RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ITIH6Q6UXX5 1313 aa5.56□□□□□ -1.52
HERC1-201ENST00000443617 BICDL2A1A5D9 508 aa5.56□□□□□ -1.52
HERC1-201ENST00000443617 SASH1O94885 1247 aa5.56□□□□□ -1.52
HERC1-201ENST00000443617 ADAMTS12P58397 1594 aa5.56□□□□□ -1.52
HERC1-201ENST00000443617 FAM237AA0A1B0GTK4 181 aa5.56□□□□□ -1.52
HERC1-201ENST00000443617 SRRM3A6NNA2 597 aaPredicted RBP5.56□□□□□ -1.52
HERC1-201ENST00000443617 B4DLN1 442 aa5.56□□□□□ -1.52
HERC1-201ENST00000443617 RXRAP19793 462 aa5.56□□□□□ -1.52
HERC1-201ENST00000443617 EHHADHQ08426 723 aa5.56□□□□□ -1.52
HERC1-201ENST00000443617 CATIPQ7Z7H3 387 aa5.56□□□□□ -1.52
HERC1-201ENST00000443617 TBC1D1Q86TI0 1168 aaPredicted RBP5.56□□□□□ -1.52
HERC1-201ENST00000443617 FOXP1Q9H334 677 aaPredicted RBP5.56□□□□□ -1.52
HERC1-201ENST00000443617 RGL1Q9NZL6 768 aa5.56□□□□□ -1.52
HERC1-201ENST00000443617 A0A087WZG4 1122 aa5.56□□□□□ -1.52
HERC1-201ENST00000443617 PPP1R3GB7ZBB8 358 aa5.56□□□□□ -1.52
HERC1-201ENST00000443617 CEP104O60308 925 aa5.56□□□□□ -1.52
HERC1-201ENST00000443617 MB21D1Q8N884 522 aa5.56□□□□□ -1.52
HERC1-201ENST00000443617 ABTB2Q8N961 1025 aa5.56□□□□□ -1.52
HERC1-201ENST00000443617 CCDC26Q8TAB7 109 aa5.56□□□□□ -1.52
HERC1-201ENST00000443617 CHP1Q99653 195 aa5.56□□□□□ -1.52
HERC1-201ENST00000443617 CAPN11Q9UMQ6 739 aa5.56□□□□□ -1.52
HERC1-201ENST00000443617 FBXL16Q8N461 479 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 SPDYE1Q8NFV5 336 aaPredicted RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 ECT2Q9H8V3 914 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 LRRIQ1Q96JM4 1722 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 FANCAO15360 1455 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 LRRC10BA6NIK2 292 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 CREB3O43889 395 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 CXCR5P32302 372 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 FXR1P51114 621 aaKnown RBP eCLIP5.55□□□□□ -1.52
HERC1-201ENST00000443617 NRXN1Q9ULB1 1477 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 ZPR1O75312 459 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 CTNNA1P35221 906 aaKnown RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 LMOD2Q6P5Q4 547 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 CDKAL1Q5VV42 579 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 NFRKBQ6P4R8 1299 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 SMARCAL1Q9NZC9 954 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 SH2B2O14492 632 aaPredicted RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 CUL4BQ13620 913 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 TMTC2Q8N394 836 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 SELENOSQ9BQE4 189 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 LACRTQ9GZZ8 138 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 V9GY48 417 aaPredicted RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 NEURL1BA8MQ27 555 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 AGPSO00116 658 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 IDH1O75874 414 aaKnown RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 CLSTN1O94985 981 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 RAPGEF3O95398 923 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 PARP1P09874 1014 aaKnown RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 MAGOHP61326 146 aaKnown RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 FUKQ8N0W3 1084 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 MAGOHBQ96A72 148 aaKnown RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 RAB3IPQ96QF0 476 aaPredicted RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 OSBPL1AQ9BXW6 950 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 AATFQ9NY61 560 aaKnown RBP eCLIP5.55□□□□□ -1.52
HERC1-201ENST00000443617 ESYT3A0FGR9 886 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 RGS16O15492 202 aaPredicted RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 DNM2P50570 870 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 ITIH3Q06033 890 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 SYMPKQ92797 1274 aaKnown RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 LRRD1A4D1F6 860 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 CTNND1O60716 968 aaKnown RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 RASSF9O75901 435 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 ELF3P78545 371 aaPredicted RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 RASSF7Q02833 373 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 CDC37Q16543 378 aaPredicted RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 BZW1Q7L1Q6 419 aaKnown RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 TEX13AQ9BXU3 409 aaPredicted RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 KRT23Q9C075 422 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 YIPF3Q9GZM5 350 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 STK38LQ9Y2H1 464 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 RTN2O75298 545 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 MOCS3O95396 460 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 UBA7P41226 1012 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 SETDB1Q15047 1291 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 NBPF10Q6P3W6 841 aaKnown RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 CSGALNACT2Q8N6G5 542 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 TRIM7Q9C029 511 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 SUDS3Q9H7L9 328 aaPredicted RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 SMIM23A6NLE4 172 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 KRIT1O00522 736 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 FLOT1O75955 427 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 ZC3H6P61129 1189 aaKnown RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 DENND2CQ68D51 928 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 TTC5Q8N0Z6 440 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 ANKRD13CQ8N6S4 541 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 DHTKD1Q96HY7 919 aaPredicted RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 ANKRD27Q96NW4 1050 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 CCDC113Q9H0I3 377 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 GOPCQ9HD26 462 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 PLCB1Q9NQ66 1216 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 FAM207AQ9NSI2 230 aaPredicted RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 DUSP10Q9Y6W6 482 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 DNAJC8O75937 253 aaPredicted RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 PPP2R2AP63151 447 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 ASIC1P78348 528 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 CCDC57Q2TAC2 916 aa5.55□□□□□ -1.52
HERC1-201ENST00000443617 SAMD1Q6SPF0 538 aaPredicted RBP5.55□□□□□ -1.52
HERC1-201ENST00000443617 KCNV2Q8TDN2 545 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms