RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 SALL3Q9BXA9 1300 aa19.41■□□□□ 0.7
CTDSP1-204ENST00000443891 AKR1A1P14550 325 aa19.4■□□□□ 0.7
CTDSP1-204ENST00000443891 RTP1P59025 263 aa19.4■□□□□ 0.7
CTDSP1-204ENST00000443891 HDAC1Q13547 482 aaPredicted RBP19.4■□□□□ 0.7
CTDSP1-204ENST00000443891 SNRNP48Q6IEG0 339 aaKnown RBP19.4■□□□□ 0.7
CTDSP1-204ENST00000443891 MAMDC4Q6UXC1 1216 aa19.4■□□□□ 0.7
CTDSP1-204ENST00000443891 RNF180Q86T96 592 aa19.4■□□□□ 0.7
CTDSP1-204ENST00000443891 CHST13Q8NET6 341 aa19.4■□□□□ 0.7
CTDSP1-204ENST00000443891 DDX11Q96FC9 970 aa19.4■□□□□ 0.7
CTDSP1-204ENST00000443891 SLC38A10Q9HBR0 1119 aa19.4■□□□□ 0.7
CTDSP1-204ENST00000443891 DNAJC25-GNG10A0A024R161 153 aa19.39■□□□□ 0.69
CTDSP1-204ENST00000443891 PLA2G6O60733 806 aa19.39■□□□□ 0.69
CTDSP1-204ENST00000443891 PRDM1O75626 825 aa19.39■□□□□ 0.69
CTDSP1-204ENST00000443891 PGK2P07205 417 aa19.39■□□□□ 0.69
CTDSP1-204ENST00000443891 ATN1P54259 1190 aaPredicted RBP19.39■□□□□ 0.69
CTDSP1-204ENST00000443891 PRAMEF19Q5SWL8 479 aa19.39■□□□□ 0.69
CTDSP1-204ENST00000443891 STK11IPQ8N1F8 1099 aa19.39■□□□□ 0.69
CTDSP1-204ENST00000443891 CHURC1Q8WUH1 139 aa19.39■□□□□ 0.69
CTDSP1-204ENST00000443891 LRCH3Q96II8 777 aa19.39■□□□□ 0.69
CTDSP1-204ENST00000443891 SEC62Q99442 399 aaKnown RBP19.39■□□□□ 0.69
CTDSP1-204ENST00000443891 NUP88Q99567 741 aaPredicted RBP19.39■□□□□ 0.69
CTDSP1-204ENST00000443891 XPNPEP3Q9NQH7 507 aa19.39■□□□□ 0.69
CTDSP1-204ENST00000443891 PHF24Q9UPV7 400 aa19.39■□□□□ 0.69
CTDSP1-204ENST00000443891 ZNF865P0CJ78 1059 aaPredicted RBP19.38■□□□□ 0.69
CTDSP1-204ENST00000443891 BMP3P12645 472 aa19.38■□□□□ 0.69
CTDSP1-204ENST00000443891 TFAP4Q01664 338 aa19.38■□□□□ 0.69
CTDSP1-204ENST00000443891 FAM47AQ5JRC9 791 aa19.38■□□□□ 0.69
CTDSP1-204ENST00000443891 ANKRD45Q5TZF3 282 aa19.38■□□□□ 0.69
CTDSP1-204ENST00000443891 FAM160B2Q86V87 743 aa19.38■□□□□ 0.69
CTDSP1-204ENST00000443891 OTUD7AQ8TE49 926 aaPredicted RBP19.38■□□□□ 0.69
CTDSP1-204ENST00000443891 GMCL1Q96IK5 515 aa19.38■□□□□ 0.69
CTDSP1-204ENST00000443891 TSEN34Q9BSV6 310 aaKnown RBP19.38■□□□□ 0.69
CTDSP1-204ENST00000443891 HELLSQ9NRZ9 838 aa19.38■□□□□ 0.69
CTDSP1-204ENST00000443891 ANAPC4Q9UJX5 808 aa19.38■□□□□ 0.69
CTDSP1-204ENST00000443891 STAT2P52630 851 aa19.37■□□□□ 0.69
CTDSP1-204ENST00000443891 MDM2Q00987 491 aaPredicted RBP19.37■□□□□ 0.69
CTDSP1-204ENST00000443891 ALX1Q15699 326 aa19.37■□□□□ 0.69
CTDSP1-204ENST00000443891 SLFN13Q68D06 897 aa19.37■□□□□ 0.69
CTDSP1-204ENST00000443891 KIFC2Q96AC6 838 aa19.37■□□□□ 0.69
CTDSP1-204ENST00000443891 FAM184BQ9ULE4 1060 aa19.37■□□□□ 0.69
CTDSP1-204ENST00000443891 ATP11BQ9Y2G3 1177 aa19.37■□□□□ 0.69
CTDSP1-204ENST00000443891 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.37■□□□□ 0.69
CTDSP1-204ENST00000443891 ADCYAP1R1P41586 468 aa19.36■□□□□ 0.69
CTDSP1-204ENST00000443891 TKFCQ3LXA3 575 aa19.36■□□□□ 0.69
CTDSP1-204ENST00000443891 ANO1Q5XXA6 986 aa19.36■□□□□ 0.69
CTDSP1-204ENST00000443891 CPXCR1Q8N123 301 aa19.36■□□□□ 0.69
CTDSP1-204ENST00000443891 RIPK3Q9Y572 518 aa19.36■□□□□ 0.69
CTDSP1-204ENST00000443891 COL11A1P12107 1806 aaPredicted RBP19.36■□□□□ 0.69
CTDSP1-204ENST00000443891 SZT2Q5T011 3432 aa19.36■□□□□ 0.69
CTDSP1-204ENST00000443891 TSPY2A6NKD2 308 aa19.35■□□□□ 0.69
CTDSP1-204ENST00000443891 PDE1AP54750 535 aa19.35■□□□□ 0.69
CTDSP1-204ENST00000443891 FAM109BQ6ICB4 259 aaPredicted RBP19.35■□□□□ 0.69
CTDSP1-204ENST00000443891 LRRC47Q8N1G4 583 aaKnown RBP19.35■□□□□ 0.69
CTDSP1-204ENST00000443891 ANKRD35Q8N283 1001 aa19.35■□□□□ 0.69
CTDSP1-204ENST00000443891 STAG1Q8WVM7 1258 aa19.35■□□□□ 0.69
CTDSP1-204ENST00000443891 RAVER2Q9HCJ3 691 aaKnown RBP19.35■□□□□ 0.69
CTDSP1-204ENST00000443891 ZNFX1Q9P2E3 1918 aaKnown RBP19.35■□□□□ 0.69
CTDSP1-204ENST00000443891 MOXD2PA6NHM9 499 aa19.34■□□□□ 0.69
CTDSP1-204ENST00000443891 TMEM232C9JQI7 657 aa19.34■□□□□ 0.69
CTDSP1-204ENST00000443891 ORC4O43929 436 aa19.34■□□□□ 0.69
CTDSP1-204ENST00000443891 FGRP09769 529 aa19.34■□□□□ 0.69
CTDSP1-204ENST00000443891 SLC1A4P43007 532 aa19.34■□□□□ 0.69
CTDSP1-204ENST00000443891 NOVP48745 357 aa19.34■□□□□ 0.69
CTDSP1-204ENST00000443891 CRBNQ96SW2 442 aa19.34■□□□□ 0.69
CTDSP1-204ENST00000443891 ABHD16BQ9H3Z7 469 aa19.34■□□□□ 0.69
CTDSP1-204ENST00000443891 TACC3Q9Y6A5 838 aa19.34■□□□□ 0.69
CTDSP1-204ENST00000443891 ZMYM6O95789 1325 aa19.33■□□□□ 0.69
CTDSP1-204ENST00000443891 DUSP11O75319 330 aaKnown RBP19.33■□□□□ 0.68
CTDSP1-204ENST00000443891 SNAI1O95863 264 aaPredicted RBP19.33■□□□□ 0.68
CTDSP1-204ENST00000443891 MYCNP04198 464 aaPredicted RBP19.33■□□□□ 0.68
CTDSP1-204ENST00000443891 TAL1P17542 331 aaPredicted RBP19.33■□□□□ 0.68
CTDSP1-204ENST00000443891 TRIM60Q495X7 471 aa19.33■□□□□ 0.68
CTDSP1-204ENST00000443891 RCSD1Q6JBY9 416 aa19.33■□□□□ 0.68
CTDSP1-204ENST00000443891 DEFB123Q8N688 67 aa19.33■□□□□ 0.68
CTDSP1-204ENST00000443891 NUP133Q8WUM0 1156 aa19.33■□□□□ 0.68
CTDSP1-204ENST00000443891 ACAD9Q9H845 621 aa19.33■□□□□ 0.68
CTDSP1-204ENST00000443891 STX8Q9UNK0 236 aa19.33■□□□□ 0.68
CTDSP1-204ENST00000443891 FOXP2O15409 715 aa19.32■□□□□ 0.68
CTDSP1-204ENST00000443891 ADAMTS4O75173 837 aa19.32■□□□□ 0.68
CTDSP1-204ENST00000443891 PCP11498 1178 aaKnown RBP19.32■□□□□ 0.68
CTDSP1-204ENST00000443891 CST5P28325 142 aaPredicted RBP19.32■□□□□ 0.68
CTDSP1-204ENST00000443891 NT5C2P49902 561 aa19.32■□□□□ 0.68
CTDSP1-204ENST00000443891 ACVR2BQ13705 512 aa19.32■□□□□ 0.68
CTDSP1-204ENST00000443891 MCMDC2Q4G0Z9 681 aa19.32■□□□□ 0.68
CTDSP1-204ENST00000443891 TOX2Q96NM4 488 aa19.32■□□□□ 0.68
CTDSP1-204ENST00000443891 SPC25Q9HBM1 224 aa19.32■□□□□ 0.68
CTDSP1-204ENST00000443891 LAMA3Q16787 3333 aa19.31■□□□□ 0.68
CTDSP1-204ENST00000443891 MYH4Q9Y623 1939 aa19.31■□□□□ 0.68
CTDSP1-204ENST00000443891 PGK1P00558 417 aa19.31■□□□□ 0.68
CTDSP1-204ENST00000443891 PCSK9Q8NBP7 692 aaKnown RBP19.31■□□□□ 0.68
CTDSP1-204ENST00000443891 KLHDC9Q8NEP7 349 aa19.31■□□□□ 0.68
CTDSP1-204ENST00000443891 FERMT2Q96AC1 680 aa19.31■□□□□ 0.68
CTDSP1-204ENST00000443891 PDLIM7Q9NR12 457 aa19.31■□□□□ 0.68
CTDSP1-204ENST00000443891 TCP11L1Q9NUJ3 509 aa19.31■□□□□ 0.68
CTDSP1-204ENST00000443891 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.31■□□□□ 0.68
CTDSP1-204ENST00000443891 PLXNA1Q9UIW2 1896 aa19.31■□□□□ 0.68
CTDSP1-204ENST00000443891 A0A1W2PQ45 241 aaPredicted RBP19.3■□□□□ 0.68
CTDSP1-204ENST00000443891 A0A1W2PQY0 241 aa19.3■□□□□ 0.68
CTDSP1-204ENST00000443891 ASB14A6NK59 587 aa19.3■□□□□ 0.68
CTDSP1-204ENST00000443891 MCCP23508 829 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms