□□□ 0.8
LIME1-202ENST00000444951 LARGE1O95461 756 aa20.04■□□□□ 0.8
LIME1-202ENST00000444951 SGPL1O95470 568 aa20.04■□□□□ 0.8
LIME1-202ENST00000444951 CALM1P0DP23 149 aa20.04■□□□□ 0.8
LIME1-202ENST00000444951 CALM2P0DP24 149 aa20.04■□□□□ 0.8
LIME1-202ENST00000444951 CALM3P0DP25 149 aa20.04■□□□□ 0.8
LIME1-202ENST00000444951 PDIA3P30101 505 aaKnown RBP20.04■□□□□ 0.8
LIME1-202ENST00000444951 TRIM32Q13049 653 aa20.04■□□□□ 0.8
LIME1-202ENST00000444951 PABPC4Q13310 644 aaKnown RBP eCLIP20.04■□□□□ 0.8
LIME1-202ENST00000444951 POTEEQ6S8J3 1075 aa20.04■□□□□ 0.8
LIME1-202ENST00000444951 GMCL1Q96IK5 515 aa20.04■□□□□ 0.8
LIME1-202ENST00000444951 C12orf42Q96LP6 360 aa20.04■□□□□ 0.8
LIME1-202ENST00000444951 NCOA5Q9HCD5 579 aaKnown RBP20.04■□□□□ 0.8
LIME1-202ENST00000444951 MORF4L1Q9UBU8 362 aa20.04■□□□□ 0.8
LIME1-202ENST00000444951 LIMCH1Q9UPQ0 1083 aa20.04■□□□□ 0.8
LIME1-202ENST00000444951 TMEM232C9JQI7 657 aa20.03■□□□□ 0.8
LIME1-202ENST00000444951 WDR46O15213 610 aaKnown RBP20.03■□□□□ 0.8
LIME1-202ENST00000444951 FARP2O94887 1054 aaPredicted RBP20.03■□□□□ 0.8
LIME1-202ENST00000444951 ZNF543Q08ER8 600 aa20.03■□□□□ 0.8
LIME1-202ENST00000444951 GRM4Q14833 912 aa20.03■□□□□ 0.8
LIME1-202ENST00000444951 RTN1Q16799 776 aa20.03■□□□□ 0.8
LIME1-202ENST00000444951 TTBK2Q6IQ55 1244 aa20.03■□□□□ 0.8
LIME1-202ENST00000444951 STAG2Q8N3U4 1231 aa20.03■□□□□ 0.8
LIME1-202ENST00000444951 NECAB1Q8N987 351 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms