RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 NPY5RQ15761 445 aa17.35■□□□□ 0.37
AP1S3-206ENST00000443700 CCDC152Q4G0S7 254 aa17.35■□□□□ 0.37
AP1S3-206ENST00000443700 CCDC70Q6NSX1 233 aa17.35■□□□□ 0.37
AP1S3-206ENST00000443700 RUBCNQ92622 972 aa17.35■□□□□ 0.37
AP1S3-206ENST00000443700 FAM204AQ9H8W3 233 aa17.35■□□□□ 0.37
AP1S3-206ENST00000443700 EFCC1Q9HA90 598 aa17.35■□□□□ 0.37
AP1S3-206ENST00000443700 CAPN11Q9UMQ6 739 aa17.35■□□□□ 0.37
AP1S3-206ENST00000443700 ZBTB1Q9Y2K1 713 aa17.35■□□□□ 0.37
AP1S3-206ENST00000443700 BAZ2AQ9UIF9 1905 aaKnown RBP17.35■□□□□ 0.37
AP1S3-206ENST00000443700 SLIT2O94813 1529 aa17.34■□□□□ 0.37
AP1S3-206ENST00000443700 BCL9O00512 1426 aa17.34■□□□□ 0.37
AP1S3-206ENST00000443700 RNF40O75150 1001 aa17.34■□□□□ 0.37
AP1S3-206ENST00000443700 CALML3P27482 149 aa17.34■□□□□ 0.37
AP1S3-206ENST00000443700 EVA1CP58658 441 aa17.34■□□□□ 0.37
AP1S3-206ENST00000443700 NLRP5P59047 1200 aa17.34■□□□□ 0.37
AP1S3-206ENST00000443700 TROAPQ12815 778 aa17.34■□□□□ 0.37
AP1S3-206ENST00000443700 KIAA1328Q86T90 577 aa17.34■□□□□ 0.37
AP1S3-206ENST00000443700 SDR42E1Q8WUS8 393 aa17.34■□□□□ 0.37
AP1S3-206ENST00000443700 STAMQ92783 540 aa17.34■□□□□ 0.37
AP1S3-206ENST00000443700 NUP58Q9BVL2 599 aa17.34■□□□□ 0.37
AP1S3-206ENST00000443700 ZNHIT6Q9NWK9 470 aaKnown RBP17.34■□□□□ 0.37
AP1S3-206ENST00000443700 REXO2Q9Y3B8 237 aaKnown RBP17.34■□□□□ 0.37
AP1S3-206ENST00000443700 TTC26A0AVF1 554 aa17.33■□□□□ 0.37
AP1S3-206ENST00000443700 WNT7AO00755 349 aa17.33■□□□□ 0.37
AP1S3-206ENST00000443700 FGRP09769 529 aa17.33■□□□□ 0.37
AP1S3-206ENST00000443700 SCG2P13521 617 aa17.33■□□□□ 0.37
AP1S3-206ENST00000443700 DNM2P50570 870 aa17.33■□□□□ 0.37
AP1S3-206ENST00000443700 BCAMP50895 628 aa17.33■□□□□ 0.37
AP1S3-206ENST00000443700 CCDC122Q5T0U0 273 aa17.33■□□□□ 0.37
AP1S3-206ENST00000443700 ADSSL1Q8N142 457 aa17.33■□□□□ 0.37
AP1S3-206ENST00000443700 RETREG2Q8NC44 543 aa17.33■□□□□ 0.37
AP1S3-206ENST00000443700 GNL3LQ9NVN8 582 aaKnown RBP17.33■□□□□ 0.37
AP1S3-206ENST00000443700 MYH1P12882 1939 aa17.33■□□□□ 0.37
AP1S3-206ENST00000443700 MAST2Q6P0Q8 1798 aa17.33■□□□□ 0.37
AP1S3-206ENST00000443700 RNF225M0QZC1 329 aaPredicted RBP17.33■□□□□ 0.36
AP1S3-206ENST00000443700 PSMA7O14818 248 aa17.33■□□□□ 0.36
AP1S3-206ENST00000443700 ABL1P00519 1130 aa17.33■□□□□ 0.36
AP1S3-206ENST00000443700 PRCPP42785 496 aa17.33■□□□□ 0.36
AP1S3-206ENST00000443700 MEA1Q16626 185 aa17.33■□□□□ 0.36
AP1S3-206ENST00000443700 PIK3AP1Q6ZUJ8 805 aa17.33■□□□□ 0.36
AP1S3-206ENST00000443700 CCDC170Q8IYT3 715 aa17.33■□□□□ 0.36
AP1S3-206ENST00000443700 JAKMIP2Q96AA8 810 aa17.33■□□□□ 0.36
AP1S3-206ENST00000443700 IQCDQ96DY2 449 aa17.33■□□□□ 0.36
AP1S3-206ENST00000443700 CHP1Q99653 195 aa17.33■□□□□ 0.36
AP1S3-206ENST00000443700 TSGA10Q9BZW7 698 aa17.33■□□□□ 0.36
AP1S3-206ENST00000443700 LCMT1Q9UIC8 334 aa17.33■□□□□ 0.36
AP1S3-206ENST00000443700 HPCAL4Q9UM19 191 aa17.33■□□□□ 0.36
AP1S3-206ENST00000443700 XIRP1Q702N8 1843 aaKnown RBP17.32■□□□□ 0.36
AP1S3-206ENST00000443700 CASZ1Q86V15 1759 aa17.32■□□□□ 0.36
AP1S3-206ENST00000443700 MCM7P33993 719 aa17.32■□□□□ 0.36
AP1S3-206ENST00000443700 PPP1R2P41236 205 aa17.32■□□□□ 0.36
AP1S3-206ENST00000443700 HERVK_113P62684 666 aa17.32■□□□□ 0.36
AP1S3-206ENST00000443700 PFKFB3Q16875 520 aaPredicted RBP17.32■□□□□ 0.36
AP1S3-206ENST00000443700 COG1Q8WTW3 980 aa17.32■□□□□ 0.36
AP1S3-206ENST00000443700 RIOK1Q9BRS2 568 aaKnown RBP17.32■□□□□ 0.36
AP1S3-206ENST00000443700 CRACR2AQ9BSW2 395 aa17.32■□□□□ 0.36
AP1S3-206ENST00000443700 DISC1Q9NRI5 854 aa17.32■□□□□ 0.36
AP1S3-206ENST00000443700 ZNF804BA4D1E1 1349 aa17.31■□□□□ 0.36
AP1S3-206ENST00000443700 hCG_1642624A0A1W2PR95 340 aa17.31■□□□□ 0.36
AP1S3-206ENST00000443700 TFRCP02786 760 aaKnown RBP17.31■□□□□ 0.36
AP1S3-206ENST00000443700 MAGEA9P43362 315 aa17.31■□□□□ 0.36
AP1S3-206ENST00000443700 PARP10Q53GL7 1025 aa17.31■□□□□ 0.36
AP1S3-206ENST00000443700 FAM114A1Q8IWE2 563 aa17.31■□□□□ 0.36
AP1S3-206ENST00000443700 CAGE1Q8TC20 777 aa17.31■□□□□ 0.36
AP1S3-206ENST00000443700 ZNF507Q8TCN5 953 aa17.31■□□□□ 0.36
AP1S3-206ENST00000443700 CCDC47Q96A33 483 aaKnown RBP17.31■□□□□ 0.36
AP1S3-206ENST00000443700 TRIM47Q96LD4 638 aa17.31■□□□□ 0.36
AP1S3-206ENST00000443700 MTRQ99707 1265 aa17.31■□□□□ 0.36
AP1S3-206ENST00000443700 FAM107BQ9H098 131 aa17.31■□□□□ 0.36
AP1S3-206ENST00000443700 MAGEF1Q9HAY2 307 aa17.31■□□□□ 0.36
AP1S3-206ENST00000443700 GDAQ9Y2T3 454 aa17.31■□□□□ 0.36
AP1S3-206ENST00000443700 EIF3CLB5ME19 914 aaKnown RBP17.3■□□□□ 0.36
AP1S3-206ENST00000443700 ORC4O43929 436 aa17.3■□□□□ 0.36
AP1S3-206ENST00000443700 COBLO75128 1261 aa17.3■□□□□ 0.36
AP1S3-206ENST00000443700 PPFIA4O75335 1185 aa17.3■□□□□ 0.36
AP1S3-206ENST00000443700 ATP1A1P05023 1023 aaKnown RBP17.3■□□□□ 0.36
AP1S3-206ENST00000443700 LRRC31Q6UY01 552 aa17.3■□□□□ 0.36
AP1S3-206ENST00000443700 BRINP3Q76B58 766 aa17.3■□□□□ 0.36
AP1S3-206ENST00000443700 FNBP4Q8N3X1 1017 aaPredicted RBP17.3■□□□□ 0.36
AP1S3-206ENST00000443700 EIF3CQ99613 913 aaKnown RBP17.3■□□□□ 0.36
AP1S3-206ENST00000443700 SH3GLB2Q9NR46 395 aa17.3■□□□□ 0.36
AP1S3-206ENST00000443700 EXOC1Q9NV70 894 aa17.3■□□□□ 0.36
AP1S3-206ENST00000443700 PES1O00541 588 aaKnown RBP17.3■□□□□ 0.36
AP1S3-206ENST00000443700 PRPF6O94906 941 aaKnown RBP17.3■□□□□ 0.36
AP1S3-206ENST00000443700 SRGNP10124 158 aa17.3■□□□□ 0.36
AP1S3-206ENST00000443700 KIF5BP33176 963 aa17.3■□□□□ 0.36
AP1S3-206ENST00000443700 NT5C2P49902 561 aa17.3■□□□□ 0.36
AP1S3-206ENST00000443700 ADGRA1Q86SQ6 560 aa17.3■□□□□ 0.36
AP1S3-206ENST00000443700 SMARCC1Q92922 1105 aaPredicted RBP17.3■□□□□ 0.36
AP1S3-206ENST00000443700 MMS19Q96T76 1030 aa17.3■□□□□ 0.36
AP1S3-206ENST00000443700 CUEDC2Q9H467 287 aa17.3■□□□□ 0.36
AP1S3-206ENST00000443700 TRIM10Q9UDY6 481 aa17.3■□□□□ 0.36
AP1S3-206ENST00000443700 ABCF2Q9UG63 623 aa17.3■□□□□ 0.36
AP1S3-206ENST00000443700 RSPH14Q9UHP6 348 aa17.3■□□□□ 0.36
AP1S3-206ENST00000443700 KIAA1551Q9HCM1 1747 aa17.29■□□□□ 0.36
AP1S3-206ENST00000443700 BICDL2A1A5D9 508 aa17.29■□□□□ 0.36
AP1S3-206ENST00000443700 TRIM66O15016 1216 aa17.29■□□□□ 0.36
AP1S3-206ENST00000443700 PHACTR2O75167 634 aa17.29■□□□□ 0.36
AP1S3-206ENST00000443700 RHOBTB3O94955 611 aa17.29■□□□□ 0.36
AP1S3-206ENST00000443700 SYF2O95926 243 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms