RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 PPP1R12CQ9BZL4 782 aa12.25□□□□□ -0.45
COMMD1-203ENST00000444166 UPF3AQ9H1J1 476 aaKnown RBP12.25□□□□□ -0.45
COMMD1-203ENST00000444166 C11orf16Q9NQ32 467 aa12.25□□□□□ -0.45
COMMD1-203ENST00000444166 TLR7Q9NYK1 1049 aaKnown RBP12.25□□□□□ -0.45
COMMD1-203ENST00000444166 FAM184BQ9ULE4 1060 aa12.25□□□□□ -0.45
COMMD1-203ENST00000444166 A0A0U1RQG5 324 aaPredicted RBP12.24□□□□□ -0.45
COMMD1-203ENST00000444166 VWA5AO00534 786 aa12.24□□□□□ -0.45
COMMD1-203ENST00000444166 POLR3DP05423 398 aaPredicted RBP12.24□□□□□ -0.45
COMMD1-203ENST00000444166 ASGR1P07306 291 aa12.24□□□□□ -0.45
COMMD1-203ENST00000444166 POU3F3P20264 500 aaPredicted RBP12.24□□□□□ -0.45
COMMD1-203ENST00000444166 CYP2C18P33260 490 aa12.24□□□□□ -0.45
COMMD1-203ENST00000444166 STAT3P40763 770 aa12.24□□□□□ -0.45
COMMD1-203ENST00000444166 TMEM31Q5JXX7 168 aa12.24□□□□□ -0.45
COMMD1-203ENST00000444166 ANTXR1Q9H6X2 564 aa12.24□□□□□ -0.45
COMMD1-203ENST00000444166 FBXO28Q9NVF7 368 aa12.24□□□□□ -0.45
COMMD1-203ENST00000444166 DNAJC25-GNG10A0A024R161 153 aa12.23□□□□□ -0.45
COMMD1-203ENST00000444166 CTAGE5O15320 804 aa12.23□□□□□ -0.45
COMMD1-203ENST00000444166 FGBP02675 491 aa12.23□□□□□ -0.45
COMMD1-203ENST00000444166 COPB2P35606 906 aa12.23□□□□□ -0.45
COMMD1-203ENST00000444166 GJA9P57773 515 aa12.23□□□□□ -0.45
COMMD1-203ENST00000444166 NKX3-2P78367 333 aa12.23□□□□□ -0.45
COMMD1-203ENST00000444166 ICA1Q05084 483 aa12.23□□□□□ -0.45
COMMD1-203ENST00000444166 SLC43A3Q8NBI5 491 aa12.23□□□□□ -0.45
COMMD1-203ENST00000444166 PCSK9Q8NBP7 692 aaKnown RBP12.23□□□□□ -0.45
COMMD1-203ENST00000444166 VWCEQ96DN2 955 aa12.23□□□□□ -0.45
COMMD1-203ENST00000444166 MTIF3Q9H2K0 278 aaKnown RBP12.23□□□□□ -0.45
COMMD1-203ENST00000444166 SH2D4AQ9H788 454 aa12.23□□□□□ -0.45
COMMD1-203ENST00000444166 ARHGEF10LQ9HCE6 1279 aa12.23□□□□□ -0.45
COMMD1-203ENST00000444166 MCM9Q9NXL9 1143 aa12.23□□□□□ -0.45
COMMD1-203ENST00000444166 PPP1R9AQ9ULJ8 1098 aa12.23□□□□□ -0.45
COMMD1-203ENST00000444166 MCM3APO60318 1980 aa12.23□□□□□ -0.45
COMMD1-203ENST00000444166 UMODL1Q5DID0 1318 aa12.22□□□□□ -0.45
COMMD1-203ENST00000444166 APBB1O00213 710 aa12.22□□□□□ -0.45
COMMD1-203ENST00000444166 TLL1O43897 1013 aa12.22□□□□□ -0.45
COMMD1-203ENST00000444166 GPR37L1O60883 481 aa12.22□□□□□ -0.45
COMMD1-203ENST00000444166 C6orf222P0C671 652 aaPredicted RBP12.22□□□□□ -0.45
COMMD1-203ENST00000444166 CYP2D6P10635 497 aa12.22□□□□□ -0.45
COMMD1-203ENST00000444166 AKR1B1P15121 316 aa12.22□□□□□ -0.45
COMMD1-203ENST00000444166 MYOGP15173 224 aa12.22□□□□□ -0.45
COMMD1-203ENST00000444166 RABGGTBP53611 331 aa12.22□□□□□ -0.45
COMMD1-203ENST00000444166 RARSP54136 660 aaKnown RBP12.22□□□□□ -0.45
COMMD1-203ENST00000444166 PPP2R2DQ66LE6 453 aa12.22□□□□□ -0.45
COMMD1-203ENST00000444166 SAMD1Q6SPF0 538 aaPredicted RBP12.22□□□□□ -0.45
COMMD1-203ENST00000444166 OTOP2Q7RTS6 562 aa12.22□□□□□ -0.45
COMMD1-203ENST00000444166 ZNF467Q7Z7K2 595 aaPredicted RBP12.22□□□□□ -0.45
COMMD1-203ENST00000444166 MICALL1Q8N3F8 863 aa12.22□□□□□ -0.45
COMMD1-203ENST00000444166 SSH3Q8TE77 659 aa12.22□□□□□ -0.45
COMMD1-203ENST00000444166 KHSRPQ92945 711 aaKnown RBP eCLIP12.22□□□□□ -0.45
COMMD1-203ENST00000444166 FGD4Q96M96 766 aa12.22□□□□□ -0.45
COMMD1-203ENST00000444166 DCP1AQ9NPI6 582 aaPredicted RBP12.22□□□□□ -0.45
COMMD1-203ENST00000444166 SWAP70Q9UH65 585 aa12.22□□□□□ -0.45
COMMD1-203ENST00000444166 ZHX1Q9UKY1 873 aaPredicted RBP12.22□□□□□ -0.45
COMMD1-203ENST00000444166 PCDHA11Q9Y5I1 949 aa12.22□□□□□ -0.45
COMMD1-203ENST00000444166 MTCH2Q9Y6C9 303 aa12.22□□□□□ -0.45
COMMD1-203ENST00000444166 LRRC37A2A6NM11 1700 aa12.21□□□□□ -0.45
COMMD1-203ENST00000444166 MAGEB6P1A0A0J9YX57 407 aa12.21□□□□□ -0.45
COMMD1-203ENST00000444166 TLR3O15455 904 aaKnown RBP12.21□□□□□ -0.45
COMMD1-203ENST00000444166 ACVR2BQ13705 512 aa12.21□□□□□ -0.45
COMMD1-203ENST00000444166 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.21□□□□□ -0.45
COMMD1-203ENST00000444166 EAF2Q96CJ1 260 aaPredicted RBP12.21□□□□□ -0.45
COMMD1-203ENST00000444166 DYNLL2Q96FJ2 89 aa12.21□□□□□ -0.45
COMMD1-203ENST00000444166 NOC4LQ9BVI4 516 aaKnown RBP12.21□□□□□ -0.45
COMMD1-203ENST00000444166 CRNKL1Q9BZJ0 848 aaKnown RBP12.21□□□□□ -0.45
COMMD1-203ENST00000444166 CCDC8Q9H0W5 538 aaPredicted RBP12.21□□□□□ -0.45
COMMD1-203ENST00000444166 WNT8AQ9H1J5 351 aa12.21□□□□□ -0.45
COMMD1-203ENST00000444166 HIPK3Q9H422 1215 aa12.21□□□□□ -0.45
COMMD1-203ENST00000444166 MYH8P13535 1937 aa12.2□□□□□ -0.46
COMMD1-203ENST00000444166 TRIM27P14373 513 aa12.2□□□□□ -0.46
COMMD1-203ENST00000444166 OS9Q13438 667 aaPredicted RBP12.2□□□□□ -0.46
COMMD1-203ENST00000444166 CCDC144BQ3MJ40 725 aa12.2□□□□□ -0.46
COMMD1-203ENST00000444166 GNASQ5JWF2 1037 aa12.2□□□□□ -0.46
COMMD1-203ENST00000444166 SDR42E1Q8WUS8 393 aa12.2□□□□□ -0.46
COMMD1-203ENST00000444166 VTI1AQ96AJ9 217 aa12.2□□□□□ -0.46
COMMD1-203ENST00000444166 TEX13BQ9BXU2 312 aa12.2□□□□□ -0.46
COMMD1-203ENST00000444166 KATNBL1Q9H079 304 aa12.2□□□□□ -0.46
COMMD1-203ENST00000444166 SPC25Q9HBM1 224 aa12.2□□□□□ -0.46
COMMD1-203ENST00000444166 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.2□□□□□ -0.46
COMMD1-203ENST00000444166 COG5Q9UP83 839 aa12.2□□□□□ -0.46
COMMD1-203ENST00000444166 TNNQ9UQP3 1299 aa12.2□□□□□ -0.46
COMMD1-203ENST00000444166 NOP58Q9Y2X3 529 aaKnown RBP12.2□□□□□ -0.46
COMMD1-203ENST00000444166 RIPK3Q9Y572 518 aa12.2□□□□□ -0.46
COMMD1-203ENST00000444166 SLC4A7Q9Y6M7 1214 aa12.2□□□□□ -0.46
COMMD1-203ENST00000444166 GRIN2DO15399 1336 aa12.19□□□□□ -0.46
COMMD1-203ENST00000444166 EPOPA6NHQ4 379 aa12.19□□□□□ -0.46
COMMD1-203ENST00000444166 SMIM22K7EJ46 135 aa12.19□□□□□ -0.46
COMMD1-203ENST00000444166 SURF6O75683 361 aaKnown RBP12.19□□□□□ -0.46
COMMD1-203ENST00000444166 EEF2P13639 858 aaKnown RBP12.19□□□□□ -0.46
COMMD1-203ENST00000444166 PDE6AP16499 860 aa12.19□□□□□ -0.46
COMMD1-203ENST00000444166 SKIV2LQ15477 1246 aaKnown RBP12.19□□□□□ -0.46
COMMD1-203ENST00000444166 CCDC17Q96LX7 622 aa12.19□□□□□ -0.46
COMMD1-203ENST00000444166 ABHD16BQ9H3Z7 469 aa12.19□□□□□ -0.46
COMMD1-203ENST00000444166 ASTN1O14525 1302 aa12.18□□□□□ -0.46
COMMD1-203ENST00000444166 TCRBV5S4A2TA0A5A2 114 aa12.18□□□□□ -0.46
COMMD1-203ENST00000444166 FAM86C2PA6NEL3 165 aa12.18□□□□□ -0.46
COMMD1-203ENST00000444166 RFXAPO00287 272 aa12.18□□□□□ -0.46
COMMD1-203ENST00000444166 ATP2A1O14983 1001 aa12.18□□□□□ -0.46
COMMD1-203ENST00000444166 ATP2A2P16615 1042 aaKnown RBP12.18□□□□□ -0.46
COMMD1-203ENST00000444166 CCL23P55773 120 aa12.18□□□□□ -0.46
COMMD1-203ENST00000444166 ATP8B2P98198 1209 aa12.18□□□□□ -0.46
COMMD1-203ENST00000444166 FAM83BQ5T0W9 1011 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms